Momordica charantia (bitter melon): 111007070
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Entry
111007070 CDS
T05045
Name
(RefSeq) DNA mismatch repair protein MSH2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111007070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111007070
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111007070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
FadA
NARG2_C
ATG17_like
Motif
Other DBs
NCBI-GeneID:
111007070
NCBI-ProteinID:
XP_022134936
UniProt:
A0A6J1BZ63
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MVDNVDDQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT
YYRTTTALRQLGNGSEALSSVSVSKNMFESIVRDLLLERMDHTLELYEGSGSKWRLVKSG
SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLGYVDLSKRVMGMAEFLDDSH
FTNVESALVGLGCKECLLPLESGKFGDIKPLHDTLTKCGVMLTERKKSEFKMRDLVQDLS
RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYIMQKYNLDSYMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF
VEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRVPFIKNALENYEGQ
FSSLIKEKYLEFLEIWTDANHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ
ESIEQQILDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
TRKDGVKFTNTKLKKLGDQYQKIVEEYKSFQKELVQRVIETASSFIEVFSPLAELLSELD
VLLGFADLASSCPTPYSRPDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
FHELTALARANTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
EFANFPSSVVALAREKAAELEDFSTNTTISATIGEEQDVPKQSKRKREFSSDDMYKGVAR
ARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggttgacaatgtcgacgaccaaagcaagcttcctgagctcaaacttgatgctaagcag
gctcaagggtttctcgcattcttcaaaaccctaccccccgactcaagagctgttcgattt
tttgatcgtcgggattactacactgcccatggcgataatgcagttttcattgcaaagacc
tattaccgtactacaactgctttacgacaactgggtaatggatctgaagctctgtctagt
gtgagtgtcagcaaaaatatgtttgaatccattgttcgggatcttcttttggaaagaatg
gaccatacattggagctttatgagggtagcggttcgaagtggagactggtcaaaagtgga
tcacctggtaatattggcagttttgaagatgttttgttcgccaataatgaaatgcaggac
agccctgctatcgtggcactattgccgaacttccgagaaaatgggtgcattgtcggatta
ggttatgttgatttatcaaaaagagtgatggggatggctgaatttcttgacgacagccac
tttacaaatgtggagtcagctctggttggtcttggttgtaaggaatgccttctgcctcta
gagagtggaaagttcggtgatataaaacctctacatgacacactgacaaagtgtggtgtg
atgctgactgagaggaagaaatcagaatttaaaatgagagatttggtgcaggatctttca
aggctcgtcaaaggatctgttgaacctgtcagagatttggtatctggatttgaatttgca
cctgctgccttaggagcattgttggcttatgcagaattactggcagatgaaagcaattat
ggaaattatataatgcagaagtacaatcttgacagctacatgaggttagactctgctgcc
atgagagcattaaacgtcctagaaagtaaaactgatgcaaacaaaaacttcagcctgttt
ggtcttatgaatagaacctgtactgctggaatgggtaaaagattgttacatatgtggctg
aagcagcctctgttagatgttaaggaaattaattctagactggaccttgttcaagctttt
gtggaggatactgctctccgccaagatttgagacaacatctcaaaagaatctctgatatt
gagagattgacacactatcttgagaagagaagagctggtttgcagcacatcgttaaactt
tatcagtcaagtataagggttccatttattaagaatgccttggagaattatgaaggacaa
ttttcctcattgatcaaggaaaagtacttggaatttctcgagatatggactgacgccaat
cacctgaacaagttcaataatcttgtggaaactgctgttgatcttgatcagcttgagaat
ggagaatatatgatttcatctagttatgaccctgctctgtccaagttaaagaatgtgcaa
gaatcaattgagcagcaaatactcgacttgcacaggcaagttgctaatgatcttgatctt
ccagttgataaggccttgaagttagataaaggcacacaatttggacatgtttttagaatt
actaagaaagaagaaccaaaagtaaggaaaaagctctccacccatttcattgtccttgaa
acccgaaaggatggagtgaagtttacaaataccaagcttaaaaagctgggtgaccagtat
cagaaaatagtcgaggagtacaagagtttccagaaggagttggttcaacgtgttattgaa
actgcatcatccttcattgaggtattcagtcctttggcagagttgctctctgaattggat
gttttgcttggttttgctgatttagcttctagttgtcctactccttatagtagaccagac
atcacttcatcggatgaaggagatattatattggaaggaagtaggcacccctgcgtggag
gctcaagactgggttaatttcataccaaatgattgcaaactagtaagggggaaaagttgg
ttccaaatcatcactgggcctaatatgggtggaaaatctacatttatccgacaggttgga
gtgaacattctaatggcacaagtaggttgttttgttccctgtgacaaagctagcatttct
gttcgtgattgcatttttgctcgcgtaggtgcaggggactgtcaacttcgtggagtttct
acgtttatgcaagagatgcttgaaactgcatctatattgaaaggagctacagagaaatcc
ttgataatcattgatgaattgggccgtgggacatccacttatgatgggtttggtttagca
tgggccatttgtgaacatcttgttgaagtgattaaagcacccactttatttgcaacccac
ttccatgaactaactgcattagctcgtgccaatactgatcttgagccccatggaaagcaa
attgttggtgtggcaaattttcatgtcagtgcacacatagactcatcaaatcacaagttg
acaatgctatacaaggttgaacctggagcttgtgatcaaagctttgggattcatgtagca
gaatttgcaaattttccttctagtgttgtggcacttgccagagaaaaggctgctgaactg
gaagatttctctactaacacaactatttcagccactattggagaagagcaagatgtaccc
aagcaatcgaagcgtaaacgagagtttagttcagatgacatgtacaaaggtgtggcgcgg
gctcgccagtttctagaggagttttccaacctgccattggataagatggatctgaaggaa
gctctgcaacaagtgagccaattacgggatggtctgaagaaggatgccgtggactctaac
tggctccaacagttcctttag
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