Momordica charantia (bitter melon): 111007117
Help
Entry
111007117 CDS
T05045
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03440
Homologous recombination
mcha03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111007117
03460 Fanconi anemia pathway
111007117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111007117
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
111007117
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
111007117
FA (Fanconi anemia) pathway
Downstream FA components
111007117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
Pex19
Motif
Other DBs
NCBI-GeneID:
111007117
NCBI-ProteinID:
XP_022135012
UniProt:
A0A6J1C1F9
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
MVYAKVGTNPKSKANQTSKLTKNVYPIGGIQVEFPYRPYGSQLAFMGRVISTLDRAQREG
HCHALLESPTGTGKSLSLLCSSLAWQKSYKLKSQDANSCQSKPAPEAATDPLAFGGGFIP
EVQPSMSVNTESSHPAPNNKSQKKKTTPTIYYASRTHSQISQVIREYRKTTYRVPMAVLA
SRKHFCTNPYVRGKENIDEECKLLLKDQDAGCCEFKNANKVKSHPTLQKGGCHEVHDIED
LVKVGEIVKGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMDVDIKGAIVILDEAHNIE
DIARHAGSVDVEEDTLNKLQMELDQLCHTDSLVYQPLYEMTQDLISWIDQRKTTLQKREF
QHYVTCWTGNHAQRELQEANITQQCFPILLECATKAIKAASDTESDTAHLSGLSVITLEG
LFSSLTYFFSRNGCHMSDYQLALQRYVKRDPGKVYVEWTHTLSLWCLNPAVVFRDIADLS
LSVILTSGTLSPMNSFSSELGVQFGTSLEAPHVIDVESQVWPAIISTGPGNYPLNGSYKT
ADGYAFQDALGKSLEEIFLIAPGGCLVFFPSYKLMEKLQNRWSETGQWSRLNARKSLFVE
PRGGSQEDFDSILKGYYDTIRLGDNFAVGKKRRGKKVRPNYPCVTGCENPKEGAAFFAVF
RGKVSEGIDFSDDNARVVIIVGIPFPNINDIQVSLKKKFNDTYKLSKNLLSGNEWYCQQA
FRALNQAAGRCIRHKFDYGAIILLDERFQEERNRTYISKWLRKSVKQCDNFELSMEGLKS
FFGNIKERINKSTESDLQKSENEEHITSTDPSSFRRKEIEKLDKLNYCGQKVYTKIMKYD
SPFSQLKSQGDVEVQASFQAREDAKNCIIDLECCVEEDTRNHEFLSMTTVLEVPDSPIVQ
ETPCVDVGGVTSPGDSKDGRSSSTIIEAYSEFPDQLSIYSLPLTKSIKSTLTSETSMLHT
PERNVSSNGYSFGPEIESSLNMSVNSHTQKRRKSVGLTIAKFVQEESAVDPKTKTPECNS
VDRGSIISRNSNSLKDISYEILPTEKKSKSSNVPQLLKLNDSIPVCPSSGPPLDKTLHLS
CVLCRSPLGRPENHSYVTCSFTMSSKTHLISIYKERLKPQTANSSSIPVLMTDIMFVNQP
LLVRASKDAGCGIWSKEDGCVFNCVFCPFCPTDNCIGVQIMATDASNIQLLNKVMFYLEC
LEIQDLEAHTGKASLNTELLPVSSSAKKKLAVLEPIEKFSYSPGPLTSGGWRSTKLKARR
KATS
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggtatatgcaaaagtggggacgaaccctaaatccaaggctaatcagacttctaagctc
acgaagaatgtgtatccgatcggtggcatccaagtggaattcccataccggccatacggt
tcgcagctcgcattcatgggcagagttatatcaacccttgatcgagcccagcgggagggc
cattgccacgcattgctggagtctccgactggaactgggaagtcgctttcgcttctgtgt
tcgagtctcgcttggcagaagagctacaaattaaaaagtcaggatgctaattcctgtcag
tcgaagcccgctccagaggctgcgactgatcctctcgcttttggcggtggatttattccc
gaagtgcagccgtcaatgtctgtaaatacggagtcatctcatccagcgccaaacaacaaa
agtcagaagaaaaagacaaccccaactatatactatgcctcgaggacacattcacagata
tcacaagtgatccgtgagtatagaaagactacttatcgagtgcccatggcagtgttggca
tcaaggaaacatttctgcacaaatccttatgtacgagggaaagagaatatagatgaagaa
tgcaaactattattgaaggatcaggatgcaggatgctgtgaatttaaaaatgcaaacaag
gtcaaaagtcatccaacccttcagaaaggaggttgtcatgaggttcacgacattgaggat
ttggtgaaagttggagaaattgtaaaaggttgttcatattatgcagctcgatctatggca
gatgatgcacagctggtgttttgcccatatagctatattatcaatccagttattcgagga
gcaatggatgtagatattaagggtgccattgtgatccttgacgaagcccacaatatagag
gatattgctcgtcatgctggtagtgtggatgtcgaagaggatactttaaataaattgcag
atggaattagatcaactatgtcatactgattctttggtataccagccactgtatgagatg
acacaggatctcataagttggattgatcagaggaagaccacactacagaagcgtgagttt
cagcattatgtcacctgttggaccggcaatcatgctcaaagagagctccaagaagctaat
ataactcaacaatgcttcccaattttgcttgaatgtgcaacgaaggcaattaaagcagct
tcagatacggagtctgatactgcacatttgagtggcctgtcagtgataacgctggaaggg
ttattttcttcattgacgtattttttctcaagaaatggttgccacatgtcagattaccag
cttgcattacaacgctatgttaaaagagatcctggaaaagtttatgttgaatggacgcat
actttaagtttgtggtgcttgaatccagctgtcgtatttagagacatcgccgatctttcg
ttatcagttatcttaacatctgggaccctgtcacctatgaattccttttcatctgaacta
ggagttcagttcggaacttcactggaagctcctcatgtaattgacgtggaatctcaggtc
tggccagctattatatcaactggtccaggaaactatccactgaatggaagttataaaaca
gctgatggatatgcattccaggatgctctaggaaaatctttggaggagatatttttgatc
gctcctggtggctgtcttgtgttcttccctagttacaagctgatggagaaactccaaaat
cgttggtctgaaactggtcaatggtctcgactgaatgcaaggaagtccctttttgttgag
ccaagaggaggaagtcaagaggattttgattccattttgaaaggttattatgataccata
cgtcttggtgataactttgcagtcgggaagaagagacgaggtaagaaggttagacccaat
tacccgtgtgtgactggctgtgaaaatcccaaggaaggtgcggcattctttgcagttttc
cgaggaaaggtctcagaaggaatagacttttctgatgataatgctagagtggttataatt
gttggaattccatttccaaatataaacgatattcaagtttcattaaaaaagaagttcaat
gacacatataaactgtccaaaaatcttttaagtggaaatgagtggtactgtcaacaggcc
ttccgagctttaaatcaagctgcaggacgttgtattcgacacaagtttgactatggtgcc
ataatcttattagatgagcgtttccaggaagagaggaacaggacgtacatttcaaagtgg
ctaagaaaatctgttaaacaatgtgataactttgaactgtcaatggaggggctgaaatcc
tttttcggcaacataaaggagcgcattaacaagagtacagaaagtgacttgcagaaatct
gagaatgaggaacacatcacttccacagaccctagtagttttagaagaaaagagattgag
aaacttgacaagttaaattattgtgggcagaaagtttatacaaaaataatgaagtatgac
tcccctttttctcaactgaaatctcaaggtgacgttgaagttcaagcttcttttcaggct
cgtgaggatgctaaaaactgcataattgatctggagtgctgtgttgaagaggacacgagg
aaccatgagtttctatctatgacaaccgtcctcgaagttccagattcaccaattgtgcag
gagactccttgtgttgatgttggaggtgtcactagtccaggagactccaaagatggaaga
tcaagttcaaccataatcgaggcctattctgagtttcctgatcaattatctatttattca
ttacctttaaccaaatcaataaagtctactcttacgtccgaaacttcaatgctacatact
cctgaaagaaatgtttcttcaaatggctacagctttggaccagaaatagaatcttctttg
aatatgagtgtaaattcccatacccagaaaaggaggaagtctgtgggtttaacaattgcg
aaatttgttcaagaagagtctgctgttgatcccaaaaccaaaactcccgaatgcaatagt
gtggacagaggctcaataatcagcagaaattcaaatagcctaaaagatattagttatgag
attcttcccacagaaaagaagtctaagagttcaaatgttccacaactactcaagctgaat
gactccattcctgtttgtccgtcttctggccctcctttggacaaaacgttgcatctgtct
tgtgtactttgtagaagcccattgggccgtccggaaaaccattcatatgtgacgtgctca
tttacaatgtcatcaaaaacacacttaatatctatatacaaggaaaggttgaagcctcaa
actgccaattcatcaagtataccagttcttatgacagacatcatgtttgttaaccagccg
ctcctagttagggcttcaaaagatgcaggatgtggtatctggagcaaggaggatggttgt
gtattcaattgtgtcttttgccccttctgccctactgacaattgtattggtgtacagatc
atggcaactgatgcgtcaaacattcagttacttaataaggtgatgttttacttggagtgt
ttggagatccaagatctagaagcacatacaggaaaggcttcactaaacacggagttatta
cctgttagtagctcagctaagaaaaagttggccgtcttggaacccattgaaaagttttca
tactcccctggcccgctaacctctggaggctggaggtctacaaaattgaaggccagaagg
aaagcaacgtcatag
DBGET
integrated database retrieval system
