Momordica charantia (bitter melon): 111007305
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Entry
111007305 CDS
T05045
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like isoform X1
KO
K07466
replication factor A1
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03030
DNA replication
mcha03420
Nucleotide excision repair
mcha03430
Mismatch repair
mcha03440
Homologous recombination
mcha03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111007305
03420 Nucleotide excision repair
111007305
03430 Mismatch repair
111007305
03440 Homologous recombination
111007305
03460 Fanconi anemia pathway
111007305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcha03000
]
111007305
03032 DNA replication proteins [BR:
mcha03032
]
111007305
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111007305
Transcription factors [BR:
mcha03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111007305
DNA replication proteins [BR:
mcha03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111007305
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111007305
MMR (mismatch excision repair)
111007305
DSBR (double strand breaks repair)
HR (homologous recombination)
111007305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Rhabdo_glycop_CD
Motif
Other DBs
NCBI-GeneID:
111007305
NCBI-ProteinID:
XP_022135311
UniProt:
A0A6J1C0B2
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MANTATVTSGAISKILANPSSDSPSDVPEIVVQVVDLDPKGNRYMFTASDGSAKLRGILP
SKFTSEVISGNIQHLGLIRILGYTLNDIPNKEEKYLIVTDCEVVSPALGMEVKTEVKKED
VGIVLKPKQEFDDNKSAPNTGAGILLKPKQELVTKSAAQIVHEQRTNMAPAARMSMTRRV
HPLVSLNPYHANWTIKARVTNKEKMRTYKNARGEGCVFNVELTDDDGTQIQATMFNEAAR
KFYEKFALGKVYYISKGTLKVANKQYNTVQNDYEMTLNENSEVDEVSNEAALIPKMKFNF
VKIDMLGTHVNGKDLVDVIGVVQSVSPTMSIRRKSNNDIAPKRDITIADETKKTVVISLW
NDLATNVGQELLDIADQSPVIALKYLRVGDFQGVSLSTISRSRVLINPDIPEAKHLRSWY
DSEGKAMSMASVSSGLSPSSKTGSRSMYSDRVSLSHILQGKSLGEEKPMFFSIRAYVSFI
KPDQTMWYRACKTCNKKVTEAIGSGYWCENCQKNDEECSLRYIMVVRVSDASGEAWLSTF
NEEAERLIGCSADELDQLKSQMGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRIT
VRSVAPVDFAAESRFLLEEIAKMKVP
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacacagcaacagtaacctccggtgcgatttcgaagatattggcaaatccgtcc
tcggactcgccctcggatgttccggagatcgtggttcaggtcgtcgatctcgatcccaag
gggaatcggtacatgtttactgctagcgatgggagtgcgaagctaagaggtattctccca
tccaaatttacgtctgaggttatctctggaaacattcaacatctgggtcttatccgtatt
cttggatacactctcaatgatatcccaaacaaggaagaaaagtatctaatcgtgacggat
tgtgaggtggtttctcctgctctaggaatggaagttaaaactgaggttaagaaagaggat
gtgggcattgttttgaaaccaaaacaagagtttgatgataacaagagtgcaccgaatacc
ggggctggtatccttttaaagccaaagcaagaattggttaccaaatcagcagctcaaatt
gtacacgagcagcgtacaaatatggcaccagctgcacggatgtccatgacaaggagagtt
catccccttgtttctttaaatccttatcacgcaaattggaccatcaaagcccgtgttaca
aacaaagaaaagatgcgtacatacaagaatgctcgaggagaaggttgcgttttcaatgtg
gagttgacagatgatgatggtacacaaatacaggctacgatgtttaatgaagctgcaagg
aagttctatgaaaaatttgcccttggcaaagtttattacatctctaagggaactttgaaa
gttgccaataagcagtataatacagttcaaaatgattacgaaatgactttaaatgagaat
tctgaagtggatgaggtcagcaatgaagctgctctcattcctaaaatgaaattcaatttt
gtcaagattgacatgttaggtactcacgtgaacgggaaggatcttgttgatgttattgga
gttgttcaaagtgtttcccctacgatgagcattcgaaggaaaagcaacaatgacatagct
ccaaaacgtgatataactattgccgatgagacgaagaagacagtcgtgatatctctgtgg
aatgatcttgcgaccaatgtggggcaggaactgcttgacattgctgatcaatctcccgta
attgcattgaaatatctcagagttggagattttcaaggtgtatctctgtcgacaataagt
aggagcagagttttgattaatccagacattccggaagctaaacatttgagatcctggtat
gattctgaaggaaaagccatgtccatggcttctgtcagctctggcctgagcccatcatcc
aagactgggtcgaggtccatgtattccgaccgtgtttccctgtctcatatactccaaggc
aaatcattgggtgaagaaaagccaatgttcttcagcattagagcatatgttagctttatt
aagcctgatcaaacaatgtggtatcgtgcatgtaaaacatgcaacaagaaggtgactgaa
gcaattggatctggatattggtgtgaaaattgccagaaaaatgatgaagaatgcagttta
aggtacataatggttgtgagagtttctgatgcaagcggcgaagcttggctctctacattc
aacgaagaagcagagaggcttattggatgctctgctgatgagcttgaccagctcaaatca
cagatgggagaggagaattcatatcaattgaaactcaaagaagccacttgggttccccat
ttattccgggttagtgtttctcagaatgaatacaacaatgagaagagacaaaggatcact
gtcaggtctgttgctccagttgactttgctgctgaatccagattcttgctagaagagata
gcaaagatgaaagttccctaa
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integrated database retrieval system
