KEGG   Momordica charantia (bitter melon): 111007665
Entry
111007665         CDS       T05045                                 
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111007665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcha03019]
    111007665
Messenger RNA biogenesis [BR:mcha03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     111007665
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     111007665
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 111007665
NCBI-ProteinID: XP_022135788
UniProt: A0A6J1C1R4
LinkDB
Position
Unknown
AA seq 286 aa
MVGLSIGEKQFIQGGIAQDLRSDGRTRLTYRPISVETDVISQANGSARVKMGGTEVIAAV
KAELGRPNAMQPDKGKVSISVDCSPIAEPAFEGRGGEELSTELSVALQRCLLGGKSGAGA
GIDLSSLIVVEGKICWDLYIEGLVVSSNGNLLDTLGAAIKAALSNTGIPKVNVAAEASAD
DQPEVDISDEEFLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMNSAISISINRHGHIC
GVTKRGGAGVDPSIILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
NT seq 861 nt   +upstreamnt  +downstreamnt
atggtggggctttcaattggagagaagcaattcatacaaggcggtatcgcgcaggacctt
cgctctgatggtcgaacgagattaacttaccgacccatctctgtagaaactgatgtgatc
tctcaggccaatggttcagcaagggtcaaaatgggtggtactgaagttattgctgctgtg
aaggctgaacttggaaggccaaatgcaatgcagcctgacaaagggaaggtttcgatctct
gttgattgcagtccaattgcggaaccagcgttcgagggtagaggtggtgaagagttgtca
accgaactctcagtcgctcttcaacgatgtctcttaggtggaaaaagtggtgcaggggct
gggattgacctttcatctctgatagttgtggaaggaaagatttgttgggatctttatatt
gagggcctcgttgtaagctcaaacggcaatcttctagatacccttggcgctgccattaag
gctgctttgagcaatacaggcatcccaaaggtcaacgttgcagcggaagcatcagccgac
gaccagcccgaagttgacataagcgatgaagaatttctacagttcgacacatccggagtt
cccgtcatagtcacattgacaaaggtgggtaggcactatatcgtggatgccactttggaa
gaggagtctcagatgaactccgccatctccatatccatcaacaggcacggtcacatctgc
ggggtgaccaaacgagggggcgccggggtcgatccgagcataatcctcgacatgatatcc
gtgggcaaacatgtgagtgagcagttactgaacaagttggattcagagatagctgctgct
gaagctgatgaagaagaatga

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