Momordica charantia (bitter melon): 111007665
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Entry
111007665 CDS
T05045
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111007665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111007665
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111007665
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
111007665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111007665
NCBI-ProteinID:
XP_022135788
UniProt:
A0A6J1C1R4
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MVGLSIGEKQFIQGGIAQDLRSDGRTRLTYRPISVETDVISQANGSARVKMGGTEVIAAV
KAELGRPNAMQPDKGKVSISVDCSPIAEPAFEGRGGEELSTELSVALQRCLLGGKSGAGA
GIDLSSLIVVEGKICWDLYIEGLVVSSNGNLLDTLGAAIKAALSNTGIPKVNVAAEASAD
DQPEVDISDEEFLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMNSAISISINRHGHIC
GVTKRGGAGVDPSIILDMISVGKHVSEQLLNKLDSEIAAAEADEEE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtggggctttcaattggagagaagcaattcatacaaggcggtatcgcgcaggacctt
cgctctgatggtcgaacgagattaacttaccgacccatctctgtagaaactgatgtgatc
tctcaggccaatggttcagcaagggtcaaaatgggtggtactgaagttattgctgctgtg
aaggctgaacttggaaggccaaatgcaatgcagcctgacaaagggaaggtttcgatctct
gttgattgcagtccaattgcggaaccagcgttcgagggtagaggtggtgaagagttgtca
accgaactctcagtcgctcttcaacgatgtctcttaggtggaaaaagtggtgcaggggct
gggattgacctttcatctctgatagttgtggaaggaaagatttgttgggatctttatatt
gagggcctcgttgtaagctcaaacggcaatcttctagatacccttggcgctgccattaag
gctgctttgagcaatacaggcatcccaaaggtcaacgttgcagcggaagcatcagccgac
gaccagcccgaagttgacataagcgatgaagaatttctacagttcgacacatccggagtt
cccgtcatagtcacattgacaaaggtgggtaggcactatatcgtggatgccactttggaa
gaggagtctcagatgaactccgccatctccatatccatcaacaggcacggtcacatctgc
ggggtgaccaaacgagggggcgccggggtcgatccgagcataatcctcgacatgatatcc
gtgggcaaacatgtgagtgagcagttactgaacaagttggattcagagatagctgctgct
gaagctgatgaagaagaatga
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