Momordica charantia (bitter melon): 111007818
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Entry
111007818 CDS
T05045
Name
(RefSeq) serine/arginine-rich splicing factor SR45 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03013
Nucleocytoplasmic transport
mcha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111007818
03015 mRNA surveillance pathway
111007818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111007818
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111007818
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111007818
NCBI-ProteinID:
XP_022136021
UniProt:
A0A6J1C2C4
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MAKPSRGRRSPPSGSASGSSSRSRSFSGSDSRSSSRSRSRSRSVSVSRSRSRSRSNSSSS
SLSRSGSSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSR
NVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGYVEFKTRPDAEKAQVYMDGA
QIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGANAEKDDMKRQREPSPRRK
PPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIRGRSP
SPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRVRSPPRRSPVVRRRSRSPIRR
PARSRSRSFSPRRGRPAAAARRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSS
SSPPRKP
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccgagcagaggccgtcgctcgccgccgtcaggatccgcatcggggtcgtcc
tcacgttcccgctcattttccggctccgattcccgctccagttcgcgctcgcgctccagg
tctcggtctgtatctgtctcacgctctcgctctcgttccaggtcaaattcatcgtcttct
tctctctctcgcagtggcagttctcggagccggagcccgcctcctcagagaaagagtcct
actgaaacagctcggcggactcgtgcttcacctccaccagctaaacgaagttctccccca
cccaggaaaccttctcctgtacgcgagtcccttgttcttcacattgatgcacttagcagg
aatgtccatgagggtcatttaagagaaatattctgtaactttggcgaagtagtcaatgtt
gagctggcaatggatcgtacagtgagtttgcaccatgtcaatcttcctaaaggttatgga
tatgttgaattcaaaacgagacctgatgctgaaaaagcccaagtgtatatggatggtgct
caaattgatggaaatgttattagagtgagatttacattacctcaaagacagaagatgccg
actcctccaaggactgtggcgattgctccaaagagagatggtcccaagcctgaaaatgtt
ggtgctaatgctgagaaggatgacatgaaaagacagagagaaccttcacctcgtcgaaaa
cctccttcacctagaaggcgctcacctgtagctcgacgtggtgggtctccccctagaaga
caacccgattctccacgccgccgtccagagtctcctccacgccgccgtgtcgaatctcct
ttccgtcgtgattctccacctagaaggaggcctgcatcgccgattagaggccgttctcca
tcccctttgccaaggcgacatagatctcctccaaggccttctccaagaagaattcgtggc
agtcccgttcgaagacgttccccacctcctcctaggcgccgtacacctccaagacgagtt
cgtagtcctccgagaaggtctccagtagttcgtagacggagccgttcaccaattagaaga
cctgctcgttcacgttcccgatcattttcaccacgaagaggtcggccagcagctgctgct
agacgtgggagatcatcatcctactctgcatcacccagtccacgcaaggtagccaggagg
gtatctcgtagtccaagaaggccattgagagggagaagcagcagcaggagcagtagcagt
agttccccaccccgcaagccataa
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