KEGG   Momordica charantia (bitter melon): 111008268
Entry
111008268         CDS       T05045                                 
Name
(RefSeq) protein SEH1
  KO
K14299  nucleoporin SEH1
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111008268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcha03019]
    111008268
   04131 Membrane trafficking [BR:mcha04131]
    111008268
Messenger RNA biogenesis [BR:mcha03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111008268
Membrane trafficking [BR:mcha04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    111008268
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR35_TULP_N Beta-prop_EML WD40_Gbeta Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 111008268
NCBI-ProteinID: XP_022136602
UniProt: A0A6J1C5X6
LinkDB
Position
Unknown
AA seq 327 aa
MESAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA
ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS
SSGLKMIAAFSHCHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH
RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI
GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
GKDGMVRLWQSNLNGVWHQLAAFEPTS
NT seq 984 nt   +upstreamnt  +downstreamnt
atggagagtgctatggcgagcttcgataaaggcaccctctgctcagcttggaactactcc
gccagcagattagccaccgcctcggtcgacggaaccctcgtcatcttcgattcccccgat
ccttcttcttcatccacgtccctcactcgcacttcaaactttaaggcacatgaggctgcc
attttaaagatagtttgggttcctccagagtatggtgattcagttgcatgcatttgttca
gatggaacttcatcattgtgggaggaggttgttgaagatgcccagcctctacagtggaag
ctatgcaaacgctttaaaagtaattcagcccaaatgctagacatccaatttggaaattcg
tcctctggtctgaaaatgattgctgcattttcacattgccatgtaaaagtttatgagctt
atggatcctttggatttgaagaattggcaactccaggctgaatttcagaatgttattgat
tccatttctacggttaggaaagcttcttgcttatctgcaagtatatcttggaatccacat
cgaggtgaaagacaacaatcgagctttgttttggctttaaattctaatactccacagctt
aattctgccaaggtttgggagtttgatcaggctcatcaaagatggcttcctgttgcagag
ttggctttgcctgcagacaaaggcgatgaggtttatgctgttgcgtgggcacaaaatatt
ggaaggccatatgaggtaatagctgttgcaacccagaaaggtattgcaatatggcacctc
ggatccaatcctgacatggatggaaggctctcaacagaaagagttgctctgctttctggg
cataacggcgaggtgtgggagatggagtgggacatgggtggtatgacattagcatcaaca
ggaaaggacgggatggttcggttatggcaatccaacctcaatggtgtttggcaccaactt
gctgcatttgagcccacttcttaa

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