Momordica charantia (bitter melon): 111008817
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Entry
111008817 CDS
T05045
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111008817
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcha01002
]
111008817
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111008817
03036 Chromosome and associated proteins [BR:
mcha03036
]
111008817
Peptidases and inhibitors [BR:
mcha01002
]
Metallo peptidases
Family M1
111008817
Transcription machinery [BR:
mcha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111008817
Coactivators
SAGA/TFTC/STAGA complex
111008817
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111008817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
111008817
NCBI-ProteinID:
XP_022137326
UniProt:
A0A6J1C691
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MAKPRKPKNTDDAKPPDNSGAIVHHQKLCISIDIDKRRIYGFTELEIAVPDIGIVGLHAE
NLGIVSVSVDGDPTEFEYYPRHQHAESERSFKAVSSPSSAADSAGSIYLSSIEKELVPNL
LINCCKAFKNGSEQQDQPFLENGLQPAGEDKQNIRLVRIDYWVEKSEVGIHFSDHMAHTD
NQIRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQVLSKDNPPRKTYVYQVD
IPVNAHWISLAVGPFEILADHQNGLISHMCLPVNSLKLKHTVEFFHSAFSCYKDYLSVDF
PFGSYKQVFVEPEMALSSACLGVSMCIFSSHLLFDEKIIDQTIDTRIKLAYALARQWFGI
YITPEAPNDEWLLDGLAGFLTDLFIKKNLGNNEARYQRYKANCAVCRADDSGLTTLSSSS
TCKDLYGTQRIGIYGKIRSWKSVAILQMLEKQMGPESFRKILQNIVSRAKDTTSTSRSLS
TKEFRHLANKIGNLERPFLKEFIPRWVESCGCPLLRMGFSYNKRKNMVEMAVSRECTVTP
ATSVDNRDSDTGWPGMMSIRIYELDGVFDHPVLPMTGESWQLLEIQCHSKLAARRLQKTK
KGSKPDGSDDNADIPALDIRSSVESPLLWLRADPEMEYLAEIHFHQPVQMWINQLEKDKD
VIAQAQAITTLEMLPQPSFSVVNALNNFLTDPKAFWRVRIEAALAMAKTASEDTDWAGLL
NLIKFFKSQRFDADTGLPKPNEFRDFPEYFVLEAIPHAVAMVRATDQKSPREAVEFVLQL
LKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILFLASLLKRIDRLLQFDRLMPSYNGI
LTISCIRTLTQIALKLSGLLSLDRVFELIRPFRNFNSMWQVRIEATRALLDLEYHCNGID
AALLLFIKYLEEEKSLRGQVKLGVHVMRLCQIMRRSDSNDLVNSDTLVALLLLLEGHMAF
NNVYLRHYLFCILQVLGGRPPTLYGVPREYKTLHMGETGTCSEQKKVLTSLIPEFSPPEP
SSVSAVAPMPSIAATLSSEPLDAPKQRSDSLAIPEVSKGGGAIPEVPKQAMAIVEPPREA
ASVSNSYERKLPVVKIKVRSSAATSRAEADNQTIERSHAAPHETDVGPSSSVSVDAPQRN
IAETTSISNQNLEEVNSCHDQGSRMTASIGSAKLASYGDELGKDFQCTADSSRAFGHFQP
EDPSSSSIIQDNNVDADAQKYASLQTLSLPQHDHGLASLHSRHGKKEKKKDREKKRKRES
HKEHRNDPEYIERKRLKKEKKQKEKEMAKLLNEEVKPLPIAIPPIKEPPIKPTLVQLETN
EPSGSRLIVGTQSKPEASEGTTSAAPKLRIKFKNRMLNNS
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcctcgcaagcccaagaacaccgacgatgccaaaccacctgacaactctgga
gctatagttcatcaccagaagctttgtatttctatcgacattgacaagcgtcgcatctat
gggtttaccgagttggaaatcgcggtgccggatattggtatagttgggttgcacgcggag
aatctcgggattgtgagtgtttcagtggatggcgacccgactgagttcgagtattatccg
cggcatcaacatgcggaaagtgagaggagttttaaagcggtgtcgtcaccgagctctgct
gcagattctgcggggtcaatttatttatcttcaattgagaaagaactggtccctaatttg
ttgataaattgctgcaaggctttcaagaatggaagtgagcagcaagaccagccatttctt
gagaatggactgcaacctgcgggcgaggacaagcagaatataaggctggttcgtattgat
tactgggtagagaaatcagaggtaggtattcacttcagtgatcatatggctcacactgac
aaccaaataaggcgtgcaagatgctggttcccttgtatggatgatggtcttcaacgatgc
aagtatgacctggagtttactgtctctcaaaatcttgtggctgtcagtaatggaattctg
ttgtaccaggtcttgagtaaggacaatcctccccgcaaaacctatgtgtatcaggtggac
atccccgtcaatgcacattggatatcacttgcagtcggaccatttgaaatccttgctgat
caccaaaatggactgatatcacatatgtgcttaccagttaattcattaaagctcaagcat
acggtagaattttttcatagtgcattcagctgctataaggattacctctcggtggacttc
ccatttgggtcatacaaacaagtcttcgtagagcccgagatggcactatcatcagcgtgt
ttgggagtttccatgtgtatatttagttctcatcttttgtttgatgagaaaatcattgat
cagaccatagatacgaggattaaacttgcgtatgctcttgcaagacagtggtttgggatt
tatattacgcctgaagccccaaatgatgagtggttgttggacggtcttgctggatttttg
actgatttattcatcaagaagaacttaggaaataatgaggcacgctaccagagatacaag
gctaattgtgccgtttgcagagcagatgatagtggtttgaccaccttgagctcctcttct
acttgtaaagatttgtatggaacccaacgcattggtatatacggaaaaataagatcatgg
aaatctgtagcaatccttcaaatgttagagaagcagatggggcctgagtctttccgtaag
attctgcaaaatattgtttctcgtgctaaagatacaacctctacttcacgatcactaagc
acaaaggagtttcgtcatttggccaataagattgggaatctcgagcggccatttcttaaa
gagttcattcctcggtgggttgaatcatgtggttgtccattgttaaggatgggattttcc
tacaacaagcgaaaaaatatggttgaaatggcggtgtcacgggaatgcacagttacacca
gccacaagtgtagacaatcgagatagtgatactggatggcctggcatgatgagtatcagg
atttatgaacttgatggtgtgtttgatcatccagttcttccaatgactggagagtcttgg
cagctactagaaatacaatgccattccaaacttgctgctagacgcctacagaaaactaaa
aaggggtcaaaacctgatggttctgacgacaatgctgatatacctgcactcgatattcgc
tctagtgtggaatcccctttgttatggttgagagcagaccctgagatggaataccttgct
gaaattcactttcatcaacctgttcagatgtggattaatcaattagagaaggacaaagat
gtcattgcccaagcgcaagcaatcacgacgttggagatgctgcctcaaccatctttttct
gttgttaatgctcttaataatttcctcacagaccccaaggccttctggagagtgagaatc
gaagcagcattggcaatggccaaaacggcatcagaggatactgattgggctggtttgctt
aatttgattaagttttttaaaagtcagaggtttgatgcagataccggactccccaagcca
aatgaatttcgtgattttcctgagtattttgttcttgaggcaattcctcatgctgttgct
atggtcagggccaccgaccaaaaaagccctagagaagctgttgagtttgttttgcaactt
ttgaagtataatgacaacaatgggaatccttactctgatgttttctggttggctgcatta
gtccagtcagttggcgagcttgaatttggacaacagagcattctatttttagcatcactt
ctgaaacggattgataggctcttgcagtttgacaggctgatgcctagctataatgggatc
ttgactattagctgcatcagaaccttgactcagattgcactgaaactatctggacttctc
tctcttgatcgtgtatttgaacttataagaccttttcgaaattttaattccatgtggcaa
gttcgaattgaggcaacacgagcgcttcttgatcttgagtaccactgcaacgggattgat
gctgcattgttattgtttattaaatatttagaagaagagaaatccttgcgagggcaagtg
aagctgggtgtccatgttatgcgtttatgtcagataatgagaagatctgactcgaatgat
ttagtcaatagtgacactcttgttgctttgctcctcctacttgaaggccatatggcattt
aacaatgtctatcttcgtcactacttgttctgtattttacaagtccttggaggaaggccc
ccaacactttatggagttcctagagaatataaaacattgcatatgggtgagacgggaact
tgtagtgaacaaaagaaggttttaacttctctcattcctgaattcagtccaccagagcca
tcatcagtctctgccgtagcacctatgccatcaattgcagctactctgtcatcagaacca
cttgatgctcccaaacagaggtctgacagcttagcaattcctgaggtttccaaaggagga
ggagcaattccagaagttcccaagcaagctatggcaatagtagaacctcccagagaagca
gcctctgtttccaacagctatgagaggaagttgccagttgttaagatcaaagtcagatca
tctgctgccacaagtagagcagaggctgataatcaaaccattgaaagatctcatgctgca
cctcatgaaacagatgttggtcccagtagttctgtttctgttgatgcaccccaaagaaat
attgccgagactacaagtatcagcaaccagaatcttgaggaggttaactcctgtcatgat
caggggtctcgcatgacagccagcattggcagtgcaaaacttgcaagttatggtgatgaa
cttgggaaagacttccagtgcactgccgattccagtagggcttttggacattttcagcca
gaagatccttcatcatcaagcatcatacaggataacaatgttgatgctgatgcacagaaa
tatgctagtcttcagactctatctttaccacagcatgatcatggtttggcctctttgcac
tctcgccatgggaaaaaggagaagaagaaagacagagaaaagaagcggaagcgggaaagt
cacaaagaacatcgcaacgatcctgaatacattgagcgcaaacgtctgaagaaagagaag
aagcaaaaagaaaaagagatggcaaagctattgaatgaagaggtgaagccactgccaata
gcaatccctcctataaaagaaccaccaatcaagccaacactcgtgcagctggaaacaaac
gaacccagtggatcaagattaatcgtaggaactcagagtaagcccgaggcatcagaaggt
actacttctgctgctcccaaacttagaatcaaattcaaaaatcggatgctgaacaattca
taa
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