KEGG   Momordica charantia (bitter melon): 111008850
Entry
111008850         CDS       T05045                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03030  DNA replication
mcha03410  Base excision repair
mcha03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111008850
   03410 Base excision repair
    111008850
   03420 Nucleotide excision repair
    111008850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcha03032]
    111008850
   03400 DNA repair and recombination proteins [BR:mcha03400]
    111008850
Enzymes [BR:mcha01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     111008850
DNA replication proteins [BR:mcha03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    111008850
DNA repair and recombination proteins [BR:mcha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      111008850
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf_DPOE_2 zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 111008850
NCBI-ProteinID: XP_022137384
UniProt: A0A6J1C732
LinkDB
Position
Unknown
AA seq 2194 aa
MVGGNFKARQPLRTLKTCNITNSESRRRNLTDNHKSKKQRIVESATAEEEIESKFGFGLF
SEGDKRLGWLLTFAPSSRKDQDTGKVYSCIDLYFVTQDGSSFKSKYNFRPYFYAATKDKM
ETDVEAYLKRRYEGRIADIEILEKEDLDLKNHLSGLHKAYLKLSFDTVQELMNVKNELFH
VVESNWEKSDAAEAYDSILFGKREQKPQDFLECIVDLREYDVPYHVRFAIDHDLRCGQWY
DVSVSSTGVTLEKRKDLLQRAEVRICAFDIETTKLPLKFPDAEYDMIMMISYMVDGQGYL
IINRECVGEDIENLEYTPKPEYEGFFEVTNVKNELELLKLWFSHMREVKPGIYVTYNGDY
FDWPFLESRAAFHGLKMSNEVGSQCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSHGLK
AVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVSTYYLYITYVHPFIFSLATII
PMTPDEVLRKGSGTLCEMLLMVQAYKADVVCPNKHQSDPEKFYNNRLLESETYIGGHVEC
LESGVFRSDIPTSFRLDSSAYDQLIDNLDRDLQYAIQVEGKMDXEMVSNYSNVKNAIMEK
LIRLRDGPVREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNHPEKTCLRK
LEWVWRGEVFMAKKSDYYHLKRQIESEFVDSGDIRLSKSFLELQKLEQQAKLKDRLKKYC
QKAYKRVLDKPVTEVREAGICMRENSFYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKESG
NSIKIQEAQDMLVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNA
RLLIEKIGKPLELDTDGIWCALPGSFPENFTFKTKDSKKLTISYPCVMLNVDVARNNTND
QYQTLIDPVKKIYKTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAEL
KGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSVVASVANRWLDLLDSQGKDIADSE
LLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDTMVRDKGLRCQYIVACEPKGTP
VSERAVPVAIFETDAEIMKFYVRKWCKISSEAGIRSIIDWSYYKQRLSSAIQKIITIPAA
MQKVANPVPRVVHPDWLHKKVREKDDKFRQQKIVDMFASSNGAKFSKNSGFSCSKHVMNE
ENSEDLEDFQKKTSSINGPKPVVRYYDVRPMKHSVRRNSQIDSSMQEKINAGGRGPSSPL
YFENIDRNVDYRGWLEMKKRKWKDNLDKRKKQRLGTPLPANDVTRELNCATNNKEAPRIA
GVDSYFKRHEISITHCHWQIIQLVHSSQNGQFFVWAVVEGVMLRIPITVPRVFYLNSKVP
VTEEVGRGVNKILPHGRHTYNLYEVVTDEGQFKTQSNKLAALLADPEVEGIYESKVPLEF
KSILQIGCVCKVDKAAKRRNIQDGWNLNELQMKTTTECSYLEKPIIFFYVYHSISEGGAI
YITYFPGIGSILVVVVSPYRNKDLSSTFLERQFXEACQMLSGQSQSPNSGINYKVDYVAN
NKEAEVILQRSITEHRSINRGPIVAVIDCPNLQLLKSGVRALDDFPCVRVPYNARHSQYQ
FLGWQQKAAKIGMQRCAASSQWLNDRISLARYAHVPVGNFEHDWKIFTADIFFSRALHDQ
QQVLWASDDGVPDIGGINIEDVCFVDEVQQPFLKCSGAYRKISVELKIHHLAVNALLKSS
QVNEMEGGFDEAPSAFHVLKQLIQRCLADAVTSGNVYADEILQHLYRWISSPQSKLHDPA
LHRLLHKVMRKVFALLLAELRKLGATIIFGNFSRIIIDTGRFNLSAAKAYCDSLLRTLQT
RDLFEWIELKPVQFWHSLLFMNQYNYGGIGAREDETTDVESQVDVVSNWNIAEYLPKKIQ
DSFVSIVSQFVYIPWKYATEQAAAGTSLQRDDTCTPSVTVVATESFELSVTEYLKEQLSS
YFSHQLFGIVRDLLKQPSGSVHKGDAALEFINYVCAAXALDQNVQNDVRVMKKNLLKYVH
VREFAPETEFSDPCPSFILPNVFCSYCNECRDLDLCRDSALGAQEWRCGXAECGQPYNQQ
VIENTLIQIVQQRERAYHVQDLVCLRCKQVKAAHLWEQCSCAGSFKCKDDNQEFFSDMRI
LFDIATRQGFQLLQEFTLWILHNGLLLESSSGGA
NT seq 6585 nt   +upstreamnt  +downstreamnt
atggttggtggcaatttcaaagcgcgtcaaccacttcgcaccttgaagacatgtaatata
acgaatagcgaaagccgacggcgaaacctcaccgacaaccataagtctaagaagcagagg
atagtcgagtctgctaccgccgaggaggagattgaatcgaagtttggattcggtctcttc
tctgaaggtgataagaggcttggatggttgctcacttttgctccttcctctcggaaggat
caggatactggaaaggtctatagctgtatcgatctttattttgtaactcaggatggcagc
agtttcaaatcaaaatacaactttcgtccttatttctatgcagccacaaaggataaaatg
gaaactgatgtggaggcttatttgaaacggcgttatgaaggtcgaatagctgatattgag
attttagaaaaagaagaccttgatcttaagaaccatctgtcgggcttgcataaggcatat
ttaaagctatcatttgacactgttcaagaattgatgaatgtaaaaaatgaactattccat
gttgttgaaagcaactgggagaaatctgatgctgcagaagcatatgattctattttattt
gggaaaagagaacaaaagcctcaagattttctagaatgtattgttgatcttcgagagtat
gatgttccttaccacgttcgctttgctattgatcatgatttgcgctgcggacagtggtat
gatgttagtgtatcaagcactggtgttactcttgagaagaggaaagatcttctgcaacgt
gctgaagttcgcatatgtgcatttgatattgagaccacaaagctaccattgaaatttcca
gatgctgaatatgacatgataatgatgatttcctatatggttgatggacaagggtacttg
attatcaacagagagtgtgttggagaagatatcgagaatttggagtacactccaaaacct
gaatatgaagggttcttcgaggtgaccaatgtgaaaaatgagttggagcttctcaaattg
tggttttcccatatgcgagaggtgaaacctggtatctatgtcacctataatggcgactat
tttgactggccattccttgaaagcagagcggcatttcatgggttaaaaatgagtaatgaa
gtaggatctcaatgcgacaagaatcagggggaatgtcgttcaaaatttgcttgtcatttg
gattgctttgcctgggtgaagcgtgatagttatcttcctcagggtagtcatggtttgaag
gctgtcacaaaagcaaaattgggttatgatcctcttgaagtgaatcctgaggatatggtg
cggtttgcaaaggaaaagcctcagatgatggcttcctattccgtttcagatgctgtttct
acatactacttgtacataacctatgttcatccttttattttttctcttgcaaccatcatt
ccaatgaccccagacgaggtattgcgcaagggaagtgggacactttgtgaaatgctttta
atggttcaggcttacaaggctgatgttgtgtgtcccaacaaacatcaatcagatccagag
aagttctacaacaaccggcttcttgaaagtgagacatacataggtggtcatgtagaatgt
cttgagagtggtgtatttagatctgacattcctaccagttttaggcttgattcatctgct
tatgatcaattgatagacaatctagatcgggatctacagtatgccatacaagtagaagga
aagatggacrtggaaatggtgtcaaactatagcaatgtgaagaatgctatcatggaaaag
cttattagattgcgggatggacctgtacgtgaagagtgccctttgatatatcaccttgat
gtagctgcaatgtatcctaacattattttaacaaataggcttcagccgccgtcaatagtt
acagatgaggtttgtactgcctgtgatttcaaccatcccgaaaaaacttgtctacgaaaa
cttgaatgggtttggcgtggagaggtattcatggctaaaaagagtgactattatcatttg
aagaggcaaattgagtctgagtttgttgatagcggtgacattcggttgtcaaaatcattt
cttgaacttcagaagttggagcagcaggcaaagctcaaagatcgtttgaagaaatactgt
cagaaggcttataaacgggtacttgacaagccagtcactgaagttcgagaagcagggatc
tgcatgagagaaaactccttctatattgacactgtccgtagttttcgagatagaaggtat
gagtacaaagggctcaataaagtatggaaggggaaactatcagaagctaaagagagtgga
aattcaatcaagatacaggaagcccaagacatgctggttctttatgattctttacaactt
gctcataaatgtatcctcaactccttttatggatatgtgatgcggaagggtgctcgatgg
tactcaatggaaatggctggggttgttacatatactggagcaaaaatcattcagaatgct
cgtctactgatcgagaaaattggaaaaccactggagttagacactgatggtatctggtgt
gcactacctggatcattccctgagaactttaccttcaaaacaaaagactcaaagaagttg
acaatttcatatccatgtgttatgcttaatgtcgatgtggcaaggaacaacacaaatgat
caataccagactcttatagatcctgtgaagaaaatatataaaacgcatagtgaatgctca
attgaatttgaagtggatggaccgtacaaggcaatgatccttcctgcctccaaggaagaa
ggcattctgatcaagaagcgatatgctgtctttaacgatgatggaacccttgcagagctg
aaaggctttgagatcaagcgtaggggggagttgaagctcatcaaagttttccaggccgaa
ctttttgacaaatttcttcatggttctaccttagaggaatgctattcagttgttgcatct
gttgcaaatcgctggcttgatcttctagatagtcaaggaaaagatattgcagatagtgag
ttgcttgattatatatctgaatccagtaccatgagcaagtctctggcagactatggggag
caaaagtcttgtgctgttaccactgcaagacgccttgctgattttcttggtgacacaatg
gtcagggataaaggcctacgttgtcaatatatagttgcatgtgaacccaagggaacacct
gtaagtgagcgtgctgttcctgttgctatatttgagactgatgcagagatcatgaaattt
tatgtacgcaaatggtgcaaaatttcatcagaagctggaattcgatccatcattgactgg
tcctactacaagcaacgcctaagctcagccattcaaaaaattataacaattccagctgcc
atgcaaaaggttgcaaatcctgtccctagggtggttcatcctgattggttacataagaaa
gttcgtgagaaggatgataaatttcgccaacagaaaatagttgatatgtttgcctcctca
aatggagctaaattttcaaagaacagtggttttagctgcagcaaacatgtgatgaacgaa
gagaattctgaagatttagaagactttcaaaagaaaacgagttctataaatggccccaaa
ccagttgtccgatattatgatgttagacccatgaaacattcagttagaagaaatagccaa
atagattcctcgatgcaggaaaaaattaatgctggaggacgtgggccttcttcaccattg
tattttgaaaacattgacagaaatgtggattaccgaggatggcttgaaatgaagaagcgg
aagtggaaggataatttggacaagaggaagaaacaaagattggggactccacttcctgct
aatgatgttacaagggagttaaattgtgctacgaataataaagaggctcctagaattgca
ggtgttgattcatatttcaagaggcatgaaatatctatmacacactgccattggcagatt
atacagcttgttcatagttcacagaatggccaattttttgtttgggctgtcgttgaagga
gttatgctaaggattcctattacagttccaagagttttttaccttaattcyaaagtaccc
gtcacagaagaagtgggtaggggtgttaacaaaatccttccccatggaaggcacacctat
aacctctatgaggttgtgactgatgaaggtcaatttaagacacagagcaataaacttgca
gccctccttgcagatccagaagttgagggaatctatgagagcaaggtaccattggagttc
aagtctatcctccagattggttgtgtctgtaaagttgataaagctgctaaaagacgaaac
attcaagatgggtggaatctgaatgaactgcaaatgaagactacaacagaatgcagttat
ctggaaaaaccaataattttcttttatgtgtatcatagcatttctgaaggaggagctatc
tacattacttattttcctggcataggatccatacttgtggtggtggttagcccttaccga
aacaaagacttgtcttccacttttcttgaaaggcaatttcrtgaagcttgtcaaatgctc
tctggtcaatcacaatctccaaatagtggtataaattacaaggttgactatgttgctaac
aacaaagaagctgaagtgattttgcagagatcaataacagagcacaggagcataaatcgt
ggacctattgtagctgtaattgattgcccaaatctgcagctgctgaagtcaggtgtgaga
gcgttagacgattttccatgtgtgagggtcccttataatgctcgtcatagtcaatatcag
tttcttggttggcaacaaaaagctgcaaagattggaatgcaacggtgtgctgcatcatcc
cagtggttgaatgatagaatctctcttgccagatatgcgcatgtacctgtaggaaacttt
gaacatgattggaaaatttttacagcagatattttcttttcaagagcattacatgatcaa
cagcaggtactttgggcatcagatgatggtgttccagatataggaggcattaatattgaa
gatgtgtgtttcgtggatgaggtccaacaaccttttctgaaatgttctggagcatataga
aaaatttctgtggagcttaagatccatcatttggctgttaatgctctgctgaagagcagc
caagtgaatgaaatggaaggtgggtttgatgaggctccatcggcatttcatgtcctgaaa
caattgatacaaaggtgtcttgcagatgcagttacatctggaaacgtatatgctgatgaa
attttgcagcatctttaccgttggatttcgagcccccaatcaaaacttcatgacccagct
cttcatcgcttgcttcacaaggttatgcggaaggtgtttgctcttttgttggctgaacta
cgcaaattaggtgccaccattatttttgggaacttctcgagaataattatagacacggga
aggtttaatctctctgctgctaaagcatactgtgatagcttgctgagaacactacaaaca
agggacctgttcgagtggattgaactgaaaccagtacagttctggcactcgctgttgttt
atgaatcagtacaattatggtggaattggagcaagggaggatgaaaccacagatgttgaa
tctcaagttgacgtagtatccaactggaacattgctgaatatctaccgaagaagattcag
gactcctttgtttctatcgtttctcaatttgtatatattccatggaaatatgcaaccgag
caagctgcagcaggcacatccttgcagcgggatgacacgtgtaccccatccgttactgtt
gtagccactgaatcgtttgaattaagcgtgacagaatatctcaaagagcagctaagttct
tacttcagccaccaactgtttggtattgttcgtgatttactaaaacaaccttctggtagt
gttcataaaggagatgctgcattggagttcattaattacgtctgcgctgctttkgctcta
gaccaaaatgtccagaatgatgttcgggtaatgaagaagaatttactgaagtatgtgcac
gtaagagagtttgcaccagagactgagttttccgatccctgcccgtccttcatcttaccc
aatgtcttttgcagctactgtaacgagtgtcgagatttggacttgtgccgcgactcagcc
ttaggagcacaagaatggcgctgtggtktggcagagtgtgggcaaccatacaaccaacaa
gtgatagagaacactttgattcaaattgtgcagcagcgagagcgtgcgtatcacgtgcag
gatttggtatgccttcgatgcaagcaggttaaagcggctcacttgtgggagcagtgtagc
tgtgctggctcgtttaaatgcaaagatgacaatcaagaatttttcagcgacatgcggatt
ctcttcgacatagccactcgtcaaggctttcaattgctccaagagttcactttatggatc
ttgcataatgggctcctattggaatcctcatccggcggagcatag

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