Momordica charantia (bitter melon): 111008983
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Entry
111008983 CDS
T05045
Name
(RefSeq) LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111008983
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111008983
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
111008983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
Helicase_C
ResIII
AAA_22
AAA_19
DEXQc_Suv3
T2SSE
Motif
Other DBs
NCBI-GeneID:
111008983
NCBI-ProteinID:
XP_022137565
UniProt:
A0A6J1C702
LinkDB
All DBs
Position
Unknown
AA seq
2086 aa
AA seq
DB search
MLFQIPRLTSSLREPFDVDQAYLLRKLILQNHKPIHSVTSSGESELARRIVYQWDKASIE
VRQAYKQFIAAVVGLVDREVPSEELGEVALTIYRLFGEQKEENDIDCTAKNKQELQKLIG
NTVSDARLQKVVPLVQKLCLLQPRDHATALLAEKQVNKDYADVEFGADLVFREPARFLVD
LSLENSDLLGEDTITPTFYDRQHVHDDSINFDLSNERGKLNLSWLRDACDDIIRKSTSQL
SLDELAMAICRVLDSEKPGEEIAADLLDLVGDGAFEFVQDLISHRRELVDDIHHGVTIIK
SEKTNSSSQSRMPSYGTQVTVQTESERQIDKLRRKEEKRNKRGIEYGTESDLSAINFSSL
VQASQRKNPFDDLIGSGEGANSLTVSALPQGTQRKHFKGYEEVIIPPTPAAQMKPGEKLI
EIKELDDFAQAAFRGFKFLNRIQSRIYDTVYNTNENILVCAPTGAGKTNIAMISILHEIS
QHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDMQLSKNELEET
QMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQ
TMIRIVGLSATLPNYLEVAQFLRVNPGTGLFFFDSSYRPVPLAQQYIGISEHNFAARNEL
LNEICYKKVVDSLKHGHQAMVFVHSRKDTAKTAEKLVELGRKYDDLELFTNDAHPQFGII
KKEVIKSRNKDLVELFNFGIGVHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLP
AHTVVVKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAHYLRL
LTSQLPIESQFIGSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIGWDE
VMADPSLSSKQRALITDAARALDKSKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYN
EMLRRHMNDSEIIDMVAHSSEFENIVVRDEEQSELEMSVRTSCPLEVKGGPSNKHGKISI
LIQLYISRGSIDTFSLVSDAAYISASLARIIRALFEICLRRGWCEMTLFMLEYCKAVDRR
IWPHQHPLRQFDKDLSSDILRKLEERDADLDRLQEMQEKDIGALIRYAPGGRLVKQYLGY
FPLIQLSATVSPITRTVIKVDVLITAEFTWKDRFHGGSQRWWILVEXXXXDHIYHSELFT
LTKKMAREPQRLSFTVPIFEPHPPQYYIHAVSDSWLHAEAFYTISFQNLALPEASTSHTE
LLDLKPLPVTALGNRNYEALYKFSHFNPIQTQIFYVLYHTDDNILLGAPTGSGKTISAEL
AMLHLFNTQPDMKVVYIAPLKAIVRERMNDWRNGLVSRLGKKMVTSLERHVSSTLSFFYP
LLSIPCLYLFACWRYIINKRHLXXVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTDR
KVRFVGLSTALANASDLGDWLGVGENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMN
KPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFINMAEEELQMILCQ
VIDQNLRHTLQFGIGLHHAGLNDGDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVII
KGTEYYDGKSKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFP
VESSLKEQLHDHINAEIVSGTICHKQDAVHYLSWTYLFRRLMVNPAYYGLDSMEPEILSS
YLSRLVQSTFEDLEDSGCIKMEEDKVEPMMLGSIASQYYLSFMTLSMFGSNIGPDTSLEV
FLHILSAASEYDELPVRHNEENYNAALSERVRYKVDKDRLDDPHVKTNLLLQAHFSQLEL
PISDYITDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMRLLQMVMQGLWCDVDSALWM
LPCMNEDLASSLRKLGYLTLHQLLDLPKTTLQNLIGNVAASKLTQDLQYFPRVQMKIKLQ
RRDDDVENTSLHIRLEKISSRKNRSRAFAPRFPKIKDEAWWLVLGNTSTSELYALKRVSF
SDRLVTSMQLPPTRTGFQEMKLILVSDCYIGYEQEYSIEEQIKGSS
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcagattccccgattgaccagctctctcagagagccattcgatgtcgaccag
gcgtatctccttcgcaagctcattcttcaaaatcacaaaccgatccattctgtaacttca
tctggcgagtcagagcttgcacggaggatagtgtatcaatgggacaaagcatccattgaa
gttcgacaagcttataagcaattcattgccgcggtagtagggttggttgacagagaagtg
ccatctgaagagcttggcgaggtagcactgactatttatcgtctttttggcgagcaaaaa
gaagagaatgatatcgactgtactgctaaaaacaagcaagaattgcaaaagcttattggt
aatacagtttcagatgctcggctgcagaaagttgttcctctagttcagaaactatgtctt
ttgcagccaagggatcatgcaactgcactgcttgcagagaagcaagttaacaaggattac
gccgatgtagagtttggcgctgatcttgtttttagagaacctgctaggtttttggtggat
ttgtctctggaaaattcagatttgctgggcgaggatactattacacctacattttatgac
agacaacatgtgcatgatgattccataaactttgatctctctaatgaaagaggaaagtta
aatttgagttggctgagggatgcatgtgatgatataatcagaaaaagtacctcacaactt
tcccttgatgaacttgcaatggccatttgtcgagttcttgattcagaaaaacctggagag
gagatagctgcggatctactggatcttgtcggtgatggtgcatttgagtttgttcaagat
ctaatttcacaccgaagggaacttgttgatgatattcatcatggagtaacaataataaaa
tctgagaaaacgaattcaagctctcaatcacgaatgcctagctatggaacccaggttact
gttcaaacagaatcagagagacaaattgataagcttcgacgtaaggaggaaaagcgaaac
aaacgtggaattgaatatggcactgaaagtgatttgtctgctattaacttttcttcttta
gttcaagcaagtcagaggaaaaatccttttgatgatcttattggatctggtgagggtgct
aactcccttacagtcagtgcccttcctcaaggaacacagaggaagcattttaaggggtac
gaggaggtaattatccccccaacgccagcagcacaaatgaaacctggagaaaagctgatt
gaaataaaggagttagatgactttgctcaagctgcttttcgtgggttcaaattcttgaat
cgtatacagagccgcatttatgacactgtttataacaccaatgaaaatatactggtctgt
gctccaacaggtgctgggaaaactaatatagctatgatctccattctccacgagatttca
cagcatttcaaggatggatacttgcataaagatgaatttaagatagtttatgttgctcct
atgaaggcgttagctgcagaggttacatcaacttttagccatcgcttatctcccttgaat
gttactgtcagagaactaactggagacatgcaactttctaagaatgaactagaagaaact
cagatgatagtgacaacacctgagaaatgggatgttattactcgcaaaagcagtgatatg
tcactctctatgttagtcaaactcttaattattgatgaggtgcatcttttaaatgatgat
cgagggcctgtaattgaggcattagtcgcacgaactcttcgtcaggtggagtcaacacag
acaatgatacgtattgttggcctttcagccactctgcctaattacttagaggttgcacaa
tttcttagagtgaatccaggaacaggacttttcttctttgattctagctatcgccctgtg
cctcttgcacaacaatatattggtatcagcgagcacaactttgcggctcgcaatgaattg
ttaaatgaaatatgctacaagaaggttgttgattcattaaagcatgggcatcaggcaatg
gtgtttgttcattctcgaaaggacacagcaaaaacagcagagaaactggtcgaactaggt
cgaaagtatgatgatcttgagctatttacgaatgatgcacacccacaatttggtattatc
aagaaagaagtcatcaaatccaggaataaagatttagtagaactttttaattttgggatt
ggtgtacatcatgctggaatgctacgtgctgatagaggtttaactgaaaggcttttctct
gatggacttttgaaggttcttgtttgtacagctaccttagcatggggtgtaaatctgcct
gctcatactgttgtcgtaaagggcacccaattgtatgatccaaaagctggtggatggcga
gatttgggtatgcttgatgtcatgcagatttttggacgagctgggagacctcagtttgac
aaaagtggtgaaggcatcataattacatctcacgataaacttgcccattatttgcggttg
ctcacaagtcagcttcctatagagagtcagtttattggctccttgaaagataatttaaat
gcggaggtcgcactgggtactgtaactaacgtgaaggaagcttgtgcctggcttggatat
acttatttatttataaggatgagactaaatcctctggcatatggtattggatgggatgag
gtcatggctgatccttctttgagttcaaagcaaagagctctcataacagatgcagcacgt
gcgctcgacaaatccaagatgatgcgttttgatgaaaaaagtggcaacttttattgtaca
gagctgggccgcattgctagccacttctatattcagtactccagtgttgaaacgtacaat
gagatgttgagacgccatatgaatgacagtgagataattgatatggttgctcactcttct
gagttcgaaaatattgttgttcgagatgaggagcagagtgagctggagatgtcagtacga
acatcctgtccgttagaagttaagggtggcccatcaaataaacatggaaaaatttccatc
ctcattcagttgtacatatccagaggttccattgataccttttcattagtctctgatgct
gcttacataagtgctagcttggcacgtattattcgagctctcttcgaaatatgtttgaga
aggggctggtgtgaaatgactttgttcatgttggaatattgcaaagccgttgatcgtcga
atatggccacaccaacatcctcttagacaatttgacaaggatctttcctcagacatattg
cgaaagcttgaggagcgtgatgctgacttggatcgtctgcaggagatgcaggaaaaagac
ataggagctttgattcgttatgcacctggtggaagattggttaagcagtatttgggatac
tttccactaatccagttatcagcaactgttagtccaataacaagaacagtcataaaggtt
gacgtgctcataacggctgaattcacatggaaagatcgttttcatggtggttcacaacgc
tggtggattctagttgagnnnnnnnnnnatgaccatatttatcactccgagcttttcact
ctgacaaagaagatggcgagagaacctcaaaggctttccttcacagtgccaatatttgaa
ccacatccacctcaatattatattcatgctgtttctgactcctggctgcatgctgaagca
ttttacaccatatctttccaaaatttagcgctaccagaggctagtacgtcacacactgag
ctcctagacttaaaacctcttccagtaactgcacttggtaacagaaattacgaagctctg
tataaattttcacattttaatccaattcagacacagattttttatgtgttgtatcatacg
gatgataatattctgttgggtgctcccactgggagtggaaaaaccatatctgctgaacta
gctatgcttcacctcttcaatactcagcctgatatgaaggttgtctatatagcacctttg
aaggccattgttcgtgaaagaatgaatgactggagaaatggtcttgtttctcggcttggc
aaaaaaatggttacatctttagaacgtcatgtttcttctaccctcagtttcttttaccca
ttactttcaattccgtgtttgtatctttttgcatgttggaggtacattattaacaaacga
catttataataggttggattaatgattctagatgagatccacttattgggagcagatcga
ggtcccattctcgaggttatagtttcaagaatgaggtatatttcatcacagaccgatcga
aaagttagattcgtaggcctttcaactgctttagcaaatgcaagtgatttgggcgactgg
ttaggtgtgggagaaaatggacttttcaatttcaaaccaagtgtaaggccagttcctctt
gaagtacatatccagggatatcctggaaagttttactgccctaggatgaacagcatgaat
aaaccaacatatgctgccatttgcacccattcaccgaccaagccagttcttatatttgtc
tcatcccgtcgtcagacaagactcacagcattagatctcattcagtttgcagcttcagat
gagcatccaaggcaatttattaatatggctgaagaagagcttcagatgattctttgtcaa
gttatagatcagaatcttagacacaccttgcaatttggtattgggctacaccatgcaggt
ttaaatgatggggataggtctttggttgaggaactgtttgctaacaacaaaattcaggta
ttggtttgtactagcacattagcttggggtgtgaaccttcctgcacatctagttattatt
aagggaacagaatactatgatggaaaatcaaagagatatgttgattttccaatcacggat
attctgcaaatgatgggtcgtgccggtcgacctcagtatgatcaacatggaaaagcagtc
attcttgttcatgaacccaaaaagagtttctataagaagtttttgtacgagccctttcca
gttgagagcagtctgaaggagcagttgcatgaccacatcaatgctgagatagtttcaggc
accatttgtcacaaacaggatgcagtgcactatcttagctggacatatttgttccgtagg
ctgatggtaaatcctgcttactatgggttggatagcatggaacccgaaattctaagttct
tacttgtctaggttagtacaaagcacatttgaggatctcgaggatagtggatgcataaag
atggaagaagacaaagtggagccaatgatgctgggctcaatagcatctcagtattatctt
agcttcatgactttatccatgtttggctcaaatataggtccagatacgtcacttgaagta
tttctgcatattctttctgctgcttctgaatatgatgaacttcctgtgcggcataatgag
gaaaattacaatgctgctttatccgaaagagttcgatataaggtggacaaagatcgactt
gatgatccacatgtgaaaacaaatttacttcttcaggcacatttttctcagttggaatta
cctatcagtgactacatcacagacttaaagtcagtgttggatcaaagtatacgcattatt
caggccatgattgatatatgtgctaacagtgggtggctatcaagctcaattacttgcatg
cgtctattgcaaatggtcatgcagggattgtggtgtgatgtggattcggcattgtggatg
ctcccatgcatgaatgaggatcttgcaagttcacttagaaaattgggatatctcactctg
catcagttgttggatctccccaagacaactttgcaaaatttgattggaaatgttgctgct
tcaaaattaactcaggatttgcagtattttccacgtgtccaaatgaagataaaacttcaa
agaagggacgatgacgttgaaaacacttctcttcacattagattggagaagataagttcg
aggaaaaatagatccagggcatttgctccacggtttccgaagataaaagatgaagcatgg
tggctagttcttggtaatacctccacttcggaactgtatgctttaaagagagtttctttc
tctgatcgcttggtcacaagcatgcagctacctccaacaagaactggtttccaggaaatg
aaattgattttggtctcagattgttatattggttatgagcaagaatactccattgaagaa
cagataaaaggaagcagttag
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integrated database retrieval system
