Momordica charantia (bitter melon): 111009138
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Entry
111009138 CDS
T05045
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111009138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111009138
Spliceosome [BR:
mcha03041
]
Common components
Common spliceosomal components
SR proteins
111009138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Transformer
Motif
Other DBs
NCBI-GeneID:
111009138
NCBI-ProteinID:
XP_022137780
UniProt:
A0A6J1C7M8
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MSSRFSRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAED
AIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGGGGGGGGGGGGGGGGGRFGVS
KRSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDNEGTFGIVDYTNYDDMKYAIR
KLDDTEFKNPWARAYIRVKKYDGSPTRSRSRSRSRSRSRSRSQSRSRSARRNRSKSVERS
VSRSVSRSRSPSPVKSSRPRSKSRSGSPREGREGSE
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgtttttctcgcacaatatatgttggaaacttgccctcagacattaaagaa
tatgaaatcgaagatttgttctacaagtatggtcggattctggatattgaattgaagatt
ccaccccgtcctccatgttattgttttgtggagtttgagagtgttagggacgccgaggat
gcaatccgagctcgtgatggatataattttgatggttgccggttaagggttgagcttgca
catggtggtagaggtccgtcatcaagtgatcgtcgtagtagctatggcggtggcggcggc
ggtggcggtggaggaggaggaggaggaggaggaggaggaggaggacgttttggtgtctca
aaacgatcagaatatcgagttattgtacgcggactcccatcttctgcttcttggcaggat
ttgaaggatcatatgcgcaaggctggtgatgtgtgttttgctgaagtttctcgtgacaat
gaagggacgtttgggattgttgattatactaactatgatgacatgaaatatgctattcga
aaacttgatgatactgaattcaaaaatccttgggcaagagcatacattcgggtgaagaag
tatgatggaagtcccactaggagccggagcaggagcaggagcaggagcaggagcagaagt
cgtagtcaaagccgaagccgaagtgctagacgaaataggagcaaatcagtagagcgatct
gtttctagatcagtttcaaggtcaagatctccatcccccgttaaatcttctagaccacgt
tcaaaatcaaggtctggatcaccacgtgaggggcgggaaggtagcgaatga
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