Momordica charantia (bitter melon): 111009150
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Entry
111009150 CDS
T05045
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111009150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111009150
03036 Chromosome and associated proteins [BR:
mcha03036
]
111009150
Transcription machinery [BR:
mcha03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111009150
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111009150
PBAF complex
111009150
GBAF(ncBAF) complex
111009150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
SWIRM
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
111009150
NCBI-ProteinID:
XP_022137807
UniProt:
A0A6J1C9A8
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MVSILSSSIFCNHVFSLHALLLTFAFYSSLDFACSFLAQDGSPGTEFTSARETPSKKITF
TDVRKTLVADVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDRDSKSNASVSLSGEAGGS
SADSSASKEASRRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEI
NEDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFIGYPD
SGNIDNKYTAVKDHVSADLVLENAGTSLPSKRICLSPLADASNPIMAQAAFLSSLVGVEV
AEAAAHAAVIELSDTGFGGDGESVPAVARDTGEQGNEVASSGGSSGTSTLRGSSVDANSQ
IKEEEVEVERAISHILDVEMKEIVDKIVGFEELDLQMEKELGQLDQMKSMLFVDQLNLLF
NRGCIPGTTVQDKDGKNVRTC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtattctttcttcctccatattctgcaaccatgtattttcgttgcacgccctg
cttcttacttttgcattttactcttcgcttgattttgcgtgctcatttctcgcccaggat
ggttctcctggaacggaattcacgagtgcgagagaaaccccttccaagaagatcaccttt
actgatgtccgaaagacgctcgttgcggatgtaggatccattcgtagggttttcgatttc
ctcgaggcttggggtcttattaattactcgccgtccgcgctgaacaaaccgctcaagtgg
gaggaccgggactcaaagtccaatgcgtccgtctcgctcagcggtgaagctggaggtagt
tccgcagattcctcggcttcaaaagaggcttctaggagagtatgcagcggttgcaagtct
atttgttccattgcttgctttgcttgcgacaagtttgatttaacgctttgtgcaaggtgc
tatgttcgtggtaactatcgagttggtgttagttcttcagattttcgacgggttgagatc
aatgaagacacacgaactgattggactgataaggagactttgcatcttcttgaagctttg
atgcattatggtgatgactggaaaaaggttgcacagcatgttggtggcagaactgagagg
gaatgtgtcgcccattttgtgaagcttcctctgggggagcaatttattggttatccagat
tctggaaatattgacaacaagtatactgcagtaaaggatcatgttagtgctgatcttgta
ttggagaatgctggtacgtctcttcctagtaaaagaatctgtctctcacctctggcagat
gcaagtaatcccataatggctcaggctgcctttttgtcgtctttggtgggtgttgaggtt
gcagaagcagctgcccatgcagctgtgattgaactttctgatacgggttttggaggagat
ggggaaagtgtcccggctgttgctagggatacaggggagcaaggaaacgaggttgcatcc
agtggaggcagcagtggtacgagcacattaagggggtcttctgtggatgccaattcacag
attaaggaagaagaggtggaggtggagagagcaatatctcatattttagacgtcgagatg
aaagagattgtagataagattgttggtttcgaggagctagacttgcagatggagaaggaa
cttgggcaattagatcaaatgaaaagcatgctttttgttgatcaactcaatctcttattc
aatagaggttgtatccctggaaccaccgtccaagacaaggatggcaagaatgttagaacg
tgttga
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integrated database retrieval system