KEGG   Momordica charantia (bitter melon): 111009168
Entry
111009168         CDS       T05045                                 
Name
(RefSeq) probable splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111009168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcha03041]
    111009168
Spliceosome [BR:mcha03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    111009168
 Complex B
    111009168
 Complex C
   U2 SnRNP specific factors
    111009168
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin MBDa
Other DBs
NCBI-GeneID: 111009168
NCBI-ProteinID: XP_022137825
UniProt: A0A6J1C7R8
LinkDB
Position
Unknown
AA seq 811 aa
MLGSFGPILTLPAPSEDSKLTVQDEKDEIINNNDGDKDKTNSAPASVATHTKTIGIIHPP
PDIRSIVDKTAQFVAKNGPDFEKRIIANNAGNVKFNFLNSSDPYHAYYHHRLSEFRAQNQ
SSAQQPLQAADSAAPALAPSGPAADSNETLAAKPDVSALFKPVRKVLEPPEAEQYTVRLP
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
KVLMPPKGLTLKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW
HDFVVVEGIDFADDEDEDLPPPMTLEEVIRRSKISVAEEEIVEPGKEMEMEMDEEEMQLV
EEGMRTARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERVPAERDHTKFVVSPITGEL
IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE
EEVSNAVKAEIEKKKEDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDQNDGTNNDIRNLP
GPAALPPKPGVPSVRPLPPPPGLALNLPSLPPNAHYSTQISGGLPVPQPQPPVISMIPSV
QPPPPAMPGQQPYFMNRPPSMPPPMSMNAPNMGVPPPPGSQFTPMPVPRPFVPLPAPPPM
NTMMLPPPMPQGIPPPPMPQGSLPPLPPEEAPPPLPDEPEPKRQKLDDSLLMPEEQFLAQ
HPGPIRITVSVPNLDDGNLKGQVLGITVQSLTETVGSLKEKIAGEIQLPANKQKLSGKPG
FLKDNMSLAYYNVGAGEPLSLSLRERGGRKR
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgcttggctcatttggaccaatcttgacgcttccagctccttctgaggattcaaaactt
actgttcaggatgagaaggatgaaattattaataacaatgatggggataaagacaaaacc
aactccgcacctgcatcagttgcaactcatactaaaactattggtatcatacatcctcct
ccagacatcagaagcattgtcgataaaactgcgcaatttgttgcaaagaatggaccagat
tttgaaaagaggatcattgcaaataatgccggtaatgtcaagtttaatttcttgaattcc
tcagacccctaccatgcttactatcatcatagattgtctgaatttcgtgcccagaatcag
tcatctgcacagcagcctttgcaggcggcagattctgctgctcctgcattagccccatct
ggtccagctgctgacagcaatgaaacattggctgcgaagcctgacgtttctgccttgttc
aagcctgtacgcaaagttcttgagcctccagaggctgagcagtatactgttcgtcttcct
gaagggattacaggggaagaattggatattatcaagctcacagcccaatttgttgccaga
aatgggaaatcattcttgacaggattgacaagtagagagattaacaatcctcagtttcat
tttctgaaacctactcatagtatgttcatgttttttacctcacttgctgatgcgtattcc
aaagtgctgatgcctccaaaggggttgactctgaaactgaagaagagtgttactgacatg
acaacagtacttgagaggtgtgtgcatagacttgagtgggaacgttcgcaagagcaggca
aggcaaaaagctgaagatgagattgagcaagaaaggatacagatggctatgattgattgg
catgattttgttgtggtcgagggaatagactttgcagacgacgaggatgaagatttaccc
ccaccaatgactcttgaggaagtcattagaagaagcaagatttcagtcgctgaggaagag
atcgttgagcccgggaaggagatggaaatggagatggacgaagaagagatgcaacttgtt
gaagagggtatgcggactgctaggttaggagaaaatgacaatgacaagaatgatatgaag
gtagatgaggagccagagccaccaatgagaattgtaaagaactggaagagacctgaagag
agggtccctgcagaaagggatcatacaaaatttgttgtctctccaatcacaggtgagcta
attcccatcaatgaaatgtctgaacacatgaggatttcacttatcgatccgaagtacaaa
gagcaaaaggaaagaatgtttgccaagattcgggagactacacttgctcaggatgatgag
atctcacgaaacatcgttggactggcgcgaactcgtcctgatatatttggtaccaccgag
gaggaagtatcaaacgcagtgaaggcagaaattgaaaagaagaaagaagatcaaccaaaa
caggtcatatgggatggccatactggaagcattgggcgtacagcaaatcaagcaatgtca
cagaatctcgttggagaggatcagaatgacggtactaacaatgacataaggaaccttcct
ggccctgcagctctgccacccaaacccggagtgccatcagttcgtcctcttccgccccca
cctggactagccttgaatcttccttccctacctccgaatgcacactattctacccaaatt
agtggtgggcttcctgtaccccaaccacagccacccgtcatctctatgattccatctgtt
cagccaccacctcctgcaatgcctggacaacaaccttatttcatgaatcggccgccttct
atgcctccaccaatgtctatgaatgcaccaaatatgggtgtaccaccaccacctggatct
cagtttactccgatgcctgttccacggccttttgttcctcttcccgcccctcctcctatg
aataccatgatgctgcctccacctatgccacaaggaatccctccaccacctatgccccaa
ggatcgctgcctccattaccacctgaagaagctcctccgccgcttccagacgagccagag
cctaagcgacagaagcttgatgattctttgcttatgcctgaagagcagtttttggctcaa
catccaggacctatccgcatcactgtatccgtcccaaatctggacgatggaaacctcaaa
ggccaagttctggggatcacagtccagtccttaactgaaactgttggaagtttaaaggag
aaaatagccggtgagatccagcttccagcaaacaaacagaaattgagtggaaaacctggg
tttctcaaggacaacatgtcgcttgcatattacaatgttggagcaggggaaccactttcc
ctctctttaagggaacgtggtggtagaaagagatga

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