Momordica charantia (bitter melon): 111009180
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Entry
111009180 CDS
T05045
Name
(RefSeq) SAC3 family protein B isoform X1
KO
K23719
nuclear mRNA export protein SAC3
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111009180
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
111009180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
111009180
NCBI-ProteinID:
XP_022137840
UniProt:
A0A6J1C7T2
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MSYQGFGKASGPSAPPKLQHSFGSSARPVSVSPSPSTFPAFSDASPPRAPRVQSHPMAFQ
TTGAAPSLHHQYDRGPRATVRMGSPSLAFESTRSAATESYSYPSVGSRGPILFPTRSVEE
QHSSFKAVDAQSHPSRGITSVASPQTSDHAVGEVAHLLTKRSRSPTYMPGDEKLSKIAGH
PVIRRPASSSHTFDNQPKMRGIHVNSHSYQDQYPSKRSYDQDTNILTGFGNVQAPKGNRS
PEQPSASDLRYAQSNLQRSSISPPRSFSRLNAHEVGGSMKNVYSESEATKPNSVLVPKRT
RSPPLPSSDLVFGGNSHSTCDDAERERLAKAKRLVRFKDELVEAARSNLGSMDERDNGNK
NEHSMADPNKYLSNQSLKLSGNVADGNMPDYEALESSSIIVGLCPDMCPESERAERERKG
DLDHYERLDGDRNHSSKLLAVKKYNRTAEREANLIRPMPILRKTIDYLLNLLSQPYDEKF
LGTYNFLWDRMRAIRMDLRMQHLFNEDAITMLEQMIRLHIIAMHELCEFSKGEGFAEGFD
AHLNIEQMNKTSVELFQMYDDHRKRGIIVPSEKEFRGYYALLKLDKHPGYKVEPAELSLD
LAKMTPEMRQTPEVKFARDVARACRTSNFIAFFRLVRKASYLQACLMHAHFAKLRTQALA
SLHSGLQNNQGLPIAHVCKWIGMEEEDIEGLLEYHGFLIKVFEEPYMVREGPFLNSDKDF
ATKCSKLVHMKRSRMIVNDVSPCSQNENLITGATKEIPLPRIRKESQTFSFEKISSPRTV
SAKKESSIRVTNEEMTEFDDQPTPVDHKQVQPMIETPKVSQLHEYNHEVDGALVQQSGLR
SCEPLKTEIKFVGNQNYDGLFTTSSMKNISTGIGVSLPLVTEASLQNISVCGYNDSAMER
VEPQILVNNVMEDKETLYASVENKQDIVMESCQDEEIANARLKLILRLWRRRALKKKQLR
EQRVLAAKAAFSTLSVGPPVQLNNHKIRSIGVFDIDHTLRERWKKQELSWSIVNVSDVVA
STMSRRNVDVKCICWKLVICSQMDNVGDLDQMGQDSRFAAGYWLLSKLMPSKADDLVLSS
SFLSIWRSWISSEIGANLSCFLSIVKDTEFDNLTETVHGASAILFVATESIPWELQRVQL
HKLLMSIPSGSCLPLLILSDSHDEVSASSMLVNKLGLYDIDKSRIHSFQVVSLLENPHLR
HLGFFSDEKLKEGLKWLANESPPQPVLHRVKVLNLIITHLNSSIEMLDSMKENDVSPNQC
ISAFNLALDQSLTDVTAAAKENPSNWPCPEIALLESTDEHTITTHALPPVGWSSVENVEP
LRQALMDLKLPSFPDMSWLSKGSNMVNEIPNHRDYLESCLISYLNQTSEIMGQQLAMEEA
HIMLQKSAKLELQKFKYFIVPDWVTIFRRIFNWRLRYLAGRSSYVHIVDCYHSVSPTSGV
KLERREPPSYRPDQPLLDELIEAACSSLSIDQRTQLPDAHQPLAAMTSNSRPPEVAAVAI
DFSDNDRDSTREIGFVSSECVPNLGQRLSCTGKELVASSTVYSEAVRLNELLDRCNELQD
AIEKKLSIYF
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtaccaggggtttggcaaggcttcaggacccagtgcaccgccgaaattgcaacat
tcatttggaagttcagcgcgtcctgtttcagtttctccttctccgtcgactttccctgca
ttttccgatgcttctcctccacgggctcccagagttcagtcacatcctatggcttttcaa
accactggcgctgctccaagtcttcatcaccaatatgatagaggacctcgggctacagtt
agaatggggtctccaagcctggcttttgaaagcaccagatcagctgcaactgaaagttat
tcctatccatcagtgggctctagagggcctattttgtttcctacaaggtcagttgaagag
caacattcttccttcaaagctgttgatgcccaaagtcatccaagtcgtggaattacatct
gttgcctcaccccaaacgtcagatcatgctgtaggtgaggttgcccacctccttacaaaa
agaagcaggtcacctacttacatgcctggagatgaaaaattatcaaaaattgccggtcac
cctgtcattagaaggcctgcttcatcttcccatacatttgacaatcagccaaagatgcga
gggattcatgtgaactcacattcctaccaagaccaatacccttctaaacgatcttatgat
caggatacaaatattctaactggatttggtaatgttcaagcaccaaaaggaaacaggtca
ccagagcaaccatctgctagtgatcttcggtatgcacagagtaatttgcaaaggtcttct
atctctcctcctcggtcgttttctagattaaatgctcatgaagttgggggttccatgaag
aatgtttattctgaatctgaagcaactaagcccaacagcgtcctagttcccaaaagaaca
aggtcgccacctttgccatcatcagatctagtctttggtggaaattctcattctacttgt
gatgatgctgaacgagaaaggctagctaaggcaaagagacttgttcggtttaaggatgaa
ttagtcgaagctgcacgtagcaatttgggtagtatggatgaaagggataatggaaataaa
aacgagcactcgatggcagatccgaacaaatacttgtcaaatcagtctctgaagttatcg
gggaatgtggctgatgggaacatgcctgattatgaagccttagaatcatcaagcataata
gttgggctatgcccagatatgtgtccagagtcagagagggcagaacgagaaaggaaaggg
gatcttgaccattatgagcggttggatggggatagaaatcattctagcaaattgcttgca
gttaaaaagtacaacaggacagctgagcgggaagctaatctcataaggcctatgccaatt
ctgcggaaaacaattgattatctgctcaatttgttaagtcaaccttatgatgaaaagttt
ttaggcacatataacttcttatgggataggatgcgggcgattcgcatggacttgagaatg
caacatctttttaatgaagatgccattaccatgctggaacaaatgattcgtcttcacata
atcgcgatgcatgaattatgtgaattctctaaaggagaaggctttgccgagggatttgat
gcgcaccttaatattgaacaaatgaacaaaacgtcagtggaattgtttcaaatgtatgat
gatcacagaaagagaggcataattgtgccctctgaaaaggaatttcgaggttattatgca
cttctcaagctggacaaacatcctggatataaagttgaacctgcagagctctcacttgat
cttgcaaagatgactcccgagatgcgacaaactccagaagtcaaatttgcccgtgatgta
gctagagcttgtaggacgagtaatttcattgccttctttcgtcttgtgaggaaagcaagt
tatttacaagcatgcttaatgcatgctcactttgcgaagttgcgaacacaggctcttgca
tcactgcactctggtcttcagaataaccaaggactaccaattgcccatgtctgtaagtgg
attgggatggaggaagaagatattgaaggccttttagagtatcacggttttctgatcaag
gtatttgaagagccttatatggttcgtgaaggtccatttcttaatagcgacaaggacttt
gctaccaagtgctcaaaactcgttcatatgaagaggtcaagaatgatagtaaatgatgtc
tcgccttgcagtcaaaatgaaaacttgatcactggtgcaaccaaagaaattccgttgcca
aggattagaaaggaatcacagaccttttcttttgaaaagattagttctccccgtactgta
tcagctaaaaaggaaagttccatacgtgtaacaaatgaagaaatgactgaatttgatgat
cagccaactccagtagatcacaagcaagtgcaaccaatgattgaaacaccgaaagtcagc
caattgcatgaatataaccatgaggtggatggtgctctcgtacaacaatctggtcttaga
tcatgtgaacctttgaagactgaaattaaatttgtaggcaatcaaaactatgatggtctt
ttcacgacctcttcaatgaaaaacatttctactgggataggagtgtctttgccacttgta
actgaagcatcacttcagaatatatcagtttgtggttataatgatagtgctatggaaaga
gttgaaccccagatcttagtcaataatgtgatggaagataaagaaactttgtatgcttct
gtggaaaataaacaagatattgttatggaaagttgtcaggatgaagaaattgcaaatgca
aggctgaagttgatcttaaggttatggaggcgtcgagctctgaagaaaaaacaattacgt
gaacaaagggtattagccgctaaagcggcatttagcacattgtccgtgggaccaccggtc
caattgaataaccataaaattagaagtattggtgtgtttgacatcgatcataccttgagg
gaaagatggaagaagcaggaattgtcatggtccatagttaatgtttcagatgtagtagct
agcactatgagcagaaggaatgtggatgtgaaatgtatttgttggaaacttgttatctgc
tctcagatggacaatgttggtgatctggatcagatgggccaagattctcgttttgcagca
ggttattggttgctttctaagctcatgccttctaaagctgatgatctagtcttatcatct
tcttttctttccatttggaggagttggatttcttccgaaattggtgcgaatctaagttgt
ttcttgtccatagttaaggatacagaatttgataatcttacagagaccgtgcacggggca
agtgcaatcttatttgttgcaacagaaagcatcccctgggagcttcaaagagtccaactc
cacaagctgctgatgtcaataccttctggttcctgcttgccccttctgattttaagtgat
tcacatgatgaggtttctgcctcttccatgctggtgaataaattgggcttatatgatatt
gataaatcaaggatacatagttttcaggtcgtttcactcttagagaacccccatttgagg
catttggggtttttcagtgatgagaaactcaaggaaggactaaagtggctagcaaatgaa
tcaccaccacaacctgtccttcaccgcgtcaaagtgctcaacctgattattacccatttg
aattcttctatagagatgcttgattcaatgaaagaaaatgacgtttctccgaaccagtgt
atctcagcatttaatcttgccttggatcagtcgcttacagatgttactgctgctgccaag
gaaaatccttcaaactggccttgtccggagattgctttgttggagtctactgacgagcac
acaataacgactcatgctttgcctcctgtaggatggagctcagtcgaaaatgtcgaaccg
cttaggcaggctttgatggacctgaagcttccatcttttcctgatatgtcatggttgagc
aaaggctcaaatatggtaaacgagatacctaaccatagagattacctagaaagttgcttg
attagttatctgaatcaaactagtgagataatgggacaacagcttgcaatggaagaggct
catatcatgctccaaaaaagtgctaaacttgagctccagaagttcaaatactttatcgtt
ccagattgggtgactatttttagacggattttcaattggaggttgaggtacttagctggc
aggtcctcttatgttcatattgtggattgttaccacagtgtctctccaacgagtggtgtg
aagcttgaacgtagggaaccgccatcttatcgtccagaccagccacttttagatgaacta
attgaagcagcttgcagctccctctcaattgaccaaaggacacaactgccggatgctcat
cagcctcttgctgccatgacgtcaaatagtaggcctcctgaggttgctgctgtagcaatc
gatttttcagacaatgatcgcgatagcacacgagagattggctttgttagttctgagtgt
gtacctaatttgggtcagagactaagctgtacaggtaaagaactagtcgctagcagcacc
gtatattcagaagcggtaagactgaacgagttgttggatcggtgtaatgaactacaggat
gccatagaaaaaaagttgtccatttatttctaa
DBGET
integrated database retrieval system
