Momordica charantia (bitter melon): 111009186
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Entry
111009186 CDS
T05045
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111009186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111009186
03009 Ribosome biogenesis [BR:
mcha03009
]
111009186
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111009186
Spliceosome [BR:
mcha03041
]
Complex A
U1 snRNP components
U1 related factors
111009186
Complex B
111009186
Ribosome biogenesis [BR:
mcha03009
]
Eukaryotic type
Pre-60S particles
Helicases
111009186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
RSRP
Motif
Other DBs
NCBI-GeneID:
111009186
NCBI-ProteinID:
XP_022137851
UniProt:
A0A6J1C7W7
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
METGESAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
LGPHPSASTSKPASIPEAHSMPTNGTLTPHGQPNHHVPQQEGQSNSQLSQQPGHLISQQH
SSVTGHVNVNHHPGMQMAPDGRQHSAQPNQVMQQPGMFAMSSQHLGQQHVMQQSQKMAHK
NQQMAQHPPNQQVLQNPGQQIPQPSIQNLGQPNMQNQTPLVGQPQGPQYGQQQLQYMGYQ
QSVHPSVQQNSQQQVKQSPLGQPFVNHLEQKSGFLNREEDNLQSGNQVGFSSSQFQQSGG
TSSIHNLHPGTNSSQMQQFGLATDQARHFGGSPGNLQQQHSVVQLQHAGTELTHRQHHSR
FQDQMGPAVMQGQQAGAENLPGRAGNEFYFGRNEGPGTGPHQPRLAAIPMARSQQETRMG
GVPFPSVAPGHPSGTNFAAGHSHSMYSHGSGGPSLPNNALIGPPHVVASDVTNMSPVEVY
RQQHEVTATGDNVPAPFMTFEATGFPPELLREIYSAGFSSPTPIQAQTWPIALQGRDIVA
IAKTGSGKTLGYLIPAFILLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRSSRVC
CTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKMINFRQVSLLVLDEADRMLDMG
FEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQY
VEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGE
RDWVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATG
VAYTFFSEQDWKYAADLIKVLEGADQHVPPELRDMAMRGGPSFGKDRGGMGRFDAGMGGS
RWDSGGRGGMRDGGFGGRGGARDGGFGGRGGMRDGGFGGRGNMRDGGAAGGRGGRGDFFP
GRGNRGRGFGGPPGGHVGWGRGDRGGPHDRYNSVDGRGRGRGQGRFDSRRDFSNRSRGRS
YSRSPERVRTWGYSRSRSRSGSHSRSSRSWSRSRSRSRSRSRSRSRTRSRSWSRRYSRSR
SRSRNHDNHERSRESNFDRKDDLPPPESVTASSPGTQKSAFEERDDARQFPPASGIGNNN
IEPGNPENGADMSDQIVNAAPPQVI
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggagactggggagtctgctcccccttccctcggtcctcgttatgcacccgacgatcct
actcttcccaagccttggaaggggttgattgatgggagcactggactattatactactgg
aaccctgaaaccaacgtcactcagtatgagaaaccagtctctttgccaccaccactgcca
ctcggtcctcatcctagtgcctctacttccaagcctgcttcaattccggaggctcattcc
atgccaacaaatggcacattaacgcctcacgggcagccaaaccatcatgtccctcaacaa
gaaggccaatcaaacagccagctttctcaacaacctggacatttaatatcacagcaacac
agttctgttacagggcacgtaaatgttaatcaccatcctggtatgcaaatggcaccggat
gggcgtcaacatagtgcgcaaccgaatcaggtcatgcagcaaccagggatgtttgcaatg
tcatcacaacatcttggccagcagcatgtcatgcaacaaagtcagaaaatggcccataag
aatcaacaaatggctcagcatcctcctaaccagcaagtcttgcagaatccaggacaacaa
ataccacagccatcaatccagaatctaggacagccgaacatgcaaaatcaaaccccatta
gttggccagcctcaaggtccgcaatatggtcagcagcagcttcagtatatgggttaccag
caaagcgtacatccaagtgttcagcaaaattcacagcagcaagttaaacaaagcccttta
ggtcaaccatttgttaatcacctcgaacagaagtcgggttttctgaacagagaggaggat
aaccttcagtccggaaaccaagttggattttcttcttctcagtttcaacaaagtggtggt
acctcatctattcataaccttcatcctggaaccaattcttctcaaatgcaacagtttggt
ttagctacagatcaagcacgacattttggtggctctccaggaaacctgcaacagcagcat
tctgtggttcagttgcagcatgcaggtactgaattgactcatcgccaacatcattctaga
ttccaagatcaaatgggcccagctgtgatgcaggggcagcaagctggtgctgaaaatttg
cctggcagagctggaaatgaattttactttggcaggaatgaggggcctggcactggtcca
catcaaccaaggcttgcagccataccaatggcaaggagccagcaggaaacaaggatgggt
ggtgttccatttccaagtgtggcacctggtcatcctagtgggacaaattttgcggctggg
cactcacatagcatgtatagccatggatctggtggtccatcattgccaaataatgctctg
ataggccctcctcatgttgtagcatcagatgttactaatatgtcgcctgttgaagtttat
cgtcaacagcatgaagtaactgctacgggtgacaatgttccagctcctttcatgacattt
gaggctactggcttccctccagagctactgagagagatatattctgctggattctcatct
cctacgccaattcaagcacaaacatggcccattgccctgcaaggtagggacatagtcgca
atagctaaaacggggtctggaaaaactttgggctatttgattcccgccttcattcttctt
aggcagtgccgaaataatccacagaatgggccaacggtgttggttttggctcctactagg
gagcttgctactcaaatacaagatgaggcaattaaatttgggaggtcttccagggtctgt
tgtacgtgcttgtatggtggagctccaaaaggtcctcagctgaaagaattagatcgtggt
gctgatattgtcgtggcaactcctggccggcttaatgatatactagaaatgaagatgatc
aactttaggcaagtttcacttcttgtacttgatgaagctgatcggatgcttgacatggga
tttgaacctcaaattcggaagattgtgaatgaaataccaccacgcagacaaactcttatg
tatacagcaacctggcccaaggaagtaagaaaaatcgcgaatgatcttctcgtcaactct
gtccaggtgaatattggtagcgttgatgaacttgctgctaacaaggctatcacacagtat
gttgaagttgttccacagatggaaaagcagagacggttggagcagatccttaggtcccaa
gaacggggttctaaggtaataattttttgttccactaagaggttgtgtgatcagcttgca
cggaatcttgggcgtggtttcggggctgctgcaattcatggagacaaatcacagggggag
cgtgattgggtattgaaccagtttcgtagcggaaagtctcctatactagttgccacagat
gttgctgcccgcgggctcgacatcaaagatataagagtggtgatcaactatgattttccc
actggaatcgaggattatgttcaccgaatcggaagaactgggagagctggagcaacggga
gtcgcatataccttcttctctgaacaggattggaaatatgctgctgatttgattaaagta
ctagagggtgcggatcagcatgtgcctcctgagttgcgagatatggctatgcgtgggggg
ccgagttttgggaaggataggggtggtatgggtcgttttgatgccggtatgggtggcagt
cgctgggattctggaggccgaggtggcatgagagatggtgggtttggtggtcgtggtggt
gcacgagatggtgggtttggtggccgtggcgggatgagagatggcgggtttggtggacgt
ggtaacatgagggatggtggtgctgctggtggacgtggtgggagaggcgatttctttcct
gggcggggtaatagaggacggggctttggtggccctcctgggggtcatgttggttgggga
aggggtgatcgtggtggcccgcacgataggtacaacagtgtggatggacgaggacgtgga
cgtggacagggtcgatttgatagcagaagagacttttccaataggagtagaggtagaagt
tatagccgtagccctgaaagagtccgaacatggggttacagccgaagtcgaagtcgcagt
ggtagccatagtcgtagcagtagaagctggagtcgcagtagaagtcgtagcaggagcaga
agcaggagccgaagtagaactaggagtcgaagttggtcacgccgttatagtcgaagccgt
agtcgtagccgtaaccatgataatcatgagcgatcacgtgagtcgaacttcgatagaaaa
gacgatctacctcctcccgaatcagtcacagcttcatctcccggcacacaaaagagcgca
tttgaagaacgagacgacgctaggcagtttcctccagcgtccgggatcgggaacaataat
atcgagccagggaatccagagaatggtgcagatatgagcgatcaaattgttaatgcagct
cctcctcaagtaatatga
DBGET
integrated database retrieval system
