Momordica charantia (bitter melon): 111009207
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Entry
111009207 CDS
T05045
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03440
Homologous recombination
mcha03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111009207
03460 Fanconi anemia pathway
111009207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcha03032
]
111009207
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111009207
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
111009207
DNA replication proteins [BR:
mcha03032
]
Eukaryotic type
DNA Topoisomerases
111009207
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
111009207
FA (Fanconi anemia) pathway
111009207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Gp-FAR-1
Motif
Other DBs
NCBI-GeneID:
111009207
NCBI-ProteinID:
XP_022137893
UniProt:
A0A6J1CBL5
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MVASTVLMVAEKPSIALSIASALSHGQMSTRKGSTDIHEFDGRFLGLHAHYKVTSVIGHI
FSIDFPDRFQNWTTTDPLDLFQASVIKTESNPKAHIRQHLSREARGCDCLVLWLDCDREG
ENICFEVIECTGFGGNEFRKKVYRARFSSVTEKDILKALDNLVQPNRNEALAVDARQEID
LKVGVAFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCP
YIMQNGYELNLDWERGKLFDCDVAVMFQKRVTEDGIVEVTEISEKQESKHRPSGLNTVNL
LKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHSLLKNPEWGDY
VRVLLSDGYSKPRSGTDAGDHPPVTPMCLATEDMLGRDAWRLYQYVCQHFIGSLSPDCKY
TRTKIQFSIAGEIFHCTGVHVMAKGFTSIMPWLAVNEKKLPQFLKGEKIEVARVDLYQGN
TTPPDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTALGITLIRG
YQCIDPDLGLPDIRSFIEQQITLVAKGQVDHFSVVQNALQQFKQKYSYFVKKIDHMDALF
EAQFSPLADSGRSFSKCGKCLRYMKFISSQPQRMYCNTCEEVYYLPQKGTIKLYKELTCP
LDNFELLIFSLPGPEGKSFPLCPYCYNSPPFEGIDALYGAAKTTQSSGKSTKGIGMPCFL
CPHPTCRHSLITQGVCACPECSGTLVLDPVSAPNWRLNCNKCNFLVFLPQGAHRISTTND
KCDECDSKIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFFRGRGSRGRS
RGRGRGRGGRGRGAGRSMDPKMSFRDF
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcttcaactgttcttatggtggcagagaagccaagcattgcgctctcaattgct
tctgcactctctcatggccaaatgtctacgagaaagggtagcacagatatacatgaattt
gatgggagatttcttgggcttcatgcacattataaagtgacatcagtcattggacatatt
ttcagtatagatttcccagatagatttcaaaattggacaaccactgatcccttggatctt
tttcaagcttcagtaattaagacggaatcaaatccaaaggctcatatacgtcaacattta
agtcgagaagcacgtggttgtgattgtttggtcttatggttggattgcgatcgtgaaggt
gaaaatatttgtttcgaagttattgagtgcaccggatttggtggcaatgaatttcggaaa
aaagtgtatcgtgcaaggttttcttctgttactgaaaaagatattttgaaggctttggat
aaccttgttcaacctaatagaaatgaggcactggctgtagatgctcgacaagagatagat
ttgaaagtaggagttgcctttacgcgttttcagactaccttctttcagggtaaatatgga
aaccttgattccagactcatctcctatgggccatgccaaactcccacacttgggttttgt
gtacagcgtcatttgcaaataactacttttaagccagaaaaattttggtctgtgtgccct
tatattatgcaaaatggatatgaacttaatctagactgggagcgtggcaagttattcgat
tgtgatgttgctgtaatgtttcaaaagcgggtaaccgaagatgggattgtagaagtaaca
gaaatatctgagaaacaagaaagcaaacatcggccttctggactaaatacagtgaacctt
ctgaaggttgcttcaagcgcactaggctttggacctcaaatggcaatgcaactagctgaa
cgattgtatacacaaggattcatcagctatccacgtacagagagtacagcttatccttct
tcatttgacttcaaaggcactctacactcccttttgaaaaatccagaatggggtgattat
gtacgggtgcttctatctgatggatacagtaaaccacgatcaggaactgatgcaggtgat
catcctcctgttactccaatgtgtttagcaactgaagatatgctagggagagatgcttgg
agattgtaccagtacgtgtgtcaacacttcattgggtctctgtctcctgactgcaagtat
actaggacgaagatacagttttcaattgctggagaaatattccattgtactggggtgcat
gttatggcaaaaggattcacctccattatgccatggttggcagtaaatgaaaagaaacta
cctcagtttctgaagggagagaaaatagaagttgcaagggtggatctttatcagggtaac
accacgcctcccgattatttaagtgaaagtgagttgatttctctcatggagaagcatgga
ataggcacagatgcatcaatacctgtacacattaacaacataggcgaacgcaactatgtg
caggttcaagctggaaggaggttggttccaactgccctaggtatcactttaatcagaggt
tatcaatgtattgacccagatctcggcctaccagatattcgaagtttcattgagcaacag
atcactcttgttgccaagggtcaagtagatcattttagtgttgtgcagaatgcactgcaa
cagttcaagcaaaagtacagctacttcgttaagaagattgatcacatggatgctctgttt
gaagcacaattttctcctcttgctgattctggacgctcttttagcaaatgtggcaaatgc
ctgcggtatatgaagtttatttcttcccaaccacagcgcatgtactgtaatacatgtgag
gaggtttattatcttccgcagaagggaacaataaagctgtataaggaacttacatgtcct
ttggataacttcgaacttttgattttttccttacctggcccagaaggcaagtcatttcct
ctttgcccatactgctacaatagtcctccatttgagggtatcgatgcattatatggtgct
gctaaaaccacccaaagttctggaaaatcgaccaagggaattggtatgccatgcttcctc
tgcccacacccaacatgtcgacattctttaataacccaaggagtctgtgcttgcccggaa
tgtagcgggacgcttgtcctagatccagtgagtgcacccaactggagactcaactgcaac
aagtgcaatttccttgtcttccttcctcagggtgctcataggatctctaccactaacgac
aagtgtgacgaatgcgactcgaaaattatagaagtcgacttcaacaagaaaactacacca
ttggaggacggagctacactgtttgttggctgcattctttgtgatgagtttctccattca
cttttggagatgaagcatggaaaatcattcttcagaggcagaggttccagaggaagaagt
agaggaaggggaaggggaaggggaggaagaggacgcggtgcagggagatcgatggaccca
aaaatgagtttccgagatttctga
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