KEGG   Momordica charantia (bitter melon): 111009271
Entry
111009271         CDS       T05045                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111009271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcha03021]
    111009271
Enzymes [BR:mcha01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     111009271
Transcription machinery [BR:mcha03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     111009271
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 111009271
NCBI-ProteinID: XP_022138042
UniProt: A0A6J1C950
LinkDB
Position
Unknown
AA seq 1194 aa
MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFN
EYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK
PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDK
DLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR
RLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
LGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTS
FPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELA
GELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAH
PFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP
DGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGI
CADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKS
KGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSC
GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCL
GTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY
KADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES
GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL
ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVD
AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP
LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVI
QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC
NT seq 3585 nt   +upstreamnt  +downstreamnt
atggggacatcgtcgggtgcaaaggacgatatagagatgaatagtgaggcagaatactat
tcacctggaactgatatggatacagacgatgatgattattctgaggcagtcaacatacgc
gaaattggggaagggtttttaaaggatttctgtaagaaggcatcgatggcattttttaat
gagtatggtcttatcagtcaccaaattaactcatacaatgactttatagaaagtggtctt
cagaaggcctttgactattttggtgagattgtggttcagccaggatatgacccctctaag
aagggagatggggaatggagatatgcttcagtgaagtttggtaaggtaacgcttgataag
ccaaagttctggggtggggcagcaagtggaaaagagtataacatgcttcctaggcatgct
cgacttcagaacatgacttattcatcaaggatgaaaatgaatattaatgtagaggtgtat
actcaaaggttagtcagaagtgacaaatttaaaactgggaaagatcaatatgtcgacaaa
gatcttttaagtcaagataacagggagatatttataggcaggctacctgtgatggtgaat
tctgacctttgctggatgaaggaagagcagaaacgtgactgtgaatttgatcatggaggt
tattttttaatcaaaggtgcagaaaaaatatttattgctcaagagcagatttgtttgaga
agactctggatttctaatatccaaggttggactgtggcatacagatcagaagttaagagg
aatagactaattattagactagtagaaaattccaagtctgaagaacttaaaagcaaggag
aaagtcctcaatgtatatttcttgtccacagaaattcccgtgtggattttattctttgcc
ctaggtgtttcatcggacaaagaagtagtagatctaattgattatggcagggacgatcca
actgttctgaatattctctttgcctctgttcgtgaagttgataatgatgataagtggaaa
gattttcgaagaggtaaaaaagctctgaattatttggacaatgagattaaaaagaccagt
ttcccacctactgaaaaaattgaagattgccttaacctgtatctttttgccagcttgaaa
ggcttaaagcagaagtgtcgttttcttggttatatggttaaatgtatcctgcaagcctat
actggccgtagaaaaagtgataacagggatgattttcgcaataagaggttcgagttggct
ggagaattgcttgaacgagagattaaagtgcatattgcacatgcacggagacgcatggaa
aaggctttgcaaagagacctttatggagatcgtgaagtgcgcccaattgaacactatttg
gatgcttccataatcactaatggtctatcccgagcattctctactggagcatgggcgcat
ccattcaagaggatggaaaggatttcgggtgtcgtggcaacgcttggtcgtgctaatccc
ctgcagacaatggctgaattgaggagaacacgtcaacaggttgcatacacggggaaagtt
ggcgatgcaagatatccgcatccttctcactggggaagggtttgctttctctccaccccg
gatggtgaaaattgtgggcttattaaaaatatgtccatcacaggtctagtaagcttaaac
acattgaagcctatagttcccacattgtttcggtgtgggatggagaatttggtggacgat
acatttactcctcttagtgggagctacaaaatttttctcaatggggaatgggttggcatt
tgtgctgattccgtttcatttgtgacaaaactgagacgcaagcgacgaaggaatcaatca
ctgcatcaggtagaagtaaaaagagatgaacaactgaaggaagtacgtatattttcggat
gctggaaggatattacgtcctctcttagttgtagagaacttaaacaagatcgataagtct
aagggagaaaataacactttccaatcccttttggacaagggaataattgagcttattgga
actgaagaagaagaagactgccgtacagcttggggtattaagtatctgatggaaaatgaa
gggactacgaaatattcccattgtgaactcgacatgtcatttttattaggattaagctgc
ggacttgtcccatttgcaaatcatgatcatgctaggagggttctgtatcagtcccagaaa
cactctaatcaagccattggattttcaacaactaattccaattttcgcgttgatactcta
tctcatcagttacactatccgcaaaggccactttttcgtacaatgaatgctgattgtctt
ggaacacctggatacctgtcatctcacagtgggatatccccaagacccgagttctacaat
ggtcagaatgctattgtggcagtcaatgttcacctgggttacaaccaagaagattcttta
gtgatgaaccgggcctctctggagcgtggtatgttccgatctgagcacattcgcagttac
aaggctgatgtagataataaagaatcctccgaaaagaggaggaaatctgatgacgcaata
aattttggaaagactcagagtaaaattggaagggtggacagcttagatgatgacggcttc
ccttacattggtgcaaacttgcagagtggagacattgtcattggcaggtgtgctgaatct
ggggcagatcacagtatcaaactgaagcacactgagaagggcatggttcagaaagtcgtg
ctctcttctaacgatgatgggaagaattatgctgttgtatgcctgagacaggttcgttcc
ccatgtcttggagacaagttctctagcatgcatggacaaaagggagttcttggctttctg
gagtctcaagagaatttcccattcaccatccaggggatagttccagatattgttataaac
ccgcatgcttttccttcgcgacaaactcctggtcaactattggaagctgctctcgggaaa
ggcattgctgctggcggttcgctgaaatatgccactcctttctccactccttccgttgat
gccattacagaccagcttcacagggcagggttttcaagatggggtagcgagagggtgtac
aatggccgaactggtgaaatgatgcggtcactcatattcatgggtccaacattctaccag
cgcttaatccacatggctgaagacaaggtaaaattccgcaacaccggccccgtccaccct
ctcacccgacaacctgtcgccgacaggaagcgttttggcgggatcaagtttggcgagatg
gagcgcgactgccttatagctcacggggcctcagccaacttgcacgaacgcttgtttacc
ctcagcgactcttcccagatgcacgtctgccagaaatgcaagaatgtcgcaagtgtgatc
caacgatcagtggccggtggtcgcaagataaggggcccgtattgtcgggtttgcgagtcg
gtcgacgacattgtgagggtgaacgtaccgtatggagccaagttgctgtgccaggagctg
ttcagcatgggcatcaatctcaagtttgaaacacaactgtgttga

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