KEGG   Momordica charantia (bitter melon): 111009561
Entry
111009561         CDS       T05045                                 
Name
(RefSeq) splicing factor U2af large subunit A
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111009561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcha03041]
    111009561
Spliceosome [BR:mcha03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111009561
 Complex B
    111009561
SSDB
Motif
Pfam: RRM_1 RRM_occluded RBD_DEAH11 RRM_9
Other DBs
NCBI-GeneID: 111009561
NCBI-ProteinID: XP_022138369
UniProt: A0A6J1C9Y6
LinkDB
Position
Unknown
AA seq 900 aa
MSTHSCSKKYSRSSVKHTLYNTNDESAARTRPFSFEDIMLRRKNKGSAANVEGGATVAGS
RSRRDSIDNDITDNRESERLFRHSRGSSLDVQNLPLEESAKISSRRKKEETLLKDSTVVR
SDRNNYESGLTLMGKVKYETNGKDKGQKYGQENLGWGKSDQRTRIDIENESGKRHSRDLA
GKDRREDRGRGKFERESKRKYQNGDDDKNRDRYSEKKHDHSKHRDLENRDRKEAKVSLSS
HYEDSRFKRRRKRSQDRESKHRRSVSLSPRAHKHSTKLVRHKELPDSHLKKSGRWRSDSD
RTGDFTNSSTSQYRRHSGSTSGLGGYSPRKRRTESAIKTPSPVRSPEKKNEALDLLPADK
VGLFSGSVTSIFQPSNPTVSSVISTDQSSGALFSSAMGKSLSGVSSNNLPMKTANVSLDL
IQLTQATRPMRRLYIENVPHSASEKAVIECMNGFLTSSGVNHIEGTQPCISCIIHKDRGQ
ALVEFLTPEDASAALSFDGTNFSGSILKIRRPKDYVEIVTGDLDKSEAVVNEISDVVEDS
PNKIFIAGISNRISSEMLRDIVTSFGPLKAYHFEINGDLNEPCAFLEYVDQSVMPKACAG
LNGMKIGGEVLKVFSAVPFAPLERNGCQPCYGIPEHVKPLLQQPTVVLKLNNVFGADVLP
VLSESNIDEVLEDIRFECARFGTVKSMNVVKPCNSFVGAEEKYKNTNDVEIKHGIQGNST
LVPSRNDNDLEDDEANLNDRPNEVVENKLCQMGNDDAPCFEDVACENTLESIPGGIPGRQ
SSPGNELRDTNVAEMVETDEKGSDNKSMLLDDSTTVGADSKKKVLNGLDAMVRTDSDAFE
KVEKKDPRTNLFVLGSVFVEFGRMEASCMAAHSLHGRIYDGQEICIEYIPHDLYRKRFPK
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgagcacacatagttgctcaaaaaaatacagtagaagcagtgttaagcataccctgtac
aacactaatgatgaaagtgcagctcggactaggcctttcagctttgaagatattatgctt
agaaggaagaataaagggtcagctgctaatgttgaagggggtgccacagtagcagggagc
cgttcaagaagggatagcatagataatgatattactgataatcgtgaatctgaaaggctt
ttccgccacagtagaggttcttctcttgacgtgcaaaatctcccattggaggaatcggcc
aagattagttcgagaaggaaaaaagaggagacattgttgaaggatagtacggtggttagg
agtgatagaaataattatgaatctggattgacattgatgggtaaggtgaaatatgaaaca
aatggaaaggataaaggacaaaaatatggccaggaaaaccttggttggggaaagagtgac
cagcgaacaaggattgatattgaaaatgaaagtggaaagaggcattcaagagatctagct
ggcaaggatagacgtgaagatcgtggtaggggaaaatttgaaagagaaagtaagagaaaa
tatcaaaatggtgatgatgacaagaatagagacaggtacagtgaaaagaaacatgatcac
agtaaacatcgtgacctagaaaatcgagatagaaaggaagctaaagtatcattaagttca
cattatgaagattctagatttaaaagaagacgaaaaagaagtcaagatcgagaaagtaaa
catagaagatctgtttcactttctccaagggcacacaagcactcaactaagttagtgagg
cataaggagttgccagattctcatttaaagaagtctggaagatggcgttcggatagcgat
agaactggggatttcaccaacagctccactagccaatataggagacattctgggtcgacg
agtgggcttggtggctattcacctagaaagagaagaactgaatctgctatcaagacccct
tcacctgttcgatcacccgagaagaaaaatgaagccttggatcttcttccagcagacaaa
gttggattattttctggttcggttacttccatttttcagccgtcaaatcctactgtctcc
tccgtcatcagtactgatcaatccagtggtgcacttttttcttcagctatgggaaaatct
ttgtcaggcgtttcttcaaataatctaccaatgaagacagcaaatgtttctcttgattta
attcagctaacacaagctacccgaccaatgaggaggctttatattgaaaatgtaccacat
tctgcatcagagaaagcagtcattgagtgcatgaatggttttcttacatcctcaggtgtt
aatcacatcgaaggaacccagccatgtattagttgcattatacacaaagatcgggggcaa
gctcttgtagaatttcttacgcctgaggatgcttcagcagcactttcatttgatggaact
aacttctctggctccattctaaagatccggcgaccaaaagattatgttgagattgtaact
ggtgacctggacaagtcagaggcggtagtaaatgaaatcagtgatgttgtcgaggattca
ccaaataagattttcattgctgggatctcaaatagaatatcttctgaaatgcttagggat
attgttacttcctttggacctttgaaggcctatcactttgagatcaacggggatcttaat
gaaccgtgtgcctttttggagtatgttgaccaatcggttatgcctaaagcctgtgctggt
ctaaatggtatgaagattggaggggaagtactaaaagttttttcagccgttccttttgcg
ccattggaacgtaatggatgtcagccatgttatgggatcccagagcatgtaaaacctctt
cttcaacagccaacagtagtgttaaaacttaataatgtgttcggtgcagatgttctacct
gtactctctgagtcaaatattgacgaagttcttgaagatattcggtttgaatgtgccagg
tttgggactgttaaatccatgaatgttgtaaagccatgcaatagctttgtcggtgctgaa
gaaaaatacaagaacactaatgatgtggagatcaaacatgggattcagggaaacagcaca
ttagtgccttcaagaaacgataatgatcttgaagatgatgaagctaaccttaatgatcgc
cccaatgaagttgtggagaacaaattgtgtcaaatgggcaatgatgatgctccgtgtttt
gaagacgtagcttgtgagaatacattggagagcatccctggaggaatccctggacggcag
agcagcccaggaaatgaacttcgtgacacaaacgtagctgaaatggttgaaactgatgaa
aagggctcagataacaaatcaatgcttctagatgattcaactacagtgggggctgatagt
aagaagaaagttttaaatggattggatgccatggtgagaacggattctgatgcatttgag
aaggttgaaaagaaggatcctaggacaaatttatttgtgttggggagtgtttttgttgag
tttggtagaatggaagcctcgtgtatggctgcacactctttacatggaaggatttatgat
gggcaagagatttgcatcgagtacattcctcacgatctctatcgtaagaggtttcctaaa
taa

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