KEGG   Momordica charantia (bitter melon): 111009994
Entry
111009994         CDS       T05045                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
mcha  Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mcha04812]
    111009994
Cytoskeleton proteins [BR:mcha04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     111009994
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SPT8 WDR90_beta-prop_4th eIF2A Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_RIG_1st Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_WDR19_1st PROPPIN VPS8_N LDB19
Other DBs
NCBI-GeneID: 111009994
NCBI-ProteinID: XP_022138937
UniProt: A0A6J1CAW9
LinkDB
Position
Unknown
AA seq 841 aa
MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR
TEPYAVNNVNRVNGRSEPKSSSNLPLQNENNAKAGFGGLSVSQTSDPLLKETKTLGRLSV
SQNSDVVKDPKPLSSAGNGPSTPQRISLNAGPKTNLVSSVTAPSVVVPKRNSVKGSSTFN
NPIFNKSDVIPVIVPRSNSRHEQDDSRKEFDVAGRVVPVPRSNSRHEQDDSRKEFDVAGR
AVTVPRSSSRHEQDDSRKDFDVAGRAVPVPLLSKAADSRRFPNGRDEVDNSTISVLSESR
GLKAADMGTIVDRNSLHGIGSQKIAKDERYIGSGKNETETKETTASFKHEDESRGHKTSR
DTSFTDTTKGGRMRSHVVDWDKRERSSSHYSRLTYNASPGRAAALDNLPLSNGRSYHRSP
EKETIAPATDEDTIANVLEQHNQFVSSMQSRSAKLQAVYRYWERNDIKGAVSAMEKMADH
AVAADVIGILTEKIEVVTLDICSVILPLLSGLLESDMDRFIDISMEMVVKLVRTFGSVIY
STISATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALMRKRGSVAKSAQELNLALQEF
Q
NT seq 2526 nt   +upstreamnt  +downstreamnt
atgactaccaaacgggcgtacaagctgcaagagtttgtggcacattcttccgcggtcaat
tgcctgaagattggaaggaagtcatcccgtgttcttgtcacagggggtgaagatttcaag
gtcaatctctgggctattggtaaacccaatgccatactgagtttgactggccatacaagc
ggaatagattctgtaagctttgactcatcagaagtgttggtagctgcaggggctgctagt
ggcacaatcaagctttgggatttggaggaggctaaaattgttcgaacacttactggtcat
agatccaattgcatttctgtggattttcaccccttcggagaattctttgcctctggatca
ttggatacaaatcttaaaatatgggatataaggaagaaagggtgtatccacacatacaaa
ggtcacactcgaggggtcaatgcaatcagatttactccagatggtcgttgggttgtatct
ggtggagaagacaacacggtgaagctctgggatctaactgctggaaagttgttgcatgat
ttcaagtgccacgagggtcaggttcagtgtatagattttcaccctcatgagtttttgctg
gcaacaggttctgcagacaaaactgttaaattttgggaccttgaaacctttgagttgatt
ggttcagctggaccagagaccagtggagtccgttgtttgacttttaatcctgatgggagg
acactactttgtggattgcatgaaagtttgaaggttttctcatgggaaccgataagatgt
catgatggtgtggaagtcggttggtctaggctgtctgatcttaatgttcatgagggaaaa
cttcttggctgttcatacaatcagagctgtgttggagtgtgggttgtagacatcacgcgc
acagagccctatgcagttaataatgttaacagagtaaatggtcgctcagaacctaaatcc
agcagtaatctaccattgcaaaatgagaacaatgccaaggctggttttggtggattgtca
gtatcacaaacttctgatccgttattgaaggaaaccaaaacattaggaaggttgtcagtt
tctcaaaattcagatgttgtcaaggatccaaaacctttgtcgtccgcaggaaatggacca
agtactccccaaaggatcagtttgaatgctggcccaaagactaacttggtcagctcagtt
acagcacctagtgtagtggtaccgaagagaaactctgtaaagggttcttcaacattcaac
aacccaatcttcaataaatcagatgtcatacccgttattgtacccaggtcaaattcaagg
catgagcaggatgattctagaaaggaattcgatgttgctggaagagtagtgccagtaccc
aggtcaaattcaaggcatgagcaggatgattctagaaaggaattcgatgttgctggaaga
gcagtgacagtacccaggtcaagttcaaggcatgagcaggatgattctagaaaggatttc
gatgttgctggaagagcagttccagtaccattgctatcaaaagctgctgatagtaggagg
tttccaaatggtagagatgaagttgataattcaactatctccgttctttctgaatccaga
ggtttgaaagctgctgatatgggcaccattgtagataggaattccttgcatggtatcggt
tcacagaaaattgcgaaagatgaaaggtatattggatctggcaagaatgaaacggaaaca
aaagagacaacagcaagcttcaagcatgaagatgaatctcgagggcataaaacaagcaga
gacacatcttttaccgatactacaaaaggagggaggatgcgttcacatgttgttgattgg
gacaaaagagaaagatcatcttctcattatagccggctaacatataatgcctctcctgga
agagcagctgcacttgacaatcttccattaagtaacgggagaagttatcatcgatctcca
gagaaagagacgatagcacctgcaaccgatgaggataccatagcaaacgtactagaacaa
cacaatcaatttgtcagctcgatgcaatctcgttcagcaaaattgcaagcggtctataga
tattgggagaggaatgatattaaaggggcagtgtctgcgatggagaaaatggctgatcac
gcggttgctgctgatgtaattggtattttgacggagaaaattgaagttgtcacactggat
atctgcagtgtcatcttgccacttctttctggtctccttgaaagtgacatggacaggttt
atagacatctccatggagatggttgtgaagctggtgaggacgttcggttcggtgatctat
tcaacaatatcagcaacatcatccgttggtgtaaatattgaggcagagcagaggttggag
cgatgcaatctctgcttcatcgagcttgaaaaagtcaagcgctgcctccccgcccttatg
agaaaaaggggatcggtagcgaagtccgcgcaggagttgaatctcgcgttgcaggaattc
caatga

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