Momordica charantia (bitter melon): 111010040
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Entry
111010040 CDS
T05045
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111010040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111010040
03041 Spliceosome [BR:
mcha03041
]
111010040
03036 Chromosome and associated proteins [BR:
mcha03036
]
111010040
Transcription machinery [BR:
mcha03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111010040
Spliceosome [BR:
mcha03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
111010040
Complex B
111010040
Complex C
U2 SnRNP specific factors
111010040
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
111010040
TFTC complex
111010040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
111010040
NCBI-ProteinID:
XP_022138999
UniProt:
A0A6J1CBN6
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MYLYSLTLQRATGIVSAINGNFSGGKTQEIVVARGKVLDLIRPDDSGKIQTLLSVEIFGA
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKDKNVFDKIHQETFGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGVDCGFDNPI
FAAIELDYSEADQDSTGLAATEAQKNLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRVDLPAERGVLIVSAAMHKQKTMFFFLLQ
TEYGDIFKVTLEHNNDSVKELKIKYFDTIPVTSSMCVLKSGFLFAASEFGNHSLYQFQAI
GEDADVESSSATLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKVINLFEEETPQ
IFTLCGRGPRSSLRILRPGLAISEMAVSELPGVPSAVWTVKKNINDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLSVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSAPESLLFLEVLASVGGEDGADHPASLFL
NAALHSGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSVILRGRRAILCLSSRPWLGYIH
QGHFLLTPLSYETLEYASSFSSDQCAEGVVAVAGNFLRVFTIERLGETLNETVIPLRYTP
RKFVLQPRRKLLVVIESDQGAFTAEEREAARKECFEAAGAGENGAMEQMENGGDDEDKDD
PLSDEHYGYPKSEAEKWVSCIRVLDPRSATTTCLLELQDNEAAFSVCTVNFHDKEYGTLL
AVGTAKGLQFFPKRSLIAGYIHIYRFLEDGKSLELLHKTQVEGVPLALAQFQGRLLAGIG
SVLRLYDLGKRRLLRKCENKLFPNTIVSIQTYRDRIYVGDIQESFHYCKYRRDENQLYIF
ADDSVPRWLTASYHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNG
APNKVEEIIQFHIGDVVTSLQKASLIPGGGECILYGTVMGSLGALHAFTSRDDVDFFSHL
EMHMRQEHPPLCGRDHMGYRSAYFPVKDVIDGDLCEQFPTLPLDMQRKIADELDRTPGEI
LKKLEEVRNKII
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttacagcctcactttgcaacgagctaccgggattgtctctgctataaatgga
aatttctccggtgggaagacgcaggagatagtcgtggccagagggaaggtcctggatctt
attcgtcccgatgatagtggtaagatccaaactcttctttcggttgaaatctttggtgcg
attcggtctttagctcaattcaggcttactgggtctcagaaagattatatcgttgttggg
tccgattcgggtcggattgttattctcgagtataataaggataaaaatgtgtttgacaag
atacaccaggagacttttgggaagtctggttgtcgccggatagttccgggccagtatttg
gctattgatcccaaaggaagggctgttatgattggggcttgtgagaagcagaagcttgtt
tacgtgttgaacagggacacggcagcgaggctaactatttcgtcgccgcttgaggctcac
aaatcacatacgattgtctattcaatttgtggagttgattgtggatttgacaatcctata
tttgctgcaattgagttggattactcggaggcagatcaggattctactgggttggcggca
accgaggcccagaagaatttgaccttttatgaacttgatcttggtctcaatcatgtctct
aggaagtggtcggaacctgttgataatggtgctaatatgcttgttactgttccggggggt
ggggatggccccagtggagtgttggtttgtgctgaaaactttgtcatttataagaatcag
gggcatccggatgtgagagctgtgattcctaggcgtgtggatttacctgctgaacgtggt
gtgcttatagtttcagcagctatgcataagcaaaagacgatgtttttctttcttttacag
acagaatatggagatatttttaaggttactttggaacataacaatgacagcgtcaaagaa
ctgaagatcaagtattttgatacaattccagttacatcttcaatgtgtgtattgaaatca
ggatttctatttgctgcttcagaatttggaaatcactcactataccagttccaagctata
ggggaagatgctgacgttgagtcttcctcggctactctgatggaaactgaagaaggtttt
cagcccgtctttttccagcctaggaggcttaagaaccttgttaggattgatcaagttgag
agcttaatgcctataatggacatgaaagtcataaatctttttgaggaagaaacaccacag
atatttactctctgtgggcgtggtcctcgatcatctctgcgaatattgagacctggtttg
gccatcagtgaaatggctgtgtcagaacttcctggtgttcctagtgctgtttggactgtg
aaaaagaacatcaatgatgagtttgacgcatacattgttgtgtcatttgccaatgcaacg
cttgttctttctattggtgagacagttgaagaagttagtgatagtgggtttcttgacact
acaccttccctttctgtttctttgataggtgatgattcacttatgcaagtccatccaaat
ggcattaggcatattagggaagatgggcgtattaatgagtggagaactcctggtaaaagg
accattgttaaggttggttctaataggcttcaagtggtgattgccttgagtgggggagaa
cttatttatttcgaggtggacatgactggtcagctaatggaggtggagaagcatgaaatg
tctggagatgtggcttgcttggacattgccccagtacctgaagggagacaacgttcccgt
ttcctagcagttggttcttatgacaacactatacgaattctatcattggatcctgatgac
tgtatgcagattttaagtgtgcagagtgtttcttcagctccagaatctctcctatttctt
gaagttctggcatcagtaggtggggaggatggtgcagatcatcctgctagccttttccta
aatgctgcattgcactctggggttttgttcagaacagtagtggatatggtgacaggtcaa
ctttctgattctcgatcccggttcttaggattaagagcacccaaactattttctgtaatt
ttgagggggaggcgtgcaattctttgcctctcaagtagaccttggcttggttatattcat
caagggcattttctattgacaccactatcatatgaaactcttgaatatgcaagctcattt
tcatcggatcagtgtgcggaaggtgttgttgctgtagctggaaatttcttgagggttttt
accattgagagattgggagaaacattaaatgaaacagttattccacttaggtacactcca
aggaagtttgtgcttcaacctaggagaaaactactggttgttatcgagagtgatcaagga
gcattcacagcagaagagcgagaagccgctagaaaggagtgctttgaggctgcaggggct
ggggaaaatggcgcaatggagcaaatggagaatggtggagatgatgaggataaggatgat
cctttatctgatgagcattacggttacccgaagtcagaggctgaaaaatgggtttcttgc
atccgagttcttgaccctaggtcagccactacaacttgtctgctggagcttcaggacaat
gaagctgcattcagtgtttgcactgtgaatttccacgacaaggaatatggaaccctttta
gctgttggtactgctaaggggctgcagtttttccccaaaaggagtttaattgctggatat
attcatatttatcgttttctagaggacggaaaatcccttgagcttttgcacaagacacaa
gttgaaggtgttcctctcgctttagctcagttccaggggagattacttgcgggaatagga
tctgttctcagactgtatgatttgggtaaaagaagattgcttcgaaaatgtgaaaataag
ttgttcccgaatacaattgtgtctattcagacatatcgtgatcggatttatgttggtgac
attcaggagtcattccattattgcaagtatagacgggatgagaatcaactatacatattt
gctgatgattctgttcctagatggcttacagcatcatatcatgtagattttgacacaatg
gcaggtgctgacaagtttggaaatatctattttgtgcggctaccacaagatgtctcagat
gagattgaagaagatccaacaggtggaaagataaaatgggagcaggggaagcttaatggg
gctcctaacaaagttgaggagatcatacagtttcatatcggtgatgtggtcacatcattg
caaaaggcatccttgattccaggaggtggagaatgcattttgtacggtacagtgatggga
agcttgggagcattgcatgctttcacctcccgtgatgatgttgatttcttttctcacttg
gagatgcacatgagacaggaacatccacctttgtgtggaagagatcatatgggttataga
tcagcttattttcctgttaaggatgtgattgatggggatctgtgtgagcagttcccgacc
cttcccctagatatgcagagaaagattgcagacgaattggatcgaactcccggtgagata
ctgaagaaacttgaagaagtacgaaataagattatttga
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integrated database retrieval system
