Momordica charantia (bitter melon): 111010455
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Entry
111010455 CDS
T05045
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03015
mRNA surveillance pathway
mcha03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111010455
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111010455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111010455
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
111010455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
ECM10
Motif
Other DBs
NCBI-GeneID:
111010455
NCBI-ProteinID:
XP_022139595
UniProt:
A0A6J1CCR1
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Position
Unknown
AA seq
707 aa
AA seq
DB search
MDEGEGGFGEGVDQIDQFHRNEAISAVADEGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
DDLGFRNEEEPPKIEPPATLAPSSGASIPGVGGGATEVASLGDGGHSVPERVTEGYNQIP
DLRTNEMAMRGGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAVHQAPQQPQPQPQ
QQQQQQQPQQHHHQPLHSGVLGNPGSVENDGLLRQGGVNVNGVGGNGYGNMGSAGGGGGG
TILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDPSAATACKE
GMNGHVFNGRPCVVAFASPFSVKKMGEAQVNRNQQIAQAANPQARRGPNDAVGKIGGSNI
QTGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRGIMGNGGNGFGQG
IGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPG
VAPHVNPAFFGRGMPMNGMGMMAPSGVDGPNMGMWSDPSMGGWGSEEHGGGRAGESSYGE
EAGSDQQYGEGSHDRGGWANSAKEKDRGSERDWSQSSDRRYRDDRERSKEKDPGPDHDWQ
DRRPRDDRDVGRERDKDRDRDRELSRDYERGHDRDRDRDRDRDRHKEDRDRYSDHHRYRD
REPEHEDEWERGRSSRTHSKSRLPQEEESRSRSRDADYGKRRRLTSD
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggtgagggagggttcggtgagggtgtggatcagattgatcagtttcatagg
aatgaggcgatttctgccgttgctgatgagggtttcttgggcgaagatgaggatgagtat
gaggacctctacaacgatgttaatgttggggaggggtttcttcagtcgttgaggaagaat
gatgatttgggattcaggaacgaggaggagccgccgaagattgagcctcctgcaacttta
gcacccagttctggtgcttcgatacctggtgttggcggaggtgcgactgaagttgctagt
ttaggagatggcgggcacagtgttccggagagagtaaccgagggttacaatcagattcca
gatttaagaacgaatgagatggctatgagaggtggggcaggatcggggccgccgatgggt
gggggaggcgggattagggttgaattagggcaagggagtaaaaccaatgagttggaggag
cgaagtagtaataacgtagccgtgcatcaggctccgcaacagccacagccacagccacag
caacagcaacagcaacagcaaccgcaacagcaccaccatcaaccactgcacagcggagtt
ttaggaaatcccgggagcgtagaaaatgacggtttgctaaggcaaggtggagtaaatgta
aatggggttggtggaaatgggtatggtaatatggggagtgcagggggaggtggcggtgga
acgattttgtttgttggtgatttacattggtggactacagatgcggagctggaggtggag
ctctgtaagtatggtcctttaaaggaggttaaattttttgacgagaaagctagtgggaaa
tcaaaaggctactgccaggttgagttttatgatccttctgctgccacggcttgtaaggag
gggatgaatgggcatgtttttaatggccggccatgcgttgttgcctttgcatcaccattt
agcgttaagaagatgggagaagcccaagtaaataggaaccaacagattgcccaagctgct
aatcctcaagcaaggagaggtcctaatgatgccgtaggtaaaattggtggaagtaacatt
caaacgggtggtaattaccaaggtggtgataacaacagaggttctgggagaggtaattgg
gggagaggcaatgcccatggaatgggaggtagaggaccagctggcccgatgaggaatagg
ggtggtgggatgggtggcagaggtataatggggaatggtggaaatggatttggccaagga
attggtgccacccctcctttgttgcatcctcagtcgatgatgggtcaaggttttgatcca
tcttttggtgcacccatgggacgaatgggcacctatggtggttttcctggagctcccgct
ccccctttctctgggattttatcgtcatttccacctgttgggggtgttggtcttcctgga
gtagctcctcatgtgaacccagcattttttggaagaggtatgcctatgaatggaatgggg
atgatggcaccatcgggtgttgatgggcctaatatgggaatgtggtccgaccctagtatg
ggtggatggggcagtgaagaacatggtggtggtagagctggagagtctagttatggagaa
gaggctgggtctgaccaacaatatggtgaaggtagtcatgatagaggtgggtgggcaaat
tctgctaaggagaaagatagaggctccgaaagggattggtcacagtcttctgatagaagg
tatcgagacgatagagagagatccaaagaaaaagatccaggtcctgaccatgattggcag
gatagaaggccacgcgatgatagagatgtaggtcgagaaagggataaggatcgtgatcgc
gatagggaactttctcgagattatgagcgtggccatgatcgcgatcgtgatagagatcgt
gaccgtgataggcacaaggaagatagggacaggtattcagatcatcataggtacagggac
cgtgaaccagagcatgaagatgagtgggaaagggggcgatcatcgaggactcatagcaag
tctagattaccacaagaagaagaaagtcgttctagatcaagggatgctgattatgggaaa
agacggcggcttacttctgattag
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