Momordica charantia (bitter melon): 111010551
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Entry
111010551 CDS
T05045
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111010551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111010551
03016 Transfer RNA biogenesis [BR:
mcha03016
]
111010551
Enzymes [BR:
mcha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
111010551
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
111010551
Transfer RNA biogenesis [BR:
mcha03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
111010551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
PAP_NTPase
TUTase
Nrap_D2
Polbeta
DNA_pol_B_palm
Motif
Other DBs
NCBI-GeneID:
111010551
NCBI-ProteinID:
XP_022139704
UniProt:
A0A6J1CDS2
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MEEETIQQFLYDTLSPLSLTAATTTSSEDQLSPSGDLEPYSVFRNQISLSTSHCAPVETA
APEFFSLDVGADNVEEISGFSTPLPGASVLETEPRTPEPEDQAKLESGWFRGNSRFKSPM
LQLHKEIVDFCEFLSPTGEERDERDKAVERVFSVVKHIWPHCKVEVFGSFQTGLYLPTSD
IDVVILGSGIPKPQLGLQALSRALSQKGIAKKIQVIGKARVPIIKFVEKQSGIAFDISFD
VQNGPKAADYIKVAVDKWPPLRPLCLILKVFLQQRELNEVYSGGLGSYALLTMLMAMLQS
HNSCQSSLEHNLGVLLVNFFDFYGRKLNTSDVGVSCNGGGIFFSKSKRGFMTKARPFLLS
IEDPQAPDNDIGKNSFNYFQIRSAFALAFSTLTNVKTILGLGPNRSILGTIIRPDPVLLK
RKGGTDGEVTFNSLLPGAGEPIQLQYGNEQEMLCNWQFGDDEEPLPRGNDASEDFGTPSS
RKKRKVSCREKSKKKERENSSSKRRHEENGYSKEKSSKKKRWRQNGSDANGFSHSGRRSP
WKH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagacaattcagcagtttctttacgatactctaagcccactttccttaacc
gccgccactaccacttcaagcgaggaccaactgtcgccgtccggcgatctcgagccatac
tccgttttccggaaccagatttctctctctacttctcactgtgctccggtcgagaccgct
gcgcccgagtttttctccctcgatgttggtgctgacaatgtggaggaaatttcgggtttt
tctactcctttgccgggtgcgtcggttctggaaactgagcctaggacgccggaacctgag
gaccaggcgaagcttgaaagtgggtggttccgtggcaatagtagattcaagagccctatg
ctacagttgcataaagaaattgtcgatttttgtgaatttctgtctccaactggagaagaa
cgcgatgaacgtgacaaggcagtagaaagggtctttagtgttgtcaaacatatatggcct
cactgcaaggttgaagtatttggatcgttccagacaggactctatcttccaaccagtgac
attgatgttgttattctgggttcaggcatccctaaaccacaacttggtttgcaagctctt
tccagggccttatcacaaaagggaatagcaaaaaagattcaggttattggaaaagcccgt
gtgccaataattaagtttgtcgaaaagcaaagtggtatagcttttgatattagttttgac
gtgcagaatggaccaaaggctgcggattatataaaggttgcagttgataagtggcctcct
ttgcgtcctttgtgtttgatcttaaaggtgtttttgcagcagagagaactgaatgaggta
tattcaggtggactgggttcttatgcacttcttaccatgcttatggcaatgttgcagagt
cacaacagctgccaatcttctcttgaacataatcttggagtccttttggtaaattttttt
gatttctatggtcgcaaattgaacacttctgatgttggtgtatcttgcaatggaggaggc
atttttttctcgaagagtaaaagaggattcatgacaaaagcacgtccatttcttctttcc
attgaggatcctcaggcaccagataatgacattggcaagaattccttcaattacttccag
ataagatctgcatttgcactggccttttcaaccttgacaaatgttaagaccattttgggt
ctgggtccgaacaggagtattcttggcacgataattaggcctgatccagtcctgttgaag
cgaaaaggtggcacagatggagaagtgaccttcaattctctactgcctggagcaggggaa
cctatacaactacagtatggaaatgagcaagagatgctgtgtaattggcagtttggtgat
gacgaagaaccattgccgcgggggaatgatgcatccgaagattttggtacgccttcctct
aggaaaaagagaaaagtcagttgtcgcgagaagtcgaaaaagaaggaaagagaaaatagt
agtagtaagcgaaggcatgaagaaaatggatatagtaaagagaagagttcaaagaagaaa
cgatggagacagaatggcagtgatgccaatggttttagccattctggaagaaggtcccct
tggaaacactga
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