Momordica charantia (bitter melon): 111010804
Help
Entry
111010804 CDS
T05045
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111010804
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111010804
Spliceosome [BR:
mcha03041
]
Complex C
Other components
Complex C specific factors
111010804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
AAA_22
HA2_N
DEAD
AAA_19
AAA_30
AAA_7
nSTAND3
SRP54
T2SSE
AAA_11
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
111010804
NCBI-ProteinID:
XP_022140054
UniProt:
A0A6J1CE11
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MAQFWKPGTEKPRLLDDGEGGVLFFSSSYSSSSGFGFSSIEKQRQRLPVYKYRTAILYLV
ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGVK
LGEEVGYTIRFEDLTNTDVTRVKFLTDGVLLREMMDDPLLTKYSVIMVDEAXERSISTDM
LLGLLKKIQRRRPDLRLIISSATIEAKSMSTFFQPSKRRHRFEGEALEPKVEPAILSVEG
RGFNVQIFYLEEPVSNYVQSTVSTVLSIHEQEPPGDILVFLTGQGDIDSAIQLLREEERN
DRKKSELIVLPLYSGLSRAEQELVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFS
KQRFYNPISDIESLIIAPISKASARQRTGRAGRIRPGKCYRLYTEEYFINDMPAEGIPEM
QRSNLVSSVIQLKALGIDNILGFDWPSPPSPEVMVRALEVLYSLGVLDDDAKLTSPVGFQ
VAEIPLEPMISKMILASGELGCSEEIITIAAVLSIQSIWTSSRGAQKELDEARLRFAAAE
GDHVTFLNVYKGFLQSNKSSQWCHKNFINYQAMKKVIEVREQLRRIAQRLGIVLKSCERD
TMAVRKAVTAGFFANASHLEAYSHNGMYKTTRGSQEVYIHPSSVLFRVNPKWVIYHSLVS
TDRQYMRNVITIDPGWLTEAAPHFYQYRQLSHMPH
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattttggaaaccgggcactgagaagccccgcttgctcgacgatggagagggt
ggcgtgcttttcttctcttcttcttactcttcttcatcgggatttgggttctcgagcatt
gagaagcagaggcagaggcttcctgtttataagtatcgcaccgccattctgtatttggtg
gaaactcatgccactactatcattgttggcgagacgggtagcggcaaaactactcaaatt
cctcagtacctcaaagaagcaggttgggctgatggtggccgcgtaattgcctgcacccaa
ccaagacgactggctgttcaggcagttgcttctagggtggctgaagagatgggtgtaaag
cttggagaggaagttggttatacgatccgatttgaagatcttacaaacacagatgtaaca
agggtaaagtttcttacagatggtgtgttactcagagaaatgatggatgatcctcttttg
accaagtatagtgtaataatggtggatgaggcccrtgaaaggtctatctcaactgacatg
ttacttggtctcttgaaaaagattcaacggcggcgacctgatctgcgattgattatctct
tctgctacgattgaggctaaatctatgtcaactttcttccaacccagcaaaaggcgtcac
agatttgaaggtgaggcacttgaaccaaaggtggaacctgccatcctctcagttgaggga
agagggtttaatgtacaaatcttctacctcgaggagcctgtttcaaactatgtccagtct
actgtttcaactgtattgtcaattcatgaacaggaacctccaggtgatatacttgtattt
ctcactggccaaggtgatattgattctgctattcaattgcttagagaagaagagcgaaat
gatcgaaaaaaatcagaattgatcgtcttgcctctgtactctgggctttcacgtgcagag
caggagcttgtgttctcacccacacccagggggaagaggaaagtagtgatttcaacaaat
atagcagagacatcattaactctcgagggcattgtctatgttgttgacagtgggttctct
aagcagcggttttacaatccaatatcagatattgaaagccttattattgcaccaatatct
aaggcctcagctagacaaaggactggtagggctggaagaattcgacctgggaagtgttac
agactgtatacagaagagtatttcatcaatgacatgcctgctgagggtattcctgaaatg
caaagatcaaatcttgtttccagcgtcattcagttgaaagccttagggattgacaatatt
ctaggctttgattggccatcacctccatctcctgaagtaatggttcgggcactagaagtt
ctttattcacttggagtcttggatgatgatgcaaagcttacttctccagttgggtttcaa
gttgcagagattccacttgagccaatgatctcaaaaatgatcttagcttctggtgagctt
gggtgctcagaggagatcattacgattgctgctgtactgtcaatccagtccatttggact
tctagtaggggagcacaaaaggagcttgatgaagcaaggttgcgatttgctgcagctgag
ggtgaccatgtgacctttcttaacgtgtacaaaggatttcttcaatctaataaatcttca
cagtggtgtcataagaactttatcaattatcaagctatgaaaaaagttatcgaagttaga
gaacaactcagaagaatagctcagagattaggcatcgtcttgaaatcatgtgaaagagat
accatggctgtacgcaaagcggttactgctggattttttgctaatgcttctcatttagag
gcatacagtcacaatggaatgtacaagactaccagaggctctcaagaagtttatatccat
ccctcttcagtgctattcagagttaatccaaagtgggtcatatatcattcgctcgtgtcg
accgatcgacaatatatgcgtaatgtcatcaccatagatcccggatggttaacggaggcc
gctccccatttttaccagtacaggcagctcagccatatgcctcactga
DBGET
integrated database retrieval system
