KEGG   Momordica charantia (bitter melon): 111010856
Entry
111010856         CDS       T05045                                 
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
  KO
K14793  ribosomal RNA-processing protein 9
Organism
mcha  Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mcha03009]
    111010856
Ribosome biogenesis [BR:mcha03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    111010856
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML_2 Beta-prop_EML WDR55 EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_2nd PAC11 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_SPT8 ASA1 ANAPC4_WD40 CFAP251_N Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_NOL10_N Beta-prop_Aladin Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_ACSF4 SMC_ScpA
Other DBs
NCBI-GeneID: 111010856
NCBI-ProteinID: XP_022140121
UniProt: A0A6J1CEV4
LinkDB
Position
Unknown
AA seq 519 aa
MKKITKKNSSAPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDNDEIESGESDEDNGFMGS
DAERGKYEGAEDEQFEEETADEKRKRVAKEYLEKIREIARREKQREDEEKDEDESGGEGE
RDSLVAQILQQEQLEDSGRVRREIASRVQKPEARDEFQILIKHRQSVTAVALSDDDLKGF
SSSKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATKHSKVILSLAVSSDGRYL
ASGGLDRHVHIWDTRTREHVQAFPGHRGPVSCLKFRQGTSELFSGSYDRTVKIWNVEDRA
YINTLFGHQSDVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISN
DEFLSGSDDGSIELWTVLKKKPVHIVRNAHPLSFSCTNLELKDNGAIPNGCMGNGGVNSN
TSHSLSAYSWVSSVSVCTNSDLAASGAGNGSVRLWATASDKKDIRPLYDLPLVGFVNSLT
FAKSGRFLVAGVGQEPRLGRWGRIPAARNGVAVHPLKLS
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgaagaagatcacgaagaagaacagctctgctcctaagggggcgaaaaaagggaagaat
tttccgctcagtaaggacccttttttcagttctgaatcgaggaaacggaggaagattgtg
gatgataatgatgaaattgagagtggtgagtcggacgaggataatgggttcatgggctct
gatgcggagagggggaaatatgaaggtgctgaggatgagcagtttgaggaagaaactgcc
gacgagaagaggaagagagtggcaaaagagtacttggagaaaattcgggaaattgctagg
agagaaaaacagagggaggatgaagagaaagatgaggacgaaagtggtggggaaggcgaa
agagattcacttgttgcacagattcttcagcaagagcaacttgaagatagcggaagggtt
cggagagaaatcgcatcgagggttcagaagccagaagctagagatgaatttcaaatcttg
atcaagcacagacagagtgttacagctgtggctctatccgatgatgatttgaaggggttt
tcatcgtctaaggatggtaccatcttacattgggatgtagatagtgggaaaggggaaaaa
taccaatggcctagtgatgaagtattgagattgcatggtgctaaggacccacaaggtcgg
gctacaaagcatagtaaagtcattttgtcactggcagttagttctgatggtcgatatttg
gcaagtggaggcttagaccgccatgtgcatatatgggatactcgtacaagagagcatgtt
caggcatttcctggtcatagaggacctgtttcttgtttgaaattcaggcaagggacctca
gaactcttttctggttcatatgatagaactgtcaagatatggaatgtagaggacagagct
tatataaatacactctttggtcaccaaagtgatgtgttgactattgattgcctccggaaa
gaaagactgcttactgttggacgtgaccggagtatgcaattatggaaggttccagaggag
tcccgtttagtatttcgtgcacctgcatcatccttggaatgttgctgtttcattagtaat
gatgagttcttatctggatcagatgacggcagtattgagctctggactgtattgaaaaag
aagcctgttcatattgtacggaatgctcaccctctttcattttcttgcacgaatttggag
ctaaaggataatggagccatccccaatggttgtatgggaaatgggggtgtcaattctaat
acttctcatagtttgtcagcatactcttgggtaagttcagtctcagtatgtacaaacagt
gatcttgctgcatcgggtgctggaaacggttccgttcgtttatgggctaccgcaagtgat
aaaaaagatattcgacctttatatgaccttcctctggttgggtttgtgaactccttgact
tttgccaaatctggaaggtttctggtagctggagttgggcaggaacctcgtctaggaagg
tgggggcgaatcccggctgctcgaaatggagttgcagttcatccccttaaactctcatga

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