Momordica charantia (bitter melon): 111011480
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Entry
111011480 CDS
T05045
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111011480
Transcription machinery [BR:
mcha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
111011480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
111011480
NCBI-ProteinID:
XP_022140941
UniProt:
A0A6J1CHI4
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MGVVTVSSSAARTPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLPVESN
NRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKD
GRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKN
EADEIDDLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKE
LGREPTEGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF
QDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE
IQRAKLELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGI
TDVEGAGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS
REMVRKHEVKALMKLKHPARVDYLRRYLI
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttcgagctcggcagcacgaactcctcttcggctgggcgcaaaa
ttttccaatcacaattctacattgaaaagaccaacgattgtggcatttaaagcagataag
cacactaacactactttggtctcaccccacgagcaagtaaccctacctgtggagagtaat
aacagaaccaagaaaagatcaggaaaaactagcaagtctttgaagagagttaaagctgtc
tttaccgatgaagcttctccctgtacttcggaagtggattacaatgaggcagctgccaaa
cttgaaaatatattcaatcttagccctatgacagatgatactgatgtggaaagtaaagat
ggcaggttgagaagcggtcagcagaggaggaagaaatcagacaagagatcaggtgatggc
attatcaggaaccagactaagaggattaagcgactagatctcgacaagaggatagcattg
aaaaataacaaggaagataaagcagctccttcattaaagaaacaaaaggagaccaaaaac
gaggctgatgagattgatgatcttgttagagactactctgcttcaactgacttggttagt
ttagactggaaaaaaatgaagattcctccagttcttccttcatcggagcatacccgtttg
ttcaaattggttcaacccatgaaggctcttattcaagtacaagaagatctgcagaaagaa
ttgggcagagaaccaactgaaggtgaactggcgaatgcgacaaatatgaatgtggttcaa
gtaaggagacaattggaggttggtcgtgctgccagaaacaagctcatcaagcataacctt
cgccttgtattgttcgtgatcaataaatactttgaagattttgcaagtggcccgaaattt
caagacctttgtcaagcaggagtcaagggactcattacagcaattgatcgctttgagcca
aagaggagattccgactgtcaacctatgctttattctggataaggcatgctattattcgg
tcaatgactctctcaagcttcacacgcgtctcatttggacttgactcggtaagagttgaa
atccaaagagctaaacttgagttattatttgagcttcatagattaccaacagaggaagag
atagttgcaaaagttggcatctcacctgagaggtatcttgaagtaatgagggctacgaaa
cctgtttactctctccactctaggcatgcaactacatcagaagagtttatcaatgggatc
actgatgtagaaggtgctggaggtgacaaccggaggcaaccagctcttctgaggcttgct
cttgacgatgtgcttgattctcttaagcctaaggagagcttggtgatcagacaaagatat
ggtctcgatggcaaaggaaaccgaacattaggtgagatagccggaaatttaaatatttca
agagaaatggttcgaaagcatgaagtcaaagctctcatgaagctgaagcatcctgcaaga
gtggattatcttcgtcggtacttaatctga
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