Momordica charantia (bitter melon): 111011666
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Entry
111011666 CDS
T05045
Name
(RefSeq) pre-mRNA-processing protein 40A
KO
K12821
pre-mRNA-processing factor 40
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111011666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111011666
Spliceosome [BR:
mcha03041
]
Complex A
U1 snRNP components
U1 related factors
111011666
Complex B
111011666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
111011666
NCBI-ProteinID:
XP_022141217
UniProt:
A0A6J1CJ95
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MENLSQSSGGQFRPIIPAQPGQTFISSAAQQFQLAGQNISSSNVGVPTGQVQPHQYHQSM
QQLVSRPSHPSYVTPSSQPIQMPYAQTRPLTSVPPQSHQSVAAPNNHMHGMGAHGLPLSS
PYTFQPMSQVHAPVGVGNSQPWLSSVNQTTNLVSPVEQANQHSSVSAINPAANVPVFNQQ
SSSDWQEHASADGRRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTAPDGRKYYYN
KVTKESKWTMPEELKLAREQAQKEAVHGTQTDIAVTTPQPPPAVGLSHAETPAVPSINSS
ISPMVSGVASSPVPVTPFVSVSSSPSVAVSGSLAVTGTPIAATTSVTGVQSSVMTVASQS
VAASGGTGPPAVVHANASSVTGLESLASQDVKNPVDGTSSEDIEEARKGMAVAGKVNETV
LEERSADDEPLVFANKLEAKNAFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGER
KQAFHEYLGHRKKLDAEERRVRQKKAREEFTKMLEESKELASSTRWSKAVSMFENDERFK
AVERARDREDLFESYIVELERKEKEKAAEEXKKNIAEYRKFLESCDYIKVSSQWRKVQDR
LEDDERCSRLEKLDRLLIFQDYIRDLEKEEDEQKKIQKERVRRIERKNRDEFRKLMEEHI
SVGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLEELENKYHEEKAQIKD
VMKAAKITITSSWTFDDFKAAIEEGGSLTVSDINFKLVYEDLLDRAKEKEEKEAKRRQRL
ADDFSRLLQSFKEISTSSNWEDSKQLFEESEEYRSIGEESFAREVFEEYIMHLQEKAKEK
ERKREEEKAKKEKEREEKEKRKEKERKDKEREREKEKGRIKKDESDSENVDASETHGYRE
DKKREKEKDRKHRKRHHSATDDGGSGKDEREESKKSRKHSSDRKKSRKHAYSPESDSESR
HRRHKRDHRDGSRRNGGHDELEDGELGEDGEIQ
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctgtctcagtcctcaggtggacagtttcgaccgattatcccagcacagcca
ggccagacattcatttcttccgctgctcaacagtttcagttagcagggcagaatatatct
tcttcaaatgttggagtgccaactggtcaagtccagccacatcagtatcatcaatcaatg
cagcagttagtgtcaagaccaagtcatcctagctatgtaactccttcgtcccagcctata
caaatgccgtatgctcagacaaggcctcttacttctgttccacctcagtctcaccaaagt
gtggctgcaccaaataatcatatgcatggcatgggtgctcatggactacctctttcttca
ccatatactttccagccaatgtcacaagtgcatgcacccgttggagttggtaatagccaa
ccttggttgtcttctgtgaatcagactacgaacctcgtctcaccggtcgagcaagctaac
cagcattcttcagtttctgccataaatccagctgctaatgttcctgtcttcaatcagcag
tcttcatctgattggcaggagcatgcatcagctgatgggagaagatattattacaacaaa
aaaacaaaacagtccagttgggagaaaccattggaacttatgacaccacttgagagggct
gatgcatcaactgtgtggaaggaatttacagccccggatggaagaaagtattattacaat
aaggtgacgaaagaatcaaagtggaccatgccagaagaactaaagttggctcgtgagcag
gctcagaaggaagctgtccatggaacacaaacagatatagctgtgacaacacctcaacct
ccgcctgctgttggtctttcccatgctgaaacaccagcagttccttccatcaactccagc
atttctccaatggtatctggggttgcatcaagtccagttccagtcactccttttgtttct
gtatctagttctccttcggtggcggtttctggatcactggccgttactggcacacccatt
gctgcaacaacttctgtgactggagtacagtcttctgtcatgacagttgcttctcaatct
gttgctgcttctggaggtactggtcctcctgctgtggtccatgccaatgcttcgtcagtg
actggtttagaaagccttgcatctcaagatgtcaaaaatcctgttgatggaacatcttcg
gaggacattgaggaagcaagaaagggaatggcagttgcaggaaaagttaacgagactgtt
ttggaggagagatctgctgacgatgaaccgttggtatttgccaacaagctggaggccaag
aatgcatttaaagcgcttctggaatctgtaaatgtgcaatctgattggacgtgggagcag
gctatgcgagaaataatcaatgacaaaagatatggcgccttgaaaactcttggtgagcgc
aagcaagcattccatgagtatttaggacataggaaaaaattggatgcagaagaaagacgc
gtaagacagaaaaaagctcgtgaggagttcactaagatgttggaagagtccaaggaactc
gcatcatctaccagatggagcaaagctgttagtatgtttgagaacgacgaacggttcaaa
gctgttgaacgtgctagagatcgagaggatctttttgaaagctacatagtggaacttgag
aggaaggaaaaagaaaaggctgcagaggaayacaagaaaaatattgctgaatacaggaaa
tttcttgagtcatgcgactacataaaggtgagcagccagtggcggaaagtacaagatcgg
ttggaagacgacgaaagatgctcacgtcttgagaaacttgatcgcttgcttattttccag
gactatattcgtgacttggaaaaggaggaagacgaacagaagaagatacaaaaggaacgt
gtgcgaagaattgaacgaaaaaaccgtgacgagtttcgcaaactcatggaagaacacatt
tctgtgggtgttcttacagctaaaactttctggcgtgattattgtttgaaggttaaggag
ttgcctcagtaccaagctgttgcttcaaatatatctggttcgacaccaaaggacttgttt
gaggatgttcttgaggaattagagaataagtatcatgaagaaaaagcccagataaaagat
gtgatgaaggcagcgaagattaccatcacttcatcatggacatttgatgactttaaggct
gccattgaagagggtggttctcttaccgtatcagatataaattttaagcttgtatatgag
gacttactagatagagccaaagagaaggaggagaaagaagccaaaaggcgtcaacgtctg
gctgatgacttctcaagactgctacagtcattcaaggagatatcaacttcttccaactgg
gaggatagcaaacaactttttgaagagagtgaagagtacagatcaattggggaagaaagt
tttgcgagggaagtttttgaggaatacatcatgcatttacaagaaaaggcaaaagaaaag
gaacgcaagcgtgaggaggagaaggctaaaaaggaaaaagaacgggaggaaaaggagaag
cggaaggagaaagagcgaaaggataaggagagagaacgtgaaaaagaaaagggccggatt
aagaaggatgaatcagatagtgaaaatgtagatgcaagcgaaactcatggctacagagaa
gataagaaaagagaaaaagagaaagataggaagcaccggaagcggcatcatagtgccact
gatgatggtggttctggtaaagatgagagagaggagtctaagaagtcacgcaaacatagt
agcgaccgaaaaaaatcaaggaagcacgcatattcacctgaatcagacagtgagagtagg
cacagaaggcacaagagagatcatcgagatggttcccgtagaaatggtggacatgatgaa
cttgaagatggggagcttggtgaagatggagaaattcaatag
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