Momordica charantia (bitter melon): 111011844
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Entry
111011844 CDS
T05045
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111011844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111011844
Enzymes [BR:
mcha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
111011844
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111011844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
HHH_2
HHH_8
HHH_5
Motif
Other DBs
NCBI-GeneID:
111011844
NCBI-ProteinID:
XP_022141451
UniProt:
A0A6J1CJ84
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MFSADAPQPSRMHSLRPLPMTKRLRTTPPSTPSVKSPPPPPPPPTTISGHHSSSNPKTVP
KWVPLNLTKSDLFLPLTFPTGQTFRWKQTGPLQFTGAVGSHLISLKQLPNGDVSYCTHSE
SSSTSSAAAAARQALLDFLNAGISLSAIWEVFSAADPRFEVLARHLGGARVLRQHPLECL
VQFLCSSNNNIGRITKMVDYISSLGNYLGNVEGFEFHEFPSLERLSLVSEAELREAGFGY
RAKYIVGSVKALEAKPGGGAEWLLSLRDLDLEEVIDALSSLPGIGPKVAACIALFSLDQH
HAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVNKYGKYAGWAQTLLFVADLPQ
QKALLSSHLEKSTKRKKSTKQQKEKN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgttttcggcggacgctccccaaccctcccgaatgcactcactcagaccccttccaatg
acgaagcggctcagaaccactccaccgtcgactccctccgtcaagtctccgccgccgccg
ccgccgccgcccaccaccatctccggccaccattcgtccagcaaccctaaaaccgtcccc
aagtgggtccccctcaatctcacaaaatcagacctctttttgcctctcactttccccacc
ggccaaaccttccggtggaagcaaaccgggcctctccagttcaccggcgctgttgggtct
catctcatatctctcaagcaacttccaaacggcgacgtttcgtattgcactcactctgag
tcttcttcaacatcctccgccgccgccgccgccaggcaggccttgcttgatttccttaac
gccggaatctccctgagcgccatttgggaggttttttcggcggctgatccgaggttcgag
gtgttggcgcgccatttggggggcgctcgagttctcaggcaacaccctctcgagtgtttg
gttcagtttctatgttcttcaaacaacaatattgggagaatcaccaaaatggtggattac
atctcatcactagggaattatttgggcaatgttgaaggttttgagttccatgaattcccc
tctttggagcgcttgtccttggtctctgaggctgagcttagagaggcaggctttggttac
agggctaaatacatagttggaagtgtaaaggcactggaagccaaacctgggggaggtgca
gaatggcttctgtctcttcgtgatttggatctcgaagaggtgattgatgcgctttcttcg
ttacccggcatcggtccgaaagtggcagcttgtattgctctcttctccctcgatcagcat
catgccattcctgtagatacacatgtatggcagattgctactaggtaccttgtccccgag
ctcgctggtgcacgtctgacaccaaagctttgcaaccgtgtggctgaggcattcgtcaac
aagtatggaaaatatgctggttgggctcaaactctgcttttcgtagccgatttacctcaa
cagaaagccctcttatcatcacatcttgagaagagtactaagaggaaaaaatctacaaag
cagcagaaggagaagaactga
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