Momordica charantia (bitter melon): 111012054
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Entry
111012054 CDS
T05045
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03013
Nucleocytoplasmic transport
mcha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111012054
03015 mRNA surveillance pathway
111012054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111012054
03041 Spliceosome [BR:
mcha03041
]
111012054
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111012054
Spliceosome [BR:
mcha03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
111012054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
111012054
NCBI-ProteinID:
XP_022141774
UniProt:
A0A6J1CJS4
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPAELDQLVDTTKVKMDVIRPWIATRVTELL
GFEDEVLINFIYGLLDGKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLISAQKNASGVPQ
QFLDAKEEEIRKKKAETDFLANEIQKKREKENREIEEQISKKMDDGAEKVANAALEPTIT
SKNMRSRDMRNHPEDEDETEKRNGVRGRSRGSPSRSLSQPISNSRSYSNDRHKSRSMSRS
PQRRRPSFSRGRLNHSPPRRSMSPRRRDHHDSFSSRRRSSYSRRRSRSTSHRKSLSPTVH
QLRSPSQHSSPSSPHKSPYRSSSPVQHRSSSPVRRRSLSPVKHNRAPSPRGHRRSQSPIR
RRRSPSPIQRXRSPSPKWRRRSPSPEWRRRPPSPGRRRRSPSPIRRRRSPSPIRHRRSPS
PPRRRRSPSPPRHRRSPSPPQRRRSPSFARRRRSPSPSHRRMSPSPTRYRRLPSPMRRHK
SRSPIRRPMSPSSPVRRIDRSSPLGHRRIPSPVQRRSPSTSLSKSPPLPQRSSPTHLKRS
SPSRHRSISPYDRSSSEERENLSTAKRKSAQHQRRSLSQSPRDRTRDVQTSPVSQQPSRS
MRSPQGDARERNNSNNRARLPSPSLEKSPALSDSPPVTRSVSDDRRRLSSPRSRAKQXRR
DNHSTRAGEEETTYAREGGNLEXRPSLKKSLNSTVVGKMKDSPGDVKVPSPGSVKRPRKE
VPPSPBQQKSSSLHKEPLLVEEQQPSHLREGIKQDEKSYLRSSKAKETDSLKVEKVEHNN
RSEASDSDLEEGYKRKTGSKEKKRHRRSDRRDTSSDSEDSYDTELERKEARRRKKEERRL
RKEKKRQKREERRRKKEERRAEKTKAKNLSDSYSDDGRVAKDEPYPSDGPDEAEHRRLEV
ELRKKALESFNAKKGTRP
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggctttttccggggtacgtctgcggaccaagacactcgtttttcgaacaag
caagcgaagctgctgaagacacagaagttccctgccgaactagaccagttggtggatacg
acaaaggtgaagatggatgttatcaggccgtggattgctacgagggtgactgagcttctt
gggtttgaagatgaagttcttattaacttcatatatggccttttggatggcaaggaggta
aatgggaaggaagtacaaatacaactcactgggttcatggaaaagaatactgtgaagttt
atgaaagagctgtggacactgcttatcagtgcccagaagaatgccagtggtgtacctcaa
caatttttggatgccaaagaagaagaaattaggaagaagaaggcagagacagattttctc
gcaaatgaaattcagaaaaaaagagagaaggaaaatcgagaaattgaggagcagatatca
aaaaagatggacgatggggctgaaaaggtggccaatgctgcgttggaacctacaattaca
tcaaagaatatgcgytcaagggatatgagaaatcatccagaggatgaggatgagactgaa
aagagaaatggtgttagaggaagaagcagaggctcaccttcaaggtctttgagccagcca
atttctaattctagaagttattcaaatgatagacataaatcaaggagtatgtccagatca
cctcaacgtcgacgaccctctttttcacgtggaaggttgaatcattccccaccaagaagg
tctatgagtccacgtcgtagggaccaccatgattcattctcttctcgacgtagatcgtca
tattcaaggagaagatctagatctacttcacatcgtaaatccctctccccaacagtgcat
caattgcgttctccttctcaacatagttcaccatcttctcctcataaatcaccatatcgt
tcatcatcacctgtgcaacatcgatcatcatcaccggtacgtcgtaggtcgttgtcacct
gttaagcataatagagcaccatcacccagggggcatcgcaggtcacaatcaccaattaga
cgtcgtcgatcgccttcacctattcaacgtcrtagatcaccatcacctaaatggcgtcgg
agatcaccatcacctgagtggcgtcgcaggccaccatcacctggacgtcgtcggaggtca
ccatctcctatacggcgtcggaggtcaccgtctccaatacgacatcgcaggtccccatct
ccaccacggcgacgaaggtcaccatctccaccacggcatcgaaggtcaccgtctccacca
caacgtcgaaggtcaccttcctttgcacgtcgtcgtagatcaccatctccatcacatcgt
cgtatgtcaccttctccaacacgctaccgcagattgccctcacctatgagacgccacaag
tctcgttctccaattcgacgacctatgtcaccttcctcaccagtacggagaattgatagg
tcatcaccacttggtcatcgtagaataccctcaccagtgcaacgtagatctccatcaacc
tcattgagcaaatcccctccattgccacaaaggtcatctcctacacatctcaagagatca
agtccatctagacatagatccatttcaccatatgatcggagttcatcagaggagcgggaa
aacctctcaactgcaaaaagaaaatctgcacaacatcagaggaggtctctctctcaatct
ccccgggatagaaccagagatgttcagacatctccagtgtcccaacaaccttctagatct
atgaggtcgccacaaggagatgctagggaacggaataattccaataacagagctcgtttg
ccatcaccgtctctggagaagtctccagcactatctgattctccaccagttacaaggagt
gttagtgatgataggaggaggttaagttctccacgatcaagggcaaagcaacrtcgtcgc
gacaatcattcaacaagggcaggggaagaagagaccacctatgctagggagggtggaaat
cttgaatmtaggccttcactgaagaaatcactgaattctaccgttgtcggtaagatgaaa
gattctccaggggatgttaaagttccctcacctggaagtgtaaagcgtcctcgaaaggag
gtgcctcctagtcccratcaacaaaaatcttcatcattacacaaagaacctttactagtt
gaggagcagcagccatcacatttaagagaaggtattaaacaagatgaaaaaagctacttg
cgctcaagtaaggccaaggaaactgactctttgaaagttgaaaaagttgaacataataat
cggagtgaggcttcagattctgatttggaggaaggctataagcgtaaaactgggagtaag
gagaagaaaaggcatagaagatcagacagacgagacacttcttcggattctgaagacagc
tatgatactgaattggagaggaaggaggcgaggaggaggaagaaggaggagaggaggctg
cggaaggagaagaagcgccaaaaacgtgaagaacgccgacgcaaaaaggaagaacgacgt
gcagagaagacaaaagcaaagaacctcagtgatagttactcagatgacggtcgagttgca
aaggacgagccttatcccagtgatggtccagatgaggccgagcacagaagactcgaggtt
gagttaaggaagaaggcgctggaatcgttcaatgcaaagaaagggacaaggccctga
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