Momordica charantia (bitter melon): 111012330 Help Entry 111012330         CDS       T05045                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism mcha  Momordica charantia (bitter melon) Pathway mcha03040   Spliceosome Brite KEGG Orthology (KO) [BR:mcha00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     111012330  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mcha03019]     111012330    03041 Spliceosome [BR:mcha03041]     111012330 Messenger RNA biogenesis [BR:mcha03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      111012330 Spliceosome [BR:mcha03041]  Complex B   Other components    Prp19-related factors     111012330  Complex C     111012330 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_15 TPR_19 ARM_TT21 ARM_TT21_C Motif Other DBs NCBI-GeneID:  111012330 NCBI-ProteinID:  XP_022142130 UniProt:  A0A6J1CK21 LinkDB All DBs Position Unknown AA seq 921 aa AA seqDB search MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARADAPFKKRFIIYERALKALPGSY KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKSVTR TRRTFDRALCALPVTQHDRIWEPYLIFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL VNSNLWQEAAENLASVLNDEQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML AHKMENMDLSDEEDEVQENGLEEEELEEDIRLDVDLSVSKFEKKILQGFWLYDDSDIDLR LARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKA VGKPHTLWVAFAKLYESHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFK GALELMRRATAEPSVEVKRKVAADGNEPVQMKVHKSLRLWTFYVDLEESLGTLESTRAVY ERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKR YGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAKRAMKVYDQATKAVPNNE KLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCLKYAELEKSLGEIDRARG IYVFASQFADPRSDVNFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLM QKDQTMNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDAAKDNSRKVGFVSAGVESQAEG GLKGAANHEDIELPDESDSDEDENVEIAQKEIPSAIFGGLVRKREESDEADGNKENGAAA VEKDDDSHLGALERIKRQKRA NT seq 2766 nt NT seq  +upstreamnt  +downstreamnt atgtcgatttctcaagatttatatccatcgcaagatgacctcctctacgaagaagagctt cttcgaaatcctttcagtttgaagttgtggtggcgctacctcatagcacgagctgacgca ccattcaagaagcgattcattatttacgagcgagctctcaaggccctgccaggtagctat aagttatggtatgcatatctgcgagaacgactcgatctggtacgaaatcttcccattact cattctcagtatgaaactctcaacaacacgtttgaacgagcgctggtgaccatgcataaa atgccaagaatatggataatgtacctgcagacgttgacaaaccagaaatcagtgacccga acgcgtcggacgttcgaccgagccctctgtgctcttccagtgacacaacatgatcgaatt tgggagccttacctcatttttgtaagccaaaaggggattccaattgagacgtcgcttaga gtttatcgaaggtatttaaaatatgatccaactcatattgaagacttgattgaatttttg gttaactcaaatctgtggcaagaagctgcagagaatttggcttccgtgttgaatgacgaa caattttattctattaaggggaagaccaagcaccggctgtggctagagttgtgtgatttg cttactaggcatgctactgaggtttcagggttgaatgttgatgccataataaggggcggc attaggaagttcacagatgaggtagggcgcttatggacatcacttgcagaatattacatc agaaggaatttacacgagaaggcaagagacatatttgaagaagggatgactaccgttgtt acagtaagagattttagtgtgatttttgattcatactctcaattcgaggagagtatgctg gctcataagatggaaaatatggatttgagtgacgaggaagatgaagtgcaggaaaatggc cttgaggaggaggagttggaggaggacatccggttagatgttgatttatcagtttctaag tttgagaagaagatacttcaagggttttggctgtatgatgatagtgacatagatttgagg ctagctaggttagaccatctcatggacagaagaccagaattagctaatagtgttctccta cgacaaaatcctcataatgtcgaacaatggcatcgaaggattaaattatttgagggcaat cccacaagacagatattgacatatactgaggctgtgagaacagtggaccccatgaaagct gttggtaagcctcataccttgtgggttgctttcgctaagctatacgagtcccacaaagat cttccaaatgcaagagttatttttgataaagctgtacaagttaactacaagactgtggat aacttggctagcatttggtgtgaatgggcggaaatggaattgaggcataaaaattttaaa ggagctctagagctcatgcggcgagctacagcagagccatctgttgaagtcaaacgaaaa gtggctgctgatgggaacgaaccagtccagatgaaggtgcacaagtccctaagactttgg accttttatgtggatttggaggaaagtcttggaaccttggagtccacccgtgcagtttat gagcgaatattggacttaagaattgctaccccgcaaataataatcaactatgctttgctt ctggaggaacacaagtactttgaagatgcattcaaagtatatgaaaggggtgtcaagatc tttaagtatcctcatgtcaaagatatatgggtcacgtatctatccaagtttgtaaaaaga tatgggaagacaaaattggagcgggcaagagaactctttgagcatgcagttgaaacagca cccgctgattcagttaggcctttgtatcttcaatatgcgaagcttgaggaagaccatggt ttggcaaaacgagctatgaaggtctatgatcaagcaactaaagctgttccgaataatgag aagttgagtatgtatgaaatatacattgctcgtgcagccgagatatttggtgttcctaaa actagagaaatctatgaacaagcaatagaatctggtcttcccgatcaagatgtgaagacc atgtgcttgaagtatgctgagctggagaagagtttgggagaaattgatcgtgctcgcgga atttatgtatttgcttcacagtttgcagaccctcgatcagatgtgaacttctggaacaaa tggcacgagtttgaggtgcaacatggaaatgaagatacctttagagagatgcttcgaatt aaaaggagtgtttctgctagctatagccagacacattttattctgcccgagtatctaatg caaaaggatcaaacaatgaaccttgacgaggcaaaagacaaattgaagcaggctggggtt acagaagatgaaatggctgctctggagaggcagttggcccctgcaattgaagatgcagcc aaagataacagtcgtaaagttggctttgtgagcgctggagtcgaatcacaagccgaagga ggattaaagggtgctgctaatcacgaagacatcgagttgccagatgagagcgattcggat gaagacgagaatgttgaaattgcacagaaagaaatcccatctgcaatttttggaggcctt gttcggaaaagggaagaatccgacgaggcagacggtaataaggaaaatggtgctgctgca gtagaaaaggacgacgacagccaccttggtgctcttgagaggattaaaaggcaaaagaga gcctga

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