Momordica charantia (bitter melon): 111012507
Help
Entry
111012507 CDS
T05045
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03020
RNA polymerase
mcha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111012507
09124 Replication and repair
03420 Nucleotide excision repair
111012507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111012507
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111012507
Enzymes [BR:
mcha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111012507
Transcription machinery [BR:
mcha03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111012507
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111012507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
111012507
NCBI-ProteinID:
XP_022142367
UniProt:
A0A6J1CMJ7
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MDEYEEYDRNMNEDDDIDQSMQDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQN
TMQEIVDESADIEIRPESQHNPGHQSDVAETIYKISFGQIYLSKPMMTESDGETATLFPK
AARLRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNS
EKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAE
SQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHI
CYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEML
PHVGVGEFCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLF
RKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQV
LNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALM
VYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRR
LRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPE
DGGWHDLVAKGFIEYIDTEEEETTMISMTISDLIQARINPVEAYSDTYTHCEIHPSLILG
VCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAME
HLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLV
KEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEAQGQAARY
SRRDHSISLRHSENGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGM
TYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTV
DNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQ
ILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCECCGLIAIA
NLKKSSFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMFTKEIKPLKDQKKKGS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatacgaggagtatgatcggaatatgaacgaggacgacgatattgatcagtct
atgcaagatgacgaagaagagatcactcaggaagacgcttgggcagtgatttcagcctat
tttgaagagaaggggttagtccggcagcagctcgattccttcgatgagtttattcagaat
actatgcaggaaattgtggacgaatctgccgatattgagattcgtcccgagtcgcagcac
aatcccgggcaccagtcggatgttgctgagacaatatacaagatcagctttggccagata
tacttgagtaagccaatgatgactgaatctgatggagagactgcaacattatttcccaag
gctgcacgactgaggaatctaacatactcagcgcctttgtatgtggatgtttcaaaaaga
gttataaagaaaggccatgatggtgaagaagttactgaaacacaagattttacaaaagtt
tttattgggaaggtacccatcatgctccgatcgagttattgcacgctgtatcagaattct
gagaaggatctgactgagcttggggaatgtccatatgaccaaggaggatattttatcatc
aatgggagtgaaaaggttcttattgcacaagagaagatgagcacaaatcacgtatatgtt
ttcaagaaaagacagccaaataagtacgcctttgtggcagaagtccggtctatggctgag
tcgcaaaatagacctcctagtaccatgtttgtacggatgctttctcgaactagtgccaag
gggggctcttcaggacaatacatacgtgccactctaccttatattcgaaccgagattcca
attattattgtgtttcgtgctttaggatttgttgctgacaaggatattctagagcatata
tgttatgacttctctgatactcaaatgatggagttgcttagaccttcccttgaagaggcc
ttcgttatccaaaatcaacaggttgcattagactatatcgggaagagaggatcaacagtt
ggtgtgaccaaggaaaagaggattaagtatgccaaagagatccttcaaaaggaaatgctt
ccccatgttggcgttggtgaattttgtgagactaagaaggcatactattttggttatata
attcaccggctactcttatgtgcccttggccggagagctgaagatgatagggaccactac
ggaaacaaaaggctggaccttgctggtcctttactcggaggcttgtttagaatgctattt
agaaagttaacaagagatgtgagaggttatgtacaaaagtgtgttgataatggaaaggat
gttaatttgcaatttgccatcaaagcaaaaactattacgagtggcctgaagtattcactt
gcaactggaaactgggggcaggcaaatgcagctggtacaagagctggagtgtcacaggtg
ttaaatcgtttgacatatgcttctaccttgtcgcatttacgaagactgaattcaccaatt
ggtcgagaaggtaaattggccaagcctcggcagttgcataattcacaatggggaatgatg
tgtcctgctgaaacacccgaaggacaagcatgtggactggtaaaaaatctggcattgatg
gtctatataacagtcggatctgcggcatatcctattttggaatttttggaagaatggggc
acagaaaattttgaggaaatttctcctgctgtcattcctcaagcaacaaaaatttttgtc
aatggttgttgggttggtatccaccgggatcctgaaatgttggtgaagactttgagacgg
ctgaggcgacgggttgatgtaaatactgaagtaggagtggttagagatatccgtctgaaa
gaattacggatatatactgattatggtcgatgcagtcgtccattattcattgttgagaaa
caaagactcctcataaagaagaaggatatccatgctcttcagcagagggaatccccggaa
gatggtggctggcatgatcttgtggcaaagggattcatagaatacatagatactgaagaa
gaggaaactactatgatttccatgacaattagtgatcttatacaagcaaggataaaccca
gttgaggcttattctgacacctacactcattgtgaaattcatccatcattgattttgggc
gtttgtgcttcaattattccatttcctgaccataaccagtccccacgtaacacttaccaa
tctgctatgggtaaacaagctatgggaatctatgtcaccaactaccaatttcgaatggat
actttggcctatgttctgtattatccacaaaagcctcttgtgactacacgagctatggaa
cacctccatttcaggcagcttccagctggcattaacgccattgttgccattgcttgctac
tccggttataaccaggaagactcggttatcatgaatcaatcctctattgaccgtggattt
tttaggtcacttttcttccggtcatacagggatgaggaaaaaaaaatgggaactctagta
aaagaagattttggacggccagacagaagtaatactatgggtatgaggcatggctcttat
gataaattggacgatgatggtcttgcaccccctggtactagagtatcaggtgaggatgtt
attattggaaagacgactcctctttctcaggaagaagctcagggacaagctgcacgttac
tcaagacgtgaccatagcattagtttacgtcacagtgaaaatgggattgtggatcaagtt
ctactgactacaaatgctgatgggttgagatttgttaaagtgagggtgagatctgtccga
atacctcagattggggataagttcagtagtcggcatggtcaaaaaggaacagtggggatg
acttatacacaagaagacatgccttggactgtggaaggaatcacccctgatattattgtg
aatccacatgctattccctctcgaatgactattggtcagcttattgagtgtatcatggga
aaggtggcagcccacatgggaaaagaaggagatgctaccccattcactgatgtcactgtg
gacaatatcagtaaggctctgcataagtgtggttatcagatgcgtggattcgagaccatg
tataatggccatacaggccggcggctctcagccatgatattcctcggcccaacctattac
caaaggctgaagcatatggttgatgacaaaatccattcacgtggaagaggtcctgtgcag
atccttacaaggcagcctgctgaaggtcggtctcgagatgggggtctccgatttggagaa
atggagcgcgactgcatgattgcccatggtgctgctcatttccttaaggagaggttgttt
gatcaaagtgatgcgtatcggatccacgtctgcgagtgctgtggattaatagccatcgca
aatctcaagaagagttcttttgaatgtaggggttgcaaaaacaaaacagacatcgttcag
gtgtacatcccttacgcctgtaagcttctcttccaagagctcatggctatggcaatagca
ccaaggatgttcacaaaggagattaaaccattaaaagaccaaaagaagaaaggatcctga
DBGET
integrated database retrieval system
