KEGG T05045: 111012547

Momordica charantia (bitter melon): 111012547

Entry

111012547         CDS       T05045

Name

(RefSeq) probable CCR4-associated factor 1 homolog 11

K12581

CCR4-NOT transcription complex subunit 7/8

Organism

mcha Momordica charantia (bitter melon)

Pathway

mcha03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:mcha00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111012547
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcha03019]
    111012547
Messenger RNA biogenesis [BR:mcha03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111012547
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     111012547

SSDB

Motif

Pfam:

CAF1

Other DBs

NCBI-GeneID:

111012547

NCBI-ProteinID:

XP_022142408

UniProt:

A0A6J1CN71

LinkDB

Position

Unknown

AA seq 278 aa
MVVQDLKNNSKPIQIREVWASNLESEFELIRDLIDQFPCVSMDTEFPGVVFTDPAKPYHR
QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTGGSRFIWEFNFMDFDVARDVH
APDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKV
LTRRSLPSRLEEFLGVLRVFFGDQVYDVKYMMRFCKSLYGGLDRIAKILNVSRAVGKCHQ
AGSDSLLTWHAFQKMRDTYFVQNGLEKHAGVLYGLEVL

NT seq 837 nt +upstreamnt +downstreamnt
atggttgtccaggatctgaagaacaacagtaaaccgatccaaatccgtgaagtttgggcg
tcgaatctcgaatcggagttcgagttgattcgcgacttgatcgatcagtttccttgcgtt
tccatggacacggagtttcccggagtcgttttcaccgatcctgcgaagccgtaccaccgc
cagaatcggccgtcggaccactaccgcctcctcaaatccaacgtcgacgctctgaatctg
atccagatcggaatcactctctccgactccgacggcaacctcccggacctcggcaccggc
ggcagccgcttcatctgggagttcaacttcatggacttcgacgtggcgcgtgacgtccac
gcgccggactcgatcgagcttctgcggcggcaggggatcgacttcgaccggaaccgagtg
gaaggtatcgactcttgccggttcgccgagttgatgatgtcctcgggactcgtctgcaac
gactcagtgagttgggtgacgtttcacagcgcgtacgatttcgggtacctggtcaaggtt
ttgactcggcggagcctcccgagtcggctggaggaattcctcggcgttctcagggttttc
ttcggcgatcaggtgtacgatgtgaagtacatgatgcggttctgtaagagcctctacggc
ggtttggaccggatagcgaagatcttaaacgtgagccgggcggttggaaagtgccaccag
gccggttcggatagcctgctgacgtggcatgcgtttcagaaaatgagggacacgtatttt
gtacagaatgggctggagaaacatgccggcgtgttgtatggattggaagttttgtaa

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