Momordica charantia (bitter melon): 111012822
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Entry
111012822 CDS
T05045
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcha03009
]
111012822
Ribosome biogenesis [BR:
mcha03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
111012822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_Vps41
NBCH_WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT122_1st
PQQ
Beta-prop_WDR11_1st
Arb2-like
PEP5_VPS11_N
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
111012822
NCBI-ProteinID:
XP_022142784
UniProt:
A0A6J1CMH2
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MTMLSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPV
TASGSIHLYNWWTSSAFQSLSVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS
LPAHKKPVSCLKLSDDGSLLISGGDDGKIIVIPIFQLVEANPQDDSTKRILYQFSAHADS
VTAISTGMGMYSSQIVSCSLDGRCKFWNLLSGTLSHTVVFPCAIFSVVLDPKGAQFFAAG
SDGFVYKGSLRHKNKHLMGTGSDLISPVSNDLVHKASLRHKNKHLMDTSSELIPWAPKHD
SAVVSIVIVNEGNHLISAAEDGSIWVWEINTGQIIMDLENEMGRSISDLVTATHRSHEKE
QSGRLGSHGRELESESFRLPNRMLGLSIDQTVDMQRALAAAGSDVRRAIGLLESAIAVYE
KMLELILKEAKAANC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctatcttccccacaagaagttgtccttgccagctctcctgatggccccatt
gttgcctatgatgcctccacaggcacccctctagccagcttcaacggtagccggtcgcct
cgccgtggcatcacccgggctgggagaagtttcatagccgtctcccacatctgcccggtc
acggcttcgggttcgatccacctttataattggtggacttcttctgccttccaaagcctc
tctgtacctgaacctgtagctcctctcacagccactcctgatgggttctatctgtttgct
ggtggcctttcaggctgcatccatactctctctttaccatcaggggatgttctcaactct
ttacctgcacacaagaagccagtctcttgcctcaaactcagtgatgatgggtcacttctg
atttcaggtggggatgatggcaaaatcattgtcatcccaatatttcaacttgtcgaagcc
aacccgcaagacgattcgacaaaacgcattctgtatcagttttcagcacatgctgattca
gtcactgccatttccactggcatgggtatgtacagttcccaaatagtctcctgctcattg
gatggcagatgcaagttctggaacttgctctcaggcacactctcacacactgtggtgttc
ccttgtgccattttcagtgtggtcttggacccaaaaggggcacagttttttgctgcagga
tctgatggcttcgtgtacaagggctcattaaggcataaaaacaaacaccttatgggcaca
ggctctgatctaatttcaccagtgtctaatgacttggtgcacaaggcctcattgaggcat
aaaaacaaacaccttatggacacaagctctgaactaattccatgggctccaaaacacgac
agtgcagtggtctctatagtcatagtgaatgaaggaaatcacttaatatccgcagcagaa
gatgggagcatctgggtttgggaaataaacacggggcagatcattatggaccttgaaaat
gaaatgggaagaagcataagcgatttggtgacggccacacatagaagccatgaaaaagaa
cagagtggtagattgggaagccatgggagagaattagagagtgagagctttagattaccc
aatagaatgctgggtttgtcaattgatcaaacagttgatatgcaacgtgcgttggcggcg
gccggaagcgacgtgaggagagccattgggctgctggaatctgccattgctgtttatgag
aagatgttggagttgatcctcaaggaagctaaagcagcaaattgctaa
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