Momordica charantia (bitter melon): 111013262
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Entry
111013262 CDS
T05045
Name
(RefSeq) THO complex subunit 4D-like
KO
K12881
THO complex subunit 4
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03013
Nucleocytoplasmic transport
mcha03015
mRNA surveillance pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111013262
09122 Translation
03013 Nucleocytoplasmic transport
111013262
03015 mRNA surveillance pathway
111013262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111013262
03041 Spliceosome [BR:
mcha03041
]
111013262
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111013262
TREX complex
111013262
Spliceosome [BR:
mcha03041
]
Complex C
Other components
EJC/TREX
111013262
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111013262
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
DUF5320
RRM_11
Motif
Other DBs
NCBI-GeneID:
111013262
NCBI-ProteinID:
XP_022143379
UniProt:
A0A6J1CP51
LinkDB
All DBs
Position
Unknown
AA seq
281 aa
AA seq
DB search
MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGRVVIGSIRRGPLSINTRPSA
FSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEIG
DLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPVS
ARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGRGRGGWSRGQGQV
GGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggctacgcctctggatatgtcactagaggacatgataaagaagaataaccgtgagaag
cttagagcacgaggtagggcccgtcgtgggcgtggagcaggtgggtcttttaatggtgga
agagtagtgatagggtcgattcgtagaggccctctcagcataaatacacggccatctgct
ttctcaattagcaagcccccacgcagaatgaagaatgttcaatggcagcatgatttattc
gaagacagtcttagagcttcagggatttctggaattgaaattggcacaaagttgtacgtt
tccaacttggattatggggtgaccaaagaagatataagggagttgttctctgagattgga
gacctgaaaagatttgcaattcattatgacaaaaatggccgtccaagtggctcggcagag
gtggtatatactcgtaggagtgatgcatttgctgctttgaagcgctataacaatgtgtta
ttggatgggaagcccatgaagattgaaattcttggcgataatgctgaaatgccagtttct
gcacgtataaacgtcactggactgaatgggagaagcaggaggacagttgttctaacgtct
gaatctggtcgtaccgatagctctaccgtggtcaaccattttcctggtccaagcaatcgt
ggagcgctgaggggccgtggccgtgggcgagggggctggagccgtggtcagggtcaagtt
ggaggtggccgaggtcgaggacgtggtcgtgggcgtggcctggggaggaagaaaaccgtg
gagaagtcctcagatgaactcgacaaggatctcgaaaattatcatgcagaagccatgcaa
acctga
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integrated database retrieval system