KEGG   Momordica charantia (bitter melon): 111013262
Entry
111013262         CDS       T05045                                 
Name
(RefSeq) THO complex subunit 4D-like
  KO
K12881  THO complex subunit 4
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03013  Nucleocytoplasmic transport
mcha03015  mRNA surveillance pathway
mcha03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111013262
  09122 Translation
   03013 Nucleocytoplasmic transport
    111013262
   03015 mRNA surveillance pathway
    111013262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcha03019]
    111013262
   03041 Spliceosome [BR:mcha03041]
    111013262
Messenger RNA biogenesis [BR:mcha03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111013262
    TREX complex
     111013262
Spliceosome [BR:mcha03041]
 Complex C
  Other components
   EJC/TREX
    111013262
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111013262
SSDB
Motif
Pfam: RRM_1 FoP_duplication DUF5320 RRM_11
Other DBs
NCBI-GeneID: 111013262
NCBI-ProteinID: XP_022143379
UniProt: A0A6J1CP51
LinkDB
Position
Unknown
AA seq 281 aa
MATPLDMSLEDMIKKNNREKLRARGRARRGRGAGGSFNGGRVVIGSIRRGPLSINTRPSA
FSISKPPRRMKNVQWQHDLFEDSLRASGISGIEIGTKLYVSNLDYGVTKEDIRELFSEIG
DLKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEILGDNAEMPVS
ARINVTGLNGRSRRTVVLTSESGRTDSSTVVNHFPGPSNRGALRGRGRGRGGWSRGQGQV
GGGRGRGRGRGRGLGRKKTVEKSSDELDKDLENYHAEAMQT
NT seq 846 nt   +upstreamnt  +downstreamnt
atggctacgcctctggatatgtcactagaggacatgataaagaagaataaccgtgagaag
cttagagcacgaggtagggcccgtcgtgggcgtggagcaggtgggtcttttaatggtgga
agagtagtgatagggtcgattcgtagaggccctctcagcataaatacacggccatctgct
ttctcaattagcaagcccccacgcagaatgaagaatgttcaatggcagcatgatttattc
gaagacagtcttagagcttcagggatttctggaattgaaattggcacaaagttgtacgtt
tccaacttggattatggggtgaccaaagaagatataagggagttgttctctgagattgga
gacctgaaaagatttgcaattcattatgacaaaaatggccgtccaagtggctcggcagag
gtggtatatactcgtaggagtgatgcatttgctgctttgaagcgctataacaatgtgtta
ttggatgggaagcccatgaagattgaaattcttggcgataatgctgaaatgccagtttct
gcacgtataaacgtcactggactgaatgggagaagcaggaggacagttgttctaacgtct
gaatctggtcgtaccgatagctctaccgtggtcaaccattttcctggtccaagcaatcgt
ggagcgctgaggggccgtggccgtgggcgagggggctggagccgtggtcagggtcaagtt
ggaggtggccgaggtcgaggacgtggtcgtgggcgtggcctggggaggaagaaaaccgtg
gagaagtcctcagatgaactcgacaaggatctcgaaaattatcatgcagaagccatgcaa
acctga

DBGET integrated database retrieval system