Momordica charantia (bitter melon): 111013938
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Entry
111013938 CDS
T05045
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111013938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcha04131
]
111013938
Membrane trafficking [BR:
mcha04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111013938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WDR55
WD40_Gbeta
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EML
TPR_VPS8_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_THOC3
zf-RING_Vps41
zf-RING_2
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
111013938
NCBI-ProteinID:
XP_022144189
UniProt:
A0A6J1CRK3
LinkDB
All DBs
Position
Unknown
AA seq
1819 aa
AA seq
DB search
MTKELTDTGVLPLMELDLNAFIHAHLSSGDDDDDDDPSFPHRTIDEILKESGSPPSSPPH
SPPYGGDRAVATRDGNSTVMDDTDADYQVASINVGDGVWARDRIRDDVPDNDEFRITKGL
KCVAEQRSVDDVNFDESTTILPPVEANDGSVSDYAEKNVCSTELRPSILDVDESNEGAIP
SSSEPDNDGSAVDYGSLEWETQDFKKCLQQSKDTEVDLVIKDPSVVNDISELGETTEHMD
DSTISEQAEMMLLPSTNPLEAAEEIEKKQAFTALHWEEGVAAQPMKLEGIKGGSTTLGYF
DIQADNSISRTISSHSFKREHGFPQVLAVHANYIAVGMSKGNIVVVASKYSAQNGDNMDA
KMLLLGLQGDKSTAPVTSLCFNLQGDLLLAGYNDGHITVWDVLRASAAKIISGEHTSPVV
HSLFLGQDAQVTRQFKAVTGDSKGLVLLHTFSVVPLLNRFSIKTQCLLDGQKTGTVLSAS
ALLLNESCGSSLPPTLANVAVSTSSIGSMMGGVVGGDSGWKLFNEGSSLVEEGVVIFATH
QTALVVRLSPTLEVYAQLSKPDGVREGSMPYTAWKCSQSFETSPSEAVERVSLLAIAWDK
MVQVAKLVKAELKVCGKWSLESAAIGVAWLDDQVLVVLTITGQLFLFEKDGTMIHQTSVF
VDGFDKEDFIAYHTHFVNVLGNPEKAYHNCVAVRGASVYVLGPMHLIISRLLPWKERVQV
LRKAGDWMGALSMAITIYDGQAHGVIDLPRSLESLQELVVPFLIELLLSYVDEVFSYISV
AFCNQIEKNEKSVDVTSGGHSAHSEIKEQYNRVGGVAVEFCVHIRRTDILFDEIFSKFVA
VQQRDTFLELLEPYILKDMLGSLPPEIMQALVEHYSHKGWLQRVEQCVLHMDISSLDFNQ
VVRLCRDHGLYSALVYLFNKGLDDFRTPLEELLAVLQTSKSERASAIGYKTLVYLKYCFS
GLAFPPGQGTLAHSRVQSLRDELLQFLLENSDSVDTRSISNKSSEIGYLKLYHLLELDTG
ATLDVLRCAFVEGEIPKTNSSPNGLDDVSMQVQEEKNSTSGRKNVLIQSIVDALVHVLDQ
AICQTDRSAGGEDIALVGDWPSKKDLVHLFDFVANYVACGGATASKVIVGQILEHLISNS
DIPETENDFLPKVTANSVHSRKREKQVLSLLEVVPETHWNASSVLSMCEEAQFFQVCGLI
HSIRHQYASALDSYMKDIDEPIHGFAFINRTLLELNNYERTEFQAVVISRIPELFNLNRE
GTFFLVIDHFNNDASDILSQLRTHPRSLFLYLKTLIEVHLSGSLNFSCLRKDDIFGLNYS
TKGLDDYLRKLSDFPKYLSNNPVDVTDDIIELYVELLCQYERESVLKFLETFDSYRVEHC
LRLCQQYEVIDAAAFLLERVGDVGSALFLTLSSLDKKFNDLEAAVESIVANGASSGSNDP
RHFNSVLKLQEVNDIDVLLHACIGLCQRNTPRLNSEESETLWFKLLDSFCEPLIDSYNYR
TPAFGENQVQFLNESSGLQKDKEARIVTWRILKSDKAAHILKRLFSRFIKEIVEGMIGYV
HLPIIMSRLLSDNGSQEFGDFKLTVLGMLGTFGFERRILDTAKALIEDDTFYTMSLLKKG
ASHGYAPRNLVCCICNCLLIKSSSSYRVRVFNCGHATHLQCEVLDNEASGGDFSCPVCIH
SNQSQRPRGKALTEYSLVNTFSSGTQSLSGASVQYPQETDLLELPYTLQQIPRFEILTNL
QKNQRVIEIENVPQLRLAPPAVYHDKVTKGYHLLVGESSSGIEKQNKSKQLREVKVKRPS
SLRFPLKASLFGKERTTKS
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggagctgactgacaccggagtactgcctctaatggagctggacctgaatgct
ttcattcacgcacacctctccagcggcgacgacgacgacgatgacgacccctcatttcct
caccgtaccatagacgagattctaaaggaatctggttctccaccatcatctcctcctcat
tccccgccgtacggtggcgatcgcgccgttgccacaagggacggcaattcaactgttatg
gacgacacggatgctgattatcaggttgcatcaataaacgtcggagatggagtttgggcg
agagatagaattcgggatgatgtcccagataatgatgagtttcgtataactaaaggtctg
aaatgcgtagcagaacagaggtccgtggatgatgtgaatttcgacgagagcactacaatt
ctcccgccggtggaagctaacgatggaagcgtgtctgattatgctgaaaaaaatgtttgt
tcgacggaactacgcccatcaatcctggatgtcgatgaatcaaatgaaggggctattccg
agttcgtccgaacctgacaatgatggatctgctgtggactatgggagcctggagtgggaa
actcaagatttcaagaaatgtcttcaacagtcaaaagatacggaggtggatcttgtcatt
aaggatcccagtgttgtgaacgatatcagtgaattgggggagacaactgagcatatggac
gactcgacaattagtgaacaagcagaaatgatgctcctgccctccactaatccactcgaa
gcggctgaagaaattgaaaagaagcaggctttcactgctttgcattgggaagaaggcgtt
gctgctcaaccaatgaagctcgaaggtattaaggggggttcaactacattggggtacttc
gacattcaagctgacaatagtatttcaagaactatttcatcacattcattcaagcgtgag
catggttttccccaagtcttggctgttcatgctaattatattgcagttggaatgtcaaaa
ggcaatattgttgtggtggctagtaaatactcagctcaaaatggcgacaacatggatgcg
aagatgctactgcttggattacaaggagataaatcaactgcaccagtaacatctctttgc
tttaatctgcaaggggacctgctcctagctggttacaacgatggtcatattacagtctgg
gatgtgttgagggcatcagcagcaaaaatcatttcgggagaacacacatcaccagttgtt
cattcgttgttccttgggcaggatgctcaggttactcgacaatttaaagcagttactggt
gatagcaagggtctggttttgttacatacgttctcagtggttcctctgctaaatagattc
tccattaaaactcagtgtcttcttgatgggcaaaaaacggggactgttctatcagcttca
gcacttcttttgaatgaatcctgtggaagttctttgccaccaactcttgcaaacgtcgca
gtctcaaccagcagtattgggagcatgatgggaggggttgttggaggagattcaggctgg
aaactctttaatgaaggttcttctttggttgaagaaggtgtggtcatatttgctacccat
caaactgctctggtggtgaggctgagtcccactttggaagtgtatgctcagctctccaag
ccggatggtgttcgggaaggttctatgccttacactgcgtggaaatgctcacagtctttt
gaaacttcaccttctgaggcagtagaaagggtttctttgcttgcaattgcctgggataaa
atggttcaagtagcaaagttggtgaaggcagagcttaaagtatgtggcaagtggtccctt
gagagtgcagccataggtgtggcatggttagatgaccaggttcttgtcgttctcacaata
acaggacaactctttttgtttgagaaggatggaactatgattcaccagacaagtgttttt
gtagatgggtttgataaggaagatttcattgcatatcacacccactttgtgaatgttttg
ggcaatcctgagaaggcatatcacaattgtgttgctgttagaggagcttctgtatatgta
ttgggacctatgcatcttattatttcccgtctccttccatggaaggagcgggttcaggtt
ctaaggaaagcaggagactggatgggtgcccttagcatggcaataaccatttatgatggc
caagctcatggtgttattgatctccctagatcgttggagtctttgcaggagttggtagtg
ccctttctgattgagttgctgttatcgtacgtggatgaagtgttttcatatatatcagtg
gcattttgtaaccaaattgaaaagaatgaaaaatcggttgatgtaactagtggaggccat
tctgcacattctgaaataaaagagcaatataatcgtgttggtggagttgcagttgagttt
tgtgtccatatcaggaggacagatattctctttgatgaaattttctccaaatttgtggcc
gttcaacagagagatacatttttggagcttctggaaccatatatattaaaggacatgctt
ggatcgctgcccccggagattatgcaagctttggtagaacattatagccacaaaggatgg
ttgcagcgtgtagaacaatgcgttcttcacatggatatttcttccttagattttaatcag
gttgttaggttatgccgggatcatggattgtatagtgcactggtgtaccttttcaacaag
ggattggatgatttcaggacaccattagaggagctgttggcagtgttacagaccagtaaa
agtgaacgtgcttctgccatagggtataagacacttgtttatctgaaatattgcttttca
ggacttgcttttccaccaggccaaggaactcttgctcattcgcgcgtgcaatctcttaga
gatgaactgctacaatttttgttggagaattctgattcagtggatacaagatcaatttca
aataaatcatctgaaattggatatctaaagctataccatctcttagagttagacactgga
gctactttagatgttttgagatgtgcttttgttgaaggtgaaattcccaaaaccaattct
tctccgaatggtttagatgatgtaagtatgcaggtgcaagaagaaaagaactcaacttct
ggaagaaagaacgttctaattcaaagtatagtagatgctcttgttcatgttctcgatcaa
gctatctgtcaaacagataggtctgcaggtggcgaagacattgcactggttggagactgg
ccatcgaagaaggacttagttcatttgtttgactttgttgcaaattatgttgcatgtgga
ggggctactgcctctaaagtcatagttggtcagattttggaacacttgatatccaatagt
gatattccagaaacagagaatgattttctacctaaggttactgcaaatagtgtacattct
agaaaaagagaaaagcaagtgctttccctcttggaggtggtacctgagacccactggaat
gcgtcttctgtgttaagcatgtgtgaggaagcacaatttttccaggtttgtggtctaatt
cacagcatcagacaccagtatgcatccgctctggatagctacatgaaagatatagatgaa
cccattcatggctttgcctttatcaatagaacattactggagctgaacaattatgaacgg
actgaatttcaggccgtggtcatttctcgaattccagagctttttaacttgaacagagag
ggaacgttcttcttggtcattgaccatttcaacaatgatgcttcagacattctttcgcag
ctccgcactcatccaagaagcctatttctgtacttgaaaactctcattgaggttcaccta
tctggaagcctgaacttctcttgcttaaggaaagatgatatttttgggctcaactattca
actaaaggactggatgattacttgcgaaagctctctgatttccctaaatatttgtctaac
aatcctgttgatgtgactgacgatataattgagctttatgtggagctactttgtcagtat
gaacgtgaatcggttctcaagtttctggagacttttgatagctaccgcgtggagcactgt
ttacgtctctgccaacaatatgaggttattgatgctgcagcgttcttattggagagggtt
ggtgatgttggtagtgctcttttcttaacactgtctagccttgacaaaaaatttaatgac
ctagaggctgctgtggaaagcatagttgctaatggtgcttcaagtggttctaatgatcca
cgacatttcaactctgttttaaaattgcaagaggtgaatgatatagatgttttattgcat
gcctgtattggactgtgccagcgaaatactcctcgtttgaactctgaggagtcagagaca
ctttggttcaaattacttgactcgttttgtgagcctttaattgattcatataattataga
actcctgcttttggagaaaatcaagttcaattcttaaacgagtcatcaggtttgcaaaag
gataaagaggcacgcatagttacatggagaatcttgaagtccgataaagctgctcatata
ttaaagagactgttctctcgttttatcaaagagatagttgaggggatgataggatatgtt
catcttccaattatcatgtccagactcctctctgacaacggtagtcaagaatttggtgat
tttaaactcactgtacttgggatgcttgggacatttggctttgaaagaagaattctggat
actgccaaagctttgatagaggatgacacgttctacaccatgagcttactaaagaaaggg
gcatctcatggatacgctccccggaatcttgtctgttgcatatgtaattgccttcttatc
aaaagttcatcaagttacagagtacgagtttttaactgtggtcatgcaactcatcttcaa
tgcgaagttcttgataatgaggcttcaggtggtgacttctcatgccctgtatgtatccat
agcaatcaatctcaacggcctagaggcaaagcactcacggagtacagtttagtgaataca
ttttcatcaggaactcaatcattgtcaggagcttccgttcaatatccacaggaaacagat
ttattggagctcccgtacactcttcagcagataccacggtttgagatcctgactaactta
cagaaaaaccagagagtaatagagatagaaaatgtgcctcagctgaggcttgcaccacca
gccgtctaccatgacaaggtcacaaaagggtatcatcttttagtaggagaaagtagcagt
ggaatagaaaaacaaaataagagcaagcaactcagggaagtaaaagtgaagagaccgtcc
tctcttcgattccctctaaaagcaagtttatttggaaaagagaggactacgaaatcttga
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integrated database retrieval system
