Momordica charantia (bitter melon): 111014848
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Entry
111014848 CDS
T05045
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03030
DNA replication
mcha03420
Nucleotide excision repair
mcha03430
Mismatch repair
mcha03440
Homologous recombination
mcha03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111014848
03420 Nucleotide excision repair
111014848
03430 Mismatch repair
111014848
03440 Homologous recombination
111014848
03460 Fanconi anemia pathway
111014848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcha03000
]
111014848
03032 DNA replication proteins [BR:
mcha03032
]
111014848
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111014848
Transcription factors [BR:
mcha03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111014848
DNA replication proteins [BR:
mcha03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111014848
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111014848
MMR (mismatch excision repair)
111014848
DSBR (double strand breaks repair)
HR (homologous recombination)
111014848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
zf-CCHC_3
DUF223
CDC24_OB3
DCA16
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
111014848
NCBI-ProteinID:
XP_022145391
UniProt:
A0A6J1CW66
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MAALMAPYKLTDGAVMVICKREPTAEMFQPIVQVFELKLVNTSQQSGNERYRLLLSDGTH
FQQGMLGTQLNGLVKSGKLQKGSVVHLKQYVCNPVQDRLIIIVIKLDVLVDVCEIIGEPV
QATRSVIAGASGNPQSSVGPSPNGGMVGKTNVSGVSFEQPNVIQSHVGSFSNNPESGRYT
ASIAPPLYSNMDPGTRFNGPSSLSGSYGDQKMAYQNNESDIPRPPLNAYSRPQPTYQQPP
PMYSNRGPVAKNEATPRIMPIAALNPYQGRWTIKARVTSKKELKHYNNPRGEGKVFSFDL
LDSYGGEIRVTCFNTVADQFYNQIESGKIYFISNGTLKPAQKNFNHLKNDLEIFLESTST
LQPCFEDDQSIPQQQFHFRQISEIEGMDSNTVVDVIGVVSSINPSTSLMRKNGIETQKRS
LQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTISTS
QLFVEPDFPEARRLRDWFEKEGRSTPSVSLSREVSTVGRTDVRKTISQIKDERLGTSEKP
DWITVSATVSFIKVDSFCYTACPILIGDRQCNKKVANNGDGKWRCDRCDQSVEECDYRYI
LQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYFLKYEEQDDEKFAEIIRKVLFTKFIMK
LKIKEETFSDESRVKSTVVKADSVNFSTESRFLLDLMEKHRAENPSSITPKAEPGLHNPG
AVNVGGGQFVSPIRNSSNVGREYGTPNQGIQLGNQYNSSRLTPSMPLNSNMYCNSCGSSG
HSSMNCPSIMSGPTHPVGGGMYSNRASGPTGGASGECFKCHQTGHWARDCPGLASVPPAY
GSSGFTAR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttaatggcgccgtataagctgacggacggagcagtgatggtgatctgcaag
agggagccgacagcagagatgttccagccgattgttcaagtatttgagttgaaattggtt
aacacttcgcagcagtcaggcaacgagaggtatagattgttgctttctgatggaacccat
ttccaacaaggaatgctgggcactcagctcaatggattggttaaatctgggaagttacag
aaaggttctgtcgttcatttgaagcagtatgtttgtaaccccgttcaagatcgcctgatt
ataattgtcatcaagttggatgttctagtggatgtgtgtgaaattattggcgagcctgta
caagcaacgaggtcagtaatagcaggtgcaagtggaaatccccaatcctctgtgggtcct
tcacccaacggtggaatggttggtaagacgaatgtatctggtgtgtcttttgaacagccc
aacgtgattcaatcgcatgtgggctctttttctaacaatcctgagtctggaagatacact
gcatcaattgcacctcctctttactctaatatggatcctggaacaaggtttaacgggcca
tcttctttaagtgggtcatatggtgatcagaagatggcatatcaaaacaatgaatcagat
attccaaggcctcctctaaatgcttattcccgtcctcagccaacatatcagcagccacct
ccaatgtacagtaatagaggaccagtagcaaaaaacgaagctaccccaaggataatgcct
attgctgctctgaacccttaccaaggaaggtggacaataaaggctcgagttacatcaaaa
aaagaacttaagcactacaataatcctcgtggggaggggaaagtgttttcatttgatctt
cttgattcctatggtggagaaatacgggtaacatgcttcaatacagtagccgatcagttt
tacaaccagatcgaatctggtaaaatctacttcatttctaatggaactttgaaacctgct
caaaagaactttaatcatctaaaaaacgacttagaaatatttcttgagagcacatcaaca
ctccaaccttgctttgaggatgaccaatcaatcccccaacaacagttccatttccgtcag
attagtgagattgaaggcatggacagcaacactgttgtagatgtaattggtgttgtttcc
tccattaatccttcaacttctttaatgagaaaaaatggtattgagactcagaagagatcc
cttcagttgaaggatatgtctggccgaagtgttgagttaactctgtggggaaacttctgt
caagcagaagggcaaagattgcagaatatgtgtgactcggggctgttcccagttttggct
gtgaaatctagtagagtgagcgacttcaatgggaaggcagtggggaccatttcaaccagt
cagctttttgttgagccagactttcccgaggctcgtaggctgagggactggtttgagaag
gaagggaggagtactccttctgtctctttatcgagggaagtttctactgtgggcaggacc
gatgtccgtaagaccatatctcaaatcaaagatgagaggttaggaacctctgagaagcca
gattggattactgttagtgcaactgtttcattcatcaaggtcgacagcttctgttacacg
gcatgtcctatcctgattggggaccgacaatgcaacaaaaaggttgcgaataatggagat
ggaaaatggagatgtgataggtgtgatcagtccgttgaggaatgtgactacaggtacata
ctccagctacaaatacaggaccatactggcttaacttgggtaactgcatttcaagaaggc
ggtgaggagatcatgggcatacctgcaaaaagactgtattttttgaaatacgaagagcaa
gatgatgagaaatttgcagaaatcatccgtaaggtcctctttacaaaattcattatgaag
ttgaaaataaaggaagagactttcagtgatgaatcgcgagtaaagtcaacagtggtgaaa
gcagatagtgtaaatttttcaacagagtccaggtttctcctagatttgatggaaaagcat
agggcagagaaccctagttctattaccccaaaggcagaacccggacttcacaaccctgga
gcagtgaatgttggcggtggacagttcgtgtcacccattcgaaatagtagcaatgttggc
agagaatatggtactccaaaccaaggtattcagctcgggaaccagtacaacagttctagg
ctcactccatccatgccgcttaactcgaacatgtactgcaacagctgcgggagctccggt
cacagctctatgaactgcccgagtatcatgagcggtcctacgcatcccgttggagggggg
atgtattcaaatagagcttctggccctactggtggtgcctctggtgaatgcttcaaatgc
catcagacagggcactgggctagggattgccctggtttggcctctgtccctcccgcttat
ggtagcagtggattcacagccaggtga
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integrated database retrieval system
