Momordica charantia (bitter melon): 111015060
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Entry
111015060 CDS
T05045
Name
(RefSeq) transcription factor bHLH140
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111015060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111015060
Enzymes [BR:
mcha01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
111015060
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
111015060
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
111015060
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
111015060
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
111015060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
AAA_33
Macro
zf-C2HE
HIT
AAA_18
Zeta_toxin
nSTAND3
AAA
ABC_tran
CPT
AAA_22
Motif
Other DBs
NCBI-GeneID:
111015060
NCBI-ProteinID:
XP_022145665
UniProt:
A0A6J1CV45
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MDMDIDDNSTAKGKEGQEKLIMVILVGAPGSGKSTFCELVMGSSSRPWARICQDTIGNGK
SGTKAQCLKSASSALSDGKSIFVDRCNLEIEQRADFVKIGGSGVDVHAVVLDLPAQLCIS
RSVKRTGHEGNLQGGKAAAVVNKMLQKKELPKLNEGFTRITFCHNETDVQSAIDTYKSLG
LHDTLPHGCFGQNKSDNKVQLGIMKFLKKADNPAKTCSSANAIKDSPNLQTSRENSYSCD
KKEEPACTIRGNVDKESEKGENPGVRSLGDSISRSDPPTLAFPSISTSDFKFSHEKAAEI
IVETVEEFMDKLGNARLVLVDLTYGSKMLSLVKAKAAKKKINCSKFFTFVGDITKLNSEG
GLRCNVIANAANWRLKPGAGGVNAAIFSAAGPGLEVATKQQANSLRPGNTVVAQLPSTSP
LFNREGVTHVIHVLGPNMNPQRPNYLNNDYDEGCKLLRAAYSSLFQGFISIVENQFKSVK
GIQKHLGSAPSESEKHSEDSPRSTFPSCDHKFKREDVQNPERSKKWKGSQDSAEAFNQNN
NTIVHKMSKHWGSWAQALYNTAMHPERHGDTVLELSDDVAVLNDIYAKAHKHLLVVARYE
GLDQLADVRREHLPLLRTMHDVGLKWIDKFFHEDASLVFRLGYHSAPSMRQLHLHVISQD
FDSSHLKNKKHWNSFNTDFFRDSVDVMDEVGSHGKASIKDDESLMSMELRCNRCRSAHPN
LLKLKAHISKCRAPFPSTLLEGSRLVIAPSNTHDSLS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggacatggatatcgacgataattcgaccgccaaaggaaaggaagggcaagagaagctc
ataatggtgatattagttggtgcaccaggaagcggcaagtccaccttctgcgaactcgta
atgggttcctcttctcgcccgtgggctcgaatttgccaggacaccattggaaatggcaag
tctggaaccaaagcacagtgcttgaagagcgcatcaagtgcattgagtgatggaaagagt
atatttgtggacaggtgcaatcttgaaatagagcagcgtgcagattttgtaaaaattggc
ggctctggagtggatgtacatgctgttgtactagatcttcctgcacagctctgtatctct
cgttcagttaagcggaccggtcatgaagggaatttacaaggaggaaaagctgctgctgtt
gtgaataaaatgctgcaaaagaaggaattacccaagttaaatgaagggtttactcgcata
acgttttgtcacaatgagaccgatgttcaatctgctatagatacgtacaaatcacttggt
ttacatgatacgcttccacatggatgttttggacaaaataaatcagacaataaagtacaa
cttggcataatgaagttcttaaagaaagcagacaatcctgctaagacatgttctagtgcc
aatgccattaaggattctccaaatctgcaaacttcccgggaaaatagctactcttgtgat
aaaaaggaagagcctgcctgcacaataaggggcaatgtcgataaagagtcagagaaaggc
gaaaatccaggtgtaagatcgttaggagacagtatttctcgaagtgatcctccaaccctt
gcatttccgtcaatttcgacatcggatttcaagttcagccatgaaaaggctgctgaaatt
attgttgagacggttgaggaattcatggataagcttggaaatgccagacttgttttagta
gacttgacttatgggtcaaagatgttgtctttggttaaagctaaagcagccaagaaaaag
attaattgctccaagttttttacattcgttggagatataactaaactcaattcagaaggt
ggattgcgctgcaatgttatagccaatgctgcaaactggcgactgaaaccgggggctggt
ggtgtcaatgctgcaatttttagtgctgcaggtccgggtctggaagtggcaactaaacaa
caagcgaactcccttcgacccggcaataccgtcgttgctcaattgccctcaacttctcct
ttgtttaatagggaaggagtaacccatgtcatacatgttcttggaccaaacatgaatcca
cagaggccaaattatctcaacaatgactatgatgaaggttgcaaacttctccgtgccgct
tactcttccctatttcaaggttttatttcaatagtagaaaaccaatttaagtcggtgaag
ggaattcagaaacaccttggctcggcgccttcagaatcagaaaagcactccgaggacagc
ccaagaagtactttcccgagttgcgatcacaagtttaagagagaggatgtgcagaatcct
gaaagaagcaaaaagtggaaaggatctcaggattcagctgaagcattcaaccaaaataac
aatacgattgtccacaaaatgagtaagcactggggatcatgggcacaagcactctacaat
actgcaatgcatcctgagagacatggcgatacagtactggagttatcagatgatgttgca
gtactgaatgatatctatgcaaaggcacataagcatcttctggtagtggctcggtatgaa
ggcctcgatcaactagccgatgtacggagagaacaccttccattgttgagaacgatgcac
gatgtgggtttgaagtggatagataagttctttcatgaagatgcatcattagtttttcgc
ctcggataccactcggctccatccatgaggcagctgcacctacatgttataagccaggat
ttcgactcaagtcatctgaagaacaagaagcattggaattctttcaacaccgatttcttc
agagactcggtagacgttatggacgaagtcggtagccatggaaaggcaagcatcaaggac
gacgagagcttgatgtctatggagttgcgttgcaaccgatgcagaagtgcacatcccaac
ttactcaaattgaaagcacatatttcaaaatgtcgagcgcctttcccttccacactactc
gagggcagtcgtttagtgattgcaccaagtaatactcatgactctctatcgtag
DBGET
integrated database retrieval system