Momordica charantia (bitter melon): 111015525
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Entry
111015525 CDS
T05045
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcha03009
]
111015525
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111015525
Ribosome biogenesis [BR:
mcha03009
]
Eukaryotic type
90S particles
Helicases
111015525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
nSTAND3
ATPase
AAA_19
PhoH
AAA_23
HTH_ABP1_N
Motif
Other DBs
NCBI-GeneID:
111015525
NCBI-ProteinID:
XP_022146279
UniProt:
A0A6J1CWX8
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MGDFIDDQLDCGKGSWSLDSGGSNQVILQGSKKNNIKRKNTNKGCKKIQINKKPKLSKSQ
KRKIMKLEEDKEKTLLLSKSLETLEKYKIPDDAFLLLRSSVSIGQDETRLEKRSRDIQFS
KVGIEVSRNDQQLNKACTYIARHENHLESPDISSRHQLYIKIDEDHPLTEEGEVSLQDNG
TIVPKQGEVFSSLPDEVENVSTVMLEDERGLSCITCIDGGLKKPEMMDKEDEIPKVETCT
TTSNPLPERRFSRPIVVPVLRPHEIEDKRKDLPIVMMEQEIMEAINENPIVIICGETGCG
KTTQVPQFLYEAGFASLQSSLQRGTIGVTQPRRVAVLATAKRVAYELGVHLGKEVGFQVR
YDKKIGDSCSIKFMTDGILLREVQNDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKL
RQDLHMKQQQMILSGKRISPEDMIFPLKLVLMSATLRVEDFISGGRLFHVAPPIIEVPTR
QYPVTVHFSRRTETVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKKLREASKK
LIKKTYEKDVGNNNGAVEMNSTQNLDMKEINEAFEDHEFSIGEQADRFSSYDKDEFDIND
DVFDVSYDSETDSELEFNENDAMFDEDDGNLTDVLREDVSLTSLKAAFDALDGKTVSNYD
GIQIDHTTEEESSSERCVARTKENCEHGFFVGALHVLPLYAMLPAVSQLRVFEEVKEGER
LVVIATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGR
TGPGHCYRLYSSAVFSNIFPEFSLAEIARIPVDGVVLLMKSMGIDKVVNFPFPTPPETSA
VLEAESCLKALEALDSGGRLTPLGKTMARYPLSPRHSRMLLTVIKIMRNSKNTARANLVL
AYSVAAAAALSMSNPFVMMFEGSQMKDDLQQNDGENVEKSLEKKLKEAGKLSREKFSNPS
SDALTVAYALQCFELSERPVEFCNCYTLHLKTMQEMSKLRKQLLQLVFNHSGVSIAELDF
SWTNGTLEDVNNVWDVPYSKHPLSLNEEEIICQAICAGWPDRVAKRIRDISKTAEGDRKE
RAGKYQACMVKENVFLHRWSSVSRSAPEFLVYNELLLTKRPYMHGVTCVKPDWLVKYASS
LCTFSAPLTDPRPYYEPQNDMVFSWVAPTFGPHLWKLPLHSMPIKDIVHGVAVFACALLE
GNVVQCLKSVRKFMAAPPSSVLRPEALGQKRVGNLLSRLKSKKINTCATLREVWKENPYE
LHSEIMDWFQESFQSSQFKEVWSHMVSEVLEPQKHFSKGLKRVSKKKLKPE
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgggagactttatcgatgatcagctagattgtggaaaagggtcgtggagtttggatagt
ggtggtagcaatcaagtcatcttgcagggaagtaagaagaataatataaagcggaaaaac
acgaataagggatgtaaaaagattcagataaataaaaaaccaaagttgagcaagtcacag
aaaagaaagattatgaagttggaggaggacaaagaaaaaacacttttactgtcaaaaagc
ctggaaactttggagaaatataagattccagatgacgcatttcttcttttacgatcttct
gttagtattggccaggatgaaacaagattggaaaaacgtagcagagacatacaattttct
aaagtaggaatagaggtttccaggaatgaccagcagttgaacaaagcctgcacttacatt
gctcgacatgaaaatcatcttgaatctcctgatatttcttcacggcatcaactttatatc
aagattgatgaagatcatcctttgacagaagaaggagaagtttccttacaagataatggt
actatagtccctaagcaaggcgaagttttttcttcattgccagatgaagttgaaaatgtt
agtacagttatgctagaagatgaaagaggtttatcatgtattacgtgcatagatggtggc
ctaaaaaaacctgagatgatggataaggaggatgaaatcccaaaggtagaaacatgtaca
acaacatctaacccgcttccagaaaggcgtttttctaggccaattgtggtgcccgtactg
aggccacatgaaattgaagataagaggaaagatcttccaatagtcatgatggagcaagag
ataatggaagcgatcaatgagaatcccatagttataatatgtggagagactggttgtggc
aaaacaactcaagttcctcagtttctatatgaggctggctttgcttcattacaatctagt
cttcagagaggtaccattggggtgactcaacctcgacgtgttgctgttcttgccactgct
aagcgtgttgcatatgagcttggtgttcatctagggaaagaggttggattccaagtgagg
tatgacaagaaaattggagatagttgctcaataaagttcatgactgatggaattttactt
cgtgaagttcagaatgattttttactgaagcgttactctgttctaattcttgatgaggct
cacgagagaagcatgaatactgacatattgattggaatgctgtcacgtgttgttaagctt
cgccaggatttgcacatgaagcaacaacagatgatactttcaggaaaaagaattagtcct
gaggacatgatttttccattaaagttggttcttatgagtgctaccttgcgagtggaagat
ttcatttctgggggaagattgtttcatgttgcacctcccattatagaagttcccactaga
caatatccggtaactgtgcatttttctaggagaacagagacggtagattatattggtcag
gcatataaaaaggttctggcaattcacaaaaagctgccaccgggaggtatactcgtcttt
gttactggacagagagaggttgagaatttgtgcaagaagctacgtgaagcctcaaagaag
ctgataaagaaaacatatgaaaaagatgttggaaataacaatggtgctgttgaaatgaat
tccactcagaatttggatatgaaggagatcaatgaagcatttgaagatcatgaattttca
ataggtgaacaggcagatcggtttagctcttatgataaggatgagtttgatataaatgat
gatgtgtttgatgtttcatacgattcagaaacagacagtgaattggaattcaatgaaaat
gatgcaatgtttgatgaagatgatggtaacctaactgatgttttaagagaagatgtaagt
ctcacctctctcaaggctgcatttgatgctttagatggaaaaactgtttcaaactatgat
ggaatacagattgatcacactacagaagaggaatcatcatctgaacgatgtgttgcgagg
accaaagaaaactgtgaacatggtttctttgttggtgcgttgcatgttcttcctctctat
gccatgctacctgcagtatctcaattgcgtgtgtttgaagaagtcaaggaaggagagcga
cttgtcgttattgctactaatgtagctgaaacttcgttgaccatcccaggcataaaatat
gttgtggatactggtagagagaaggtgaaaacatataactcctcaaatggaattgaaaat
tatgaagtgcagtggattagcaaggcatcagctgctcaacgtgctggaagagccggaagg
actgggcctgggcattgttatcgtctctattcttctgccgtttttagtaatatatttcct
gaattttctcttgctgaaatagctagaataccagttgatggtgttgttcttctcatgaaa
tcaatgggtattgataaggttgttaattttccatttcccactcctcctgagacctctgca
gtacttgaggctgagagttgtttgaaagctcttgaagctcttgatagtggtggcagattg
acacccttggggaagacaatggctcgttatcctttaagtccacgccactctaggatgcta
cttacggttattaagattatgaggaattcgaaaaatactgctcgtgcaaatcttgttctt
gcatattctgttgcagcagctgcagctttgagcatgtctaatccttttgtcatgatgttt
gaaggaagtcaaatgaaggatgatttacaacaaaatgatggggaaaatgtggaaaaatca
ttggaaaagaagctaaaagaagctggtaaactctcccgtgaaaaattttcaaatcctagc
agtgatgctttgacagtagcttacgcattgcagtgttttgaactttctgaacgtcctgtg
gaattctgtaattgctacacattacatctaaaaactatgcaagaaatgtccaagttgagg
aaacaactattgcaacttgttttcaatcatagtggtgtttctattgctgagttggacttt
tcatggactaatgggactttggaggatgtaaacaatgtgtgggatgtcccatacagtaag
catcctctttcattgaacgaggaagagataatttgccaagcaatctgtgcgggttggcca
gacagggttgccaaacgtattagagacatttctaagacagctgaaggtgatagaaaagaa
cgtgctggaaagtatcaagcttgcatggtaaaagaaaatgtgttccttcaccgatggtca
tcggtttctcgttcagccccagaattcttggtgtacaatgaactgttacttacgaagcga
ccgtacatgcatggagtgacttgtgtaaaaccagattggcttgttaaatatgccagttcc
ttgtgtactttctcagcacctctaacagatcctagaccttattacgaacctcaaaatgat
atggtattttcatgggttgctcctacattcggccctcatctatggaagcttcctttacac
agtatgccaataaaagatattgtgcatggagttgcagtgtttgcatgtgctttgcttgaa
gggaatgtggtgcaatgcttaaagtcggtgcgcaagttcatggcagcccctcccagtagt
gtcttaaggccagaggcattaggtcaaaaaagagttggtaatcttctctctaggttgaaa
tctaagaagataaacacttgtgctacactgagagaggtttggaaggaaaatccttatgaa
ctacattcagaaatcatggattggtttcaagagagttttcaaagtagtcagtttaaagag
gtttggtcacacatggtttctgaagtacttgagccccaaaaacatttctccaagggactg
aaaagggtcagcaagaaaaaattgaaacctgagtaa
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