KEGG   Momordica charantia (bitter melon): 111015618
Entry
111015618         CDS       T05045                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111015618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcha03021]
    111015618
Enzymes [BR:mcha01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     111015618
Transcription machinery [BR:mcha03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     111015618
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5
Other DBs
NCBI-GeneID: 111015618
NCBI-ProteinID: XP_022146394
UniProt: A0A6J1CY08
LinkDB
Position
Unknown
AA seq 1975 aa
MEDAPCCSPILDGEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCES
CGTSEPGKCEGHFGYIELPIPIFHPNHITELKKMLSLLCLKCLKMKKNKFPSKNIGFAER
LLSSCCEDASQVSIREMKKADGASYLQLKVPSRTPLREGFWDFLERYGFRYGDNLTRTLL
PCEVKEMLKKIPNEARKKLAGKGYYPQDGYILQYLPVPPNCLSVPEISDGVTIMSSDPAV
SMLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARYGVN
KELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVS
VHNINYLQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPP
TTHKHSLQALRVYLHDDHTVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVE
KQLLSSHSGNLNLQLGTDSLLSLKMMFRTYFLGKAAAQQLAMFVSSSLPSPAILGARSDS
PHWTALQILQTVLPAYFDCHGDSYLIKNSDFLKFDFDRDAMPSLINEIVTSIFFQNGPEE
VLRFFDSLQPLLMEHIFSEGFSVGLDDYSMPMALLQALQKNIQVISPLLYQLRSTFNELV
ELQLENHIRSVKVPFTNFILKLSSLGKLFDSKSDSAINKVVQQIGFLGLQLSDKGKFYSK
TLIEDVASLFHNRYVSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGL
TEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGVKAGMMKPHNLFPPGEPVGVL
AATAMSNPAYKAVLDSTPSSTSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCACGRKHC
NENAAYLVKSHLKKVTLKDATVDFMIEYNRQLTLSGFGPGLVGHVHLNKMLLKELKINMA
DVSRRCEETISSFRKKKKKKFAHALRFSFSENCSFHQSNGEDSTDMPCLIFWHETRDSHL
ERTAHIFADIVFPLLSETIIKGDPRISAANVIWISPDSTSWQRNPSRWQDGELALDICLE
KSAVKQNGDAWRNVMDCCLPVIHLIDTRRSIPYAIKQVQELLGISCAFDQTVQRLAKSVS
MVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQVPFTEATLFTPRRCFERA
AEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQDDVLDVYNFLHMVRSAK
SEEFTSACLGEEIEDLMVEDEYRELTLSPEPFSTSEKPVFEDSAEFENCLDNYPGESKWE
KAPPSGAGSTGSGQWENNENTKATNSSNDHDWSGWGRKVEPDVVTTKAQENTSKSGWDST
PSWGNKATNTTTNDNDWSNSATKEVEPDSFNSMENTPKSGGWDTAATWGTKAKDVDNFKG
ETEPEKANVWSGWQNDKAETQDAFIKKINSRSCGSEDKAWSTGTSKTYDNWSNQVKDKAE
SCQVQVQEVPSKTNGWDSAGGWQKNSGDADQSEACRNDDQASMDLETVADRWGSRATQRK
DSKDNFPSKAVEHGDSPLINHSWNQHKSSEVFRGESGNDFWGQRKSQDVIKPSQGWGSQV
KSNEGSSQNTQVERLWSSQNESDQVASEHKSSDSRGWDSQEKLNKPWDKQKSLEASQSWS
SQNDSMGSWGQLQRESEEFSQGSQDDSNKQFSQVQKSPEVSHGWGSHKESSELTTSHGWG
SHKESSELATSHGWGSHKESSELTTSHAWEKKNQGSKGWGANVGEWKNRKNRPPKSPGIL
NDDAGLRAIYTASGQRLDMFTTEEQDILADIEPIMQSIRKIMHQSGYNDGDPLSAEDQSF
ILQNVFNFHPDKAVKMGAGIDHFMVSRHSSFQESRCFYVVSTDGHKEDFSYRKCLDNFVK
GKYPDIAEPFVAKYFRKPRSGKPRDRNSASEENENKNVGKELTPIPEETENGNQQ
NT seq 5928 nt   +upstreamnt  +downstreamnt
atggaggatgcaccatgttgctcacctattttagatggagaaatagttggaataagattt
tccttggcaaatggtcaagaaatttgtattgcagccatcagtgactgccctattacccat
gctagtcagctctctaacccattccttggtcttccaattgaatttggaaaatgtgaatct
tgtggtacttcggaacctgggaagtgtgaaggccactttggatatattgaattaccaatt
cccattttccatcccaatcacattactgaactgaaaaagatgttgagcttgctgtgtttg
aaatgcttaaaaatgaaaaaaaacaagtttccttcaaagaatattggttttgcggaaaga
ttgttatcctcatgttgtgaggatgcctcacaagtttctattcgagagatgaaaaaagca
gatggtgctagttacttgcaattaaaagtaccatctaggacaccactgcgggaaggattt
tgggactttctagaaagatatggtttccgttatggtgataatctcactcgaactttgctc
ccttgcgaggtgaaggaaatgctcaaaaaaattcccaatgaggccagaaagaaacttgct
gggaaaggatattatcctcaggatggatatatcttgcaatatttaccagtccctcccaac
tgtctgtccgtaccagaaatttctgatggtgttactatcatgtcttcggatccagctgtt
tcaatgctcaagaaaattcttaagcaagtggaaatcatcaagggttcgaggtctggcgcg
ccaaattttgaatctcatgaagtagaagctaatgacttgcaattggctgttgatcaatat
cttcaagttagggggactgttaaggcatctcgtggcatagatgcacgttatggtgtaaat
aaagagttaaatgatccttccacgaaagcgtggcttgagaaaatgagaactttatttatt
cggaaggggtctggtttctcttctcgcagtgtgattactggagatgcttacaaactagtt
aatgaaattggcgtgccttttgaagttgcgcagaggatcacttttgaggagagggttagt
gtgcataacataaactatttacaggaactggtggataagaagttatgtttaacctacaga
gatggttcttctgcctattcacttcgtgaaggttcaatgggccatacatatctgaaacct
ggtcaaatagttcatcggcggatcatggatggagacattgttttcattaatcggccaccg
actactcataaacattctttacaagccctgagggtgtatctgcacgatgaccatacagtc
aagatcaaccctctaatatgtggacccttgagtgcggattttgatggtgattgtattcac
ctattttatccccagtccattgcagcaaaagctgaggtgttgggacttttctctgtggaa
aaacagctgcttagctctcatagtgggaatcttaatttgcagttgggtactgattcattg
ttgtctctcaagatgatgttcagaacatatttcttgggcaaagcagcagcacagcaactg
gcgatgtttgtttcttcatctctgccatcacccgccattttgggagctcgttctgatagt
cctcattggactgctttgcagatactgcaaactgtgttgcctgcttattttgactgccat
ggagatagttacttgataaagaacagtgatttcctcaagtttgacttcgatagagatgct
atgccatcattaatcaatgaaattgtgacatcaatcttttttcagaatggtcctgaagag
gttctgagattttttgattctttacagccactattgatggagcatatcttttcagaaggt
ttcagtgttggattggatgattattccatgcccatggcacttttacaagctcttcaaaag
aatattcaagtaatatcacctttgctgtatcagttaaggtcaacgttcaatgagctggtg
gagttgcagttagagaatcacattcgatccgtcaaagttccatttacaaactttatctta
aagttatcttcattaggaaaattatttgactccaaaagtgattcagctattaacaaggtg
gttcaacaaattggatttcttggattgcagctttctgacaagggaaaattttattccaag
acattgatcgaggatgtagcctctctgtttcacaatagatatgtttctgataaaattgac
tatccttctgctgaatttggattagtcaaaggctgttttttccatggtttagatccgtat
gaagaaatggtccattcaatttctacaagagaggtaatggttcgatcatcaagagggctt
actgaacctggaacccttttcaagaacttgatggccatccttcgagacgttgttatttgt
tatgatggtactgtaaggaacgtttgtagcaattccatcatacaacttgaatatggagta
aaggctggaatgatgaagcctcataatttatttcctcctggtgaaccggttggggttcta
gcagctactgccatgtcaaatcctgcttataaggcagttcttgattctactcctagcagc
acttcatcttgggacatgatgaaggaaattcttctttgcaaggtcagttttaagaatgag
cctatagatcgtcgggtgatattatatttaaataattgtgcttgtgggaggaaacattgc
aatgaaaatgcagcatatttggttaagagtcaccttaagaaagttacacttaaagatgcg
actgttgacttcatgatagaatataaccgacaactgactctgtcagggtttggtcctggg
cttgttggtcatgtgcatctaaacaagatgctactgaaagagttgaagataaacatggct
gatgtttcacgaagatgtgaagagactatcagttcctttaggaagaagaagaagaagaaa
tttgctcatgcattaagattctctttcagtgaaaactgctcttttcatcaatcgaatgga
gaagatagtactgatatgccgtgtttaatattctggcatgagacaagagattctcatttg
gagagaaccgcacacatctttgctgacatagtatttccattgctgtcagagacgatcatc
aaaggtgaccctcggattagtgctgcaaatgtgatctggattagtccagattcaacaagc
tggcaaagaaatccttccaggtggcaggatggtgaattggccttggatatctgtctggaa
aaatcggccgtaaaacaaaatggtgatgcttggaggaatgtgatggactgttgccttccc
gttattcatttgattgatactagacgatctattccatatgcaattaaacaagttcaggaa
ctgcttggcatttcatgtgcttttgatcaaacggttcagcgccttgcgaagtcagtgtca
atggtttcaaaaggtgttcttggagatcatcttattcttctggcaaacagtatgacatgc
acaggaaatatgattggcttcaattcaggtggatataaagcattatctcgtgcattgaat
atccaagtaccatttacagaagcaactctgtttacaccaagaaggtgctttgagagagct
gctgagaaatgtcataaggattctttatcaagcatagtggcctcctgttcatggggtaag
catgttgctgttggtacaggatcaaggtttgacatcctctgggaccaaaaagagttaggg
tgcaaacaagatgatgttttagatgtttataacttcttacacatggtgagaagtgccaaa
tccgaagaatttacgtctgcatgcctaggtgaagagattgaggatctaatggtagaagat
gaatatagggagttgactctgtctccagagcctttctctacttctgagaagccagttttt
gaagacagtgctgaatttgaaaactgtttggataattatcctggagaatcaaagtgggaa
aaggctccaccttctggtgctggttccactggtagtgggcagtgggaaaataatgaaaat
acgaaggctactaactcatcaaatgatcatgactggtctggttgggggagaaaagttgag
cctgatgtggtcactacaaaagcccaagagaatacttcaaaatctggttgggatagtacg
ccaagctggggaaataaagctactaatactacaacaaatgacaatgactggtcaaattct
gctacaaaagaagttgaaccagattccttcaattccatggagaacactccaaagtctggc
ggttgggatactgcagctacttgggggacgaaagctaaagatgttgataactttaaagga
gaaacagagccagaaaaagcaaatgtatggtctggttggcagaacgataaagctgaaaca
caagatgccttcattaaaaagattaactctagatcttgtggatcggaggataaggcttgg
tcaacaggaacttccaaaacatatgataattggtctaaccaggtgaaggataaagctgaa
tcatgccaggttcaagtgcaagaagttccttccaaaacaaacggttgggattctgcaggg
ggttggcaaaagaattctggagatgctgatcaatctgaagcatgcaggaatgatgaccag
gcatcaatggacctagagacggtggctgataggtggggtagcagggccactcaaaggaag
gactcgaaggataactttccatccaaagcagtggaacatggtgattcacctctcatcaat
cattcttggaatcaacataaatcatcagaggttttccggggagaatctggtaatgatttc
tgggggcaacggaaatcacaagatgttataaaaccttcacaaggctggggctcccaagtt
aagtcaaacgaaggctcaagtcaaaatacacaagttgaacgactttggagctcgcagaat
gagtctgatcaagttgcgagtgagcataaatcttctgattcacgaggttgggactctcag
gagaagttgaataagccatgggacaagcagaagtctttggaagcttcacaaagttggagt
tcccaaaatgactcgatgggttcatgggggcagctccagagggaatctgaagaatttagt
cagggatctcaggatgattcgaataaacaatttagtcaagtacaaaaatcaccagaagtt
tcacatggttggggctctcataaagagtcaagcgaattgacaacttcacatggttggggc
tctcataaagagtcaagcgaattggcaacttcacatggttggggctctcataaagagtcg
agcgaattgacaacttcacatgcatgggagaaaaaaaatcaagggtcaaaaggttgggga
gcaaatgttggggagtggaaaaacaggaagaaccgccctccaaaatcacctggaattctt
aacgacgatgctggtttacgtgcaatatatactgcatcaggacaacggttggatatgttt
acaaccgaagaacaagatattcttgccgatattgaacctatcatgcaatccatcagaaaa
attatgcatcaatctgggtacaacgatggggatcctctgtctgccgaagatcaatccttt
atacttcagaatgtatttaacttccatcctgacaaagctgtaaaaatgggtgctggaatt
gaccacttcatggttagtcggcacagcagctttcaggagagcaggtgcttctatgttgtg
tcaaccgacggccataaagaggacttctcgtatcgtaaatgccttgataacttcgtcaag
ggcaagtatcctgacatcgccgaaccatttgtagccaagtacttcaggaaacctcgttca
ggtaaaccccgagatcgaaactccgcatctgaggaaaatgagaacaaaaacgttggcaaa
gagctgactccaattccagaagaaactgaaaatgggaatcaacaatag

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