Momordica charantia (bitter melon): 111015633 Help Entry 111015633         CDS       T05045                                  Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism mcha  Momordica charantia (bitter melon) Pathway mcha03013   Nucleocytoplasmic transport mcha03040   Spliceosome Brite KEGG Orthology (KO) [BR:mcha00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     111015633   09122 Translation    03013 Nucleocytoplasmic transport     111015633  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mcha03019]     111015633    03041 Spliceosome [BR:mcha03041]     111015633 Messenger RNA biogenesis [BR:mcha03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      111015633 Spliceosome [BR:mcha03041]  Complex C   Other components    EJC/TREX     111015633  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     111015633 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 ABPF_N LIM_bind Motif Other DBs NCBI-GeneID:  111015633 NCBI-ProteinID:  XP_022146410 UniProt:  A0A6J1CX71 LinkDB All DBs Position Unknown AA seq 1890 aa AA seqDB search MTLPPLECIYVVESNLREWKSGNSSFRVPNPVPVLRFLYELCWTMVRGELPFPKCKAALD SVEFSDKISAEELGSCFADVITQLAQDITLPGEYRVRLLKLAKWLVESAFVPLRLFQERC EEEFLWEAEMIKIKAQELKNKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRVTDTS NNNLPGSTIGIIKSLIGHFDLDPNRVFDIVLECFELQPENSVFLELIPIFPKSHASQILG FKFQYYQRIEVNSPVPFGLYKLTALLVKEKFIDLDSIYAHLLPKENEAFEHYDSFSSKRL DEANRIGKINLAATGKDLMDDEKQGDVSIDLFAALDLESEAVSERSPELENNQTLGLLTG FLSVGDWYHAHVLFDRLSPLNPVEHLPICNSLFRLIEESISSAYCNVRQNHQNHYQSVVS NSGTSIDTTDTTSLLVAGSYIDLPRELFQMLAAAGPYLYRDTILLQKVCRVLRGYYMSAV EFANSGERGLNPEFVMPAGNRVPHLHLKDARLKIEEALGTCLLPSLQLIPANPAVGQGIW EVMNLLPYEVRYRLYGEWEKDDEKIPMVLAAKQTAKLDTRRILKRLAKENLKQLGRMVAK LAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLAQGGRDKLKD DGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELVQQMANV QYTENLTEEQLDAMAGSETLRYQATSFGVTRNNKALIKSSNRLRDSLLPKDEKELAVPLL LLIAQHRSVVVINADAPYIKMVSEQFDRCHGTLLQYVEFLSSAITPASAYAQLIPSLNEL AHLYHLDPEVAFLIYRPIMRLFKCQGGSDIFWPLDGNDANVAGNNSDSEPAECSADVILD LGSSQKPVRWPDLLDTVKSMLPPKAWNSLSPDLYTTFWGLTLYDLYVPRSRYESEIAKQH SSLKALEELSDNSSSAINKRKKDKERIQESLDRLSNELVKHEENVASXRRRLSREKDKWL SSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKT LQPMICCCTEYEAGRLGRFLYETLKIAYHWKSDESVYERECGNMPGFAVYYRYPNSQRVT YGQFIKVHWKWSQRITRLLIQCLESTEYMEIRNALIMLTKISNVFPVTRKSGINLEKRVA KIKSDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKTAPSLAAKSSASNLAAGQ SNSIYLSQSEPGGGKTAALAIPNSDSGNMAKDHSLRSRASDVRTDKIEGLSVPKSELGHG KLKSTSSNGPDSQPLPPSTSVHSGSLRMVESQKPGDDLSRTLDESSSKVISKTSSESELR VSAKRSAPAGSLNKAPKQDTTKDETRSGKAASKNPGSSTSDRELSIYATDGGRHGGSSSV PSSVMANGNTQISSTRGPSSSVKASDVNAIESKAESGIGRTSDSRAASVKDDGTEALEVA RSSSSRLAHSPRHDNSASGSRSSDKLQKRASPAEEPDRQGKRRKGDGETRDLDGDFRISD KDRSTDPRSVDTDKIGTDEQSGYRGSDKTLDRTKDKVNERYDRDYRDRVERPEKSRGDDP SVERTRDRSIERYGRERSVEKVERVSDRYPDKSKDERNKDDRVKLRYSDTTIDKSHVDDR FHGQSLPPPPPLPPHMVPQSVNSGRRDEDADRRFGTTRHTQRLSPRHEEKERRRSEENLI SQDDAKRRREEEFRERKREEMSLKVDDREREREREKANVLKEDMDASAASKRRKLKREHL SLAEAGEYSPVGPPPPPIGAGVSQSYDGRERGDRKGVMMQRAGYLDDPGLRIHSKEVVNK MTRREADLMYDREWDDEKRMRADQKRRHRK NT seq 5673 nt NT seq  +upstreamnt  +downstreamnt atgactctccctccgcttgagtgtatatacgtcgtagaaagcaatcttcgcgaatggaag tccggaaactccagctttagggtccctaaccctgtccctgtgcttcgcttcctctacgag ctctgctggaccatggtccgaggcgaattgccgttcccgaagtgtaaagcagcattggat tcggtagagttctcggacaaaatatctgcggaggagttaggatcgtgttttgctgatgtc attacccaattggcccaagacatcacattaccaggagagtatcgtgttcgccttttaaaa ctggctaaatggctggttgaatctgcatttgttccattgaggctttttcaggagcggtgt gaggaagaatttctttgggaagctgaaatgataaagattaaggctcaagaattgaaaaat aaagaggtcagagtaaatacgcgtcttctttatcaacaaacaaagtttaatcttctgcgg gaagaaagtgagggctatgccaagttggtaacgcttctttgccgtgtcaccgacacttca aataataatttgccaggttcaacaattggtattataaagtcattaattgggcattttgat ctggacccaaaccgtgttttcgacattgtcctggagtgttttgaacttcaaccagagaat agtgttttcttagagctgattccaatatttcccaagtctcatgcttcacaaatcctcggg tttaagttccaatattatcagcgcattgaagtaaattcaccagtgccatttgggctttac aagcttacagcgttactagtgaaggaaaaatttattgatcttgatagcatctatgcacat ctacttcccaaggagaatgaggcgtttgagcattatgattctttttcttccaaacgactc gatgaggctaacaggattggaaaaataaatcttgccgcaactggaaaggatcttatggat gatgaaaagcaaggagatgtaagcattgatctttttgctgctcttgatttggaaagcgag gcagtaagtgaaaggtctccagagctggaaaataatcaaacattgggcttgcttacagga tttctttctgtgggtgactggtatcatgctcatgtactttttgatcggctttcacctctc aatccagtggaacaccttccaatttgtaacagcttgtttaggctcatcgaagaatcaatt tcctctgcatactgtaatgttcgtcaaaatcatcaaaatcattatcagagcgtcgtgagt aattcaggaactagcattgatactacagacaccacgagtttgctggttgctggttcttat atagatcttccaagggagcttttccagatgcttgctgctgctggaccttatctctatcgt gatacaattttgctgcagaaggtttgcagagtgctgagaggttattatatgtcggcagtt gagtttgccaayagtggggaaagaggtctgaatcctgaatttgttatgccagctggcaac cgggttcctcatcttcacttaaaggatgctaggttgaagattgaggaagccttgggaacc tgcctacttccttctttacagttgatacctgccaatccggctgttggtcaaggaatatgg gaagtaatgaatcttcttccatatgaggtgcgatatcgtttatatggtgaatgggagaaa gatgatgagaagattccgatggttctggctgcaaagcaaacagcaaagttggacacgcgr aggattttgaagaggctggctaaggagaatttaaagcaattgggtaggatggttgcaaaa ctcgctcatgctaatccaatgactgtccttcgcacaatagtacaccagattgaggcatat agggatatgattactcctgtagtagatgcattcaagtatctgactcagcttgagtatgac atattggaatatgttgtgattgaacgtttggcacaaggagggcgtgataagytgaaggay gatggcctaaatctgtcagattggctccaatcattagcttcattttggggtcacctgtgt aagaagtacccatctatggaactaaggggtttgtttcagtatctcgttaatcagttgaaa aaaggtcaaggaattgagcttgttctcctacaggaacttgttcaacaaatggccaatgtc caatacacagaaaacctaactgaggaacagctggatgctatggcaggaagtgagacactt cgttatcaagcaacttcttttggagttactcgaaataacaaggcattgatcaagtcaagc aacagactgcgtgactcattgcttcctaaggatgaaaaagaattggcggtcccccttttg ctacttattgctcaacaccgttcagtggttgttataaatgcagatgctccgtatataaag atggtgagcgagcagtttgatagatgtcatggaactctgcttcaatatgtggaatttctt agtagtgcaatcacgcctgcatcagcttatgctcaattgattccctcactcaatgagctt gcacatctttatcacctagatcccgaggttgctttcttgatataccggccaataatgagg ctattcaagtgtcaaggtggttctgatatcttctggccactggatggcaatgatgctaat gttgcaggcaataattctgattctgaacctgcagaatgttctgctgatgtcattttggat cttggttcttcacaaaaacctgtgaggtggccggatcttcttgatactgtgaagtctatg ttacctccaaaagcttggaatagcttgtctcctgatctctatactacgttttggggtctc acactctatgatctttacgttcctcggagtcgatatgaatctgaaattgctaagcagcat tcttctctaaaagctttagaagagctctctgataactcaagttctgcaatcaayaaaagg aagaaagacaaagaaagaattcaagaatctcttgatcgcctgtccaatgaactcgttaag catgaagagaatgttgcatccrttcgtagacgactttctcgtgaaaaagataaatggttg agctcctgtcctgatactttgaaaattaatatggagttccttcagcgatgtatttttccc cgctgtacattcagtatgcctgatgctgtctattgtgctatgtttgtgcacactcttcat tcccttggaacacctttctttaatacagtcaaccatattgatgttttgatatgtaaaacc ttgcaacccatgatttgctgctgtacggaatatgaagcaggcaggcttggaaggttttta tatgagacactaaagatagcttatcattggaagagtgatgaatccgtttatgaacgtgaa tgtggaaatatgcctggatttgctgtctattataggtatccaaacagccaaagagtaacg tacggccagttcatcaaggttcattggaagtggagtcaaagaattacacggttactgatt caatgcttggaatctacagagtacatggaaattagaaatgctcttattatgttgacaaaa atttccaacgtttttcctgtcactagaaagagtgggatcaaccttgaaaaacgggttgct aagatcaaaagcgatgagagagaagatctgaaggtgttagctactggtgttgctgcggcc ttggctgctagaaagccttcatgggttacggatgaagaatttgggatgggatatcttgaa ttaaagactgcaccatctcttgcagcaaagtcttcagctagtaatttagctgcgggccaa agtaattccatttatctttcccaaagtgaacctggtggaggaaagactgctgcactagcc atcccaaattcagattctggaaatatggccaaagaccattcattgaggtcragagcttct gatgtgagaacggataaaatagaaggtctttctgttccaaaatctgaactagggcatggt aaattgaaaagcacttcatcaaatgggccagattctcagccactgccgccctcaacgtct gtccattcagggtcgttaagaatggtggaaagtcaaaaaccaggtgatgacttaagtagg actttggatgaaagctcatcaaaagttatttcaaagacctcttctgaatctgagttgaga gtttcagcaaaacgatcagcacctgctggatctcttaataaagcaccaaaacaagatact acgaaagatgagactagatcgggaaaagctgctagcaagaatcctgggtcttccacaagt gatagagagctttcaatttatgcaacagacggtggtaggcatggaggttcttccagtgta ccttcttcagttatggcaaatggtaatacacaaatttcatcaactcgaggcccgtcctct tcagtaaaagcttcagatgtgaatgctattgaatcaaaggcmgagagtgggattgggagg acttctgatagtagggctgcatcagtaaaggatgatggcactgaagctcttgaagttgca agatcctcttcttccagactcgcccattcccccagacatgataattctgccagtggttct agatctagtgataagctgcagaaaagagctagtcctgcagaagaaccagacagacaaggt aaacgccggaaaggagatggtgaaactagagatttagatggagattttcgcatctctgac aaagatagatccactgacccacgatctgtagatactgataaaataggaacggatgaacaa agtggttacaggggttcagataaaactttagatagaacaaaagataaggtaaatgaaaga tatgatagggactacagggacagagtagagcgtcctgaaaagtcccgtggagacgatcct tcagtagaaagaacaagagatagatcaatagaaagatatggaagagagcgctcggttgag aaagtagagagagtttctgataggtatcctgacaagtctaaggatgaaagaaataaagat gatagggtcaaattacgatatagtgatacaaccatagataagtctcatgttgatgatcgg ttccacgggcagagcttgccacctccgccccccttgcctccccacatggtccctcaatct gttaatagtgggagaagagatgaagatgcagataggaggtttggaactactagacacaca caaaggctttctcctcgacatgaagagaaggaacgaagacgttcagaggaaaacttaatt tcacaggatgatgcaaaacgcagaagagaagaggaattccgagaaagaaagagagaagag atgtcattgaaggtggatgacagggagagggaaagggagagggaaaaggcaaacgttttg aaggaggacatggatgcttctgctgcctccaagaggcgaaaacttaaaagggagcatctt tcattagctgaggctggygagtattctcctgttggcccaccgccacctccgataggtgct ggtgtgtctcaatcttatgatggacgagaaagaggagaccgaaaaggagtaatgatgcag cgtgccggttacttggatgatccaggcctaagaattcatagtaaagaagtggtcaacaag atgaccaggcgtgaagctgatctaatgtacgatcgagagtgggatgatgagaagagaatg agagcagatcagaagcggaggcatcggaaataa

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