Momordica charantia (bitter melon): 111015824
Help
Entry
111015824 CDS
T05045
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111015824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111015824
04121 Ubiquitin system [BR:
mcha04121
]
111015824
03036 Chromosome and associated proteins [BR:
mcha03036
]
111015824
03400 DNA repair and recombination proteins [BR:
mcha03400
]
111015824
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111015824
Ubiquitin system [BR:
mcha04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111015824
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111015824
DNA repair and recombination proteins [BR:
mcha03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
111015824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-C3HC4_2
BRCT_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
zf-RING_6
zf-HC5HC2H_2
zf-C3HC4_4
zf-RING_5
PHD_NSD
zf-RING_10
zf-rbx1
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
111015824
NCBI-ProteinID:
XP_022146676
UniProt:
A0A6J1D028
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MADLSHLEKMGRELKCPICLSLLNSAASLGCNHVFCYACIEKSMKSDSNCPVCKVPYRRR
EVRPAPHMDNLVSIYKNMEVASGVNIFVTQNLSSTKLSEDGDKLDEGGCNGSKRLNEEKG
EITAYKRRTLKKGSQKLQKSKRKISDSSPVKPSFPRKKRVQVPQCPLSETPTRPTKLVSS
LNVVNDEEPRKNAIDLEDKGQPVLSPFFWLREGDDEDEKSNQHSDVDQPTDSMTTNGLSF
SDIKDSLDESPSKPTVEEVCGKTSYDLDLFDSEMFEWTQRACSPELCSSPFKLQDEDIAG
TEIKLLAAAPNEETSNQNPNGSCNQSGGILDVVVSDVPPLENNGTKSQHGSTKLTKRGRK
KNETALKKCAKKSVESAVGNHSHLAKETKCLSQKEEHGVSDSFGSLKSGNKSKKKMNFGI
DANKGTLQNVPADPINLGTPNGDLENFGTEISAFPEVEKVRQFTGKSRKSGRANKKAHFG
SDVNKASPENVLADPISLGTPNGGRENFGTEASTFPEVEKVSQSQGKSRKNGKASKKVHF
GIEANKAVVENVPADPISLGTPNNGLEKFGTEISAFTDVEKINQFPEKSPKNGGACRAQR
VVDCCRKSKKQKLDSVDDKLLEKPSLNQNQPVDSAIPCLPTAVATSTGNKRAHEKQEKSS
TVCLNSSDYDNIIQEKQVDAQANCGQLSENLQYSTDEKNLDSTAKRVCSQKHDRLDNKFH
CAFCLSSKESEVSGRMVHYFNGKPIETDDTKNSKVIHAHWNCVEWAPNVYFDGDIAINLE
AELSRSRRIKCNCCGNKGAALGCYEKSCRKSFHVSCAKLMPQCQWDTENFVMLCPLHPDS
KLPSQGSGHQERKSSCTPKRQSNTKCIAVAREISNNGRFMFRESSKKLVICCSALTMAER
EAVAEFQRLSGVTVLQKWDDCVTHIIASTDENGACKRTLKILMGILKGKWVLGIEWIKAC
AQAMEHIEEERFEITLDVHGIRDGPQLGRLRVLNNEPKLFSGYKFFFTADFVPSYKGYLQ
QLVTAAGGTILLRKPVSSNQNIPCSSPNSQVFIVYSLELPDQSNPSEKTNIISCRHSDAE
LLAKSAAAKVATNLWLLNSIAGSKLASLVE
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcagccacctggagaagatgggaagggagctcaaatgcccaatttgtttg
agtcttttgaactctgccgcttcactgggatgcaaccacgtattctgctatgcatgtata
gagaaatctatgaaatcggattcaaactgcccagtttgtaaggtgccttatcggcgaaga
gaagttcgccctgctccgcacatggataatttggtgagcatttacaaaaacatggaagtc
gcttcgggagttaatatatttgttactcagaatttgtcttctactaaattatctgaagat
ggggacaaactagacgaaggtggttgcaacggttcaaaacggcttaatgaggagaaaggt
gagatcacagcttataaacgaagaactttgaaaaaaggttcacaaaaattacaaaaatcc
aagcggaagatttctgattcttcccctgtgaaaccttcatttccaagaaagaagagggtt
caggtgccgcaatgtcccctttcagaaacaccaacccgacctacaaagttagtaagtagt
cttaatgtggtgaatgatgaagaaccaagaaaaaatgcaattgatttggaggataaaggt
cagccagttctttcacctttcttttggttgagagaaggagatgacgaagatgaaaagtca
aatcagcattctgatgtggatcaacctactgactcaatgacaacgaatggtctttccttc
agtgatatcaaggattcactggatgaaagcccttcaaagcccacagtggaggaagtgtgt
ggcaagacatcctatgacttggatctcttcgatagtgaaatgtttgaatggacccagaga
gcctgttctcccgagctttgttcaagtccctttaaactgcaggatgaagatattgctgga
actgaaataaaattgttagctgcagcacctaatgaagaaactagcaatcaaaatccaaat
ggaagttgtaatcaaagtggtggtatcctggacgtggtggtatctgatgtgccgcctctg
gaaaacaacggtactaaaagtcagcatgggagtacgaaacttaccaaaagaggtaggaag
aagaacgaaactgcactgaagaagtgtgctaaaaaatctgtagaatcagctgttgggaat
cattcccatttagctaaggagaccaaatgtttgagtcaaaaggaggagcacggggtcagc
gatagctttggtagtttgaaaagtggtaacaaaagcaagaaaaaaatgaactttggtatt
gatgcaaataaggggactcttcaaaatgttcctgccgatcccattaatttgggaactcca
aatggtgatcttgagaattttggaaccgaaatatcagcttttccagaagtagaaaaggtt
aggcaattcacgggaaagagtcgaaagagtggtagagccaataagaaagcgcactttggt
agtgatgtaaataaggcaagtcctgaaaatgttcttgccgatccaattagtttaggaact
ccaaatggtggacgtgagaattttggaaccgaggcatcaacttttccagaagttgagaag
gttagtcaatcccagggaaagagtcgcaagaatggcaaagccagcaagaaagtgcacttt
ggtattgaagcaaataaggcggttgttgaaaatgttcctgccgatcccattagtttagga
actccaaataatggtctcgagaaatttggaaccgagatatcagcttttacagatgtggaa
aagattaatcaattccctgaaaagagtcccaagaatggtggagcctgcagagcccagcgg
gtggtcgactgctgcaggaagtctaagaaacaaaagctggattcagtggacgacaaactg
cttgagaaaccatctctcaatcagaatcagcccgttgatagtgctattccttgtttaccc
actgcagttgctacatctactggtaataaaagggcacatgagaaacaagagaaaagttcc
actgtttgcttaaatagtagtgattatgataacatcattcaagagaagcaggtcgatgct
caggcaaattgcggtcagctctctgaaaatctccaatacagtaccgatgaaaaaaacctg
gattctactgccaaaagagtttgttcgcaaaagcatgacagattggacaataaatttcat
tgtgctttctgtctctcatcaaaagagtcagaggtttctggaagaatggtccactacttc
aatgggaagccgattgagacagatgatactaaaaactcaaaggtcatacatgcacactgg
aattgtgttgaatgggcacccaatgtttactttgatggcgacattgcgattaaccttgaa
gctgagctcagtagaagtcggagaattaaatgtaattgctgtggaaataagggggctgct
cttgggtgttatgagaagagttgtcggaagagctttcatgtttcttgtgcaaagttgatg
cctcaatgtcaatgggacactgaaaattttgtgatgttatgccctcttcatccggattct
aaactgccaagccaaggttcgggacatcaagaaaggaaaagcagctgcactccaaagcga
cagtcgaacactaaatgtatagctgttgcgcgtgagatcagcaataatggaaggtttatg
tttcgtgaatcatctaaaaagttggttatatgctgttcagctctcaccatggcagagagg
gaagctgttgcggaatttcagagattatctggagttacagtgttacaaaaatgggatgat
tgcgttacacatattattgcatcaacagatgaaaacggggcatgtaaaagaaccctcaaa
attttgatgggtattttgaagggaaaatgggtattgggtattgaatggattaaggcttgt
gcacaagccatggaacatatagaggaagagcgctttgagattactctcgacgtccatgga
atcagagatggccctcaacttggaagattgagagtcctgaacaatgaaccaaaacttttt
tctggttacaagttcttctttacagcggatttcgtaccttcatacaaaggatatctccag
caacttgtgactgcagctggaggaactattctccttagaaaaccagtttcaagcaaccaa
aacatcccttgttcttcacccaactcccaagttttcatcgtttacagtcttgagcttcct
gatcaatcaaatccgagcgaaaagaccaacattatcagttgcaggcattccgatgccgag
ttgcttgccaagtcagctgcagccaaagttgcaaccaatttgtggcttttgaactcaatt
gcaggcagtaaattagcaagtcttgtggagtaa
DBGET
integrated database retrieval system
