Momordica charantia (bitter melon): 111016026 Help Entry 111016026         CDS       T05045                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism mcha  Momordica charantia (bitter melon) Pathway mcha03440   Homologous recombination mcha03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:mcha00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     111016026    03450 Non-homologous end-joining     111016026  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:mcha03032]     111016026    03400 DNA repair and recombination proteins [BR:mcha03400]     111016026 DNA replication proteins [BR:mcha03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     111016026 DNA repair and recombination proteins [BR:mcha03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      111016026     BRCA1-C complex      111016026    NHEJ (non-homologous end-joining)     MRX complex      111016026 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 SMC_N AAA_21 Rad50_zn_hook AAA_15 SbcC_Walker_B CCDC92 HMMR_N AAA_29 OVT1 ABC_tran AAA_16 AAA_22 Motif Other DBs NCBI-GeneID:  111016026 NCBI-ProteinID:  XP_022146955 UniProt:  A0A6J1CYT2 LinkDB All DBs Position Unknown AA seq 1316 aa AA seqDB search MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI FSATRYTKALEVIKKLHKDQAHEIKTYKLKLENLQTLKDALLQLRESISQDEEKTESVKS QMQELEKNIQDIDAKIHHAETILKDVRKLQDQISTKTAERSTLFKEQQKQYAALAEENED TDEELKEWKTKFEERIAILESKVSKLEREMNDMETKSSFLKQTINEYIWEISKLQTEAEV HMSLKIERDSTIEELFARHNLGSVPNTPFSDEVAFNLTNRIKSRLVDLDKDMQDKRLSND VELNTAWDCYMDANDRWKNVEAQKHAKAEIKRGIMKRIEEKESERDSFELQISHVDLSHI DEREKNMQIEVERKTNQLAEREFESTIRQKQSDLYGIEQKIKAVNREKDIMAGDSEDRVK LALKKAELDNHKKKHRKIIDEYKDKIRGVLKGRFPPEKDLKKEITQALRAVGMEHDDLNS KSREAEKDVNMLQMKIQEVNNNISRYQKEMESRKRFIESKLQSLDPHSFSVDLYLRALEV AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFTAEEEDEFVKKQRVKAAS SAEHMKVLAVESSSADSHFQQLDKLRMVFEEHIKLSNETIPNAEKVLHQLNEELDEKSQA FDDVVGVLAHVKADRDAVENLVQPIDTADRLFQEIQTLQKQVDDLVYKLDFRGKGVKTME EIQSELNALQNTKDGLHNELEKLRDEQRYMENDLSNIQIRWHTLREEKVKAANTLRDVKK AEEELDRLTEEKSQVDLDEKHLAEAIVPLSKEKDKLLNDYNELKEKLNREYEELGEKKRN FQQEVETLLRTASKIKEYLDLKKGERLKELQEKKAQAESQLQSCDIRKQEISAELNKSKD LMRNQDQLRRNIEDNLNYRKTKAEVDELARDIESLEEQILKIGGVSTIEAEIGKLSQERE RLLSELNRCHGTMSVYQSNISRNKIDLKHAQYKDIDKRYFDQLIQLKTTEMANKDLDRYY NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVMKDDHQHSIIESQEIFD NT seq 3951 nt NT seq  +upstreamnt  +downstreamnt atgagtacagtagacaagatgctgattaaaggtattcggagtttcgaccccgaaaacagg aacgtcatcaccttcttcaagccattaactctgatcgttggccctaatggtgctgggaaa actaccataattgaatgcttgaagctctcttgcactggcgagttgcctcccaacgccagg tctggccacagtttcattcacgatcctaaggttgcaggagagacagagacaaaggggcaa ataaaacttcggtttaagacagcggcgggcaaggatgtggtttgtataaggtccttccag cttactcaaaaggcttcaaaaatggagtacaaagcaattgagagcgtgcttcagactata aatccacataccggagagaaagtttgtctcagctataggtgtgcagatatggatagggaa attccagctttaatgggtgtgtcaaaggctatcctggaaaatgtgatatttgttcaccaa gatgaagctaactggccattgcaagatccttcaacattaaagaagaaatttgatgatata ttttctgctacaagatatacgaaggcattggaggtcataaagaagcttcacaaggatcag gctcatgaaataaagacttacaaactgaagttggagaatcttcaaactttaaaagatgca ttattgcagcttagggaaagcatttctcaagatgaagaaaaaacagaatctgtaaaaagt caaatgcaggaactggagaagaatatccaagatattgatgctaaaattcatcatgctgaa acaatcctgaaggatgtccgaaaactacaggaccaaatatctactaagactgctgaaaga agcactttatttaaggagcagcagaagcaatatgctgcccttgccgaggagaatgaagac accgatgaagaattgaaggaatggaaaaccaagtttgaagaaaggattgctattttggag tctaaagtaagcaagttagagagggagatgaacgacatggagactaaaagttcctttctt aaacagacaattaatgaatatatatgggagataagcaagcttcaaacagaagctgaggtg cacatgtcattgaagatcgaacgtgattctactattgaagaactttttgcaagacataat ctaggttctgtgccaaatactcctttcagtgacgaagttgcattcaacctaacaaataga ataaaatcaagattagtggaccttgacaaggatatgcaagataaaaggctttcaaatgat gttgagcttaatactgcctgggattgctacatggatgcaaatgatcgatggaaaaatgtt gaggctcaaaaacatgctaaagcagagattaagagaggaattatgaaacgaattgaagaa aaggagagcgagcgagattcatttgaacttcaaatttctcatgtcgatctttctcacatt gatgaaagagaaaaaaacatgcaaattgaggttgagagaaagacaaaccagcttgctgaa agagaatttgaatcaacaatacgtcaaaagcagagtgacctatatggcatagagcagaaa attaaggctgttaacagagagaaggacataatggctggtgactctgaggacagagtaaaa cttgctctcaagaaagcagagttagataatcataaaaagaagcatagaaaaataatagat gagtacaaggacaaaattagaggagtactgaagggaagatttcctccagagaaggatttg aaaaaagaaatcactcaagcactcagggctgttggaatggagcatgatgacctaaattct aaatctcgtgaagctgagaaggatgtgaatatgttgcagatgaaaatacaggaagtgaac aataacatttctagatatcaaaaggaaatggaatcaagaaagagatttattgaatccaaa ctccagtccttggatccacactcttttagtgttgatttgtatctcagggccttggaagtg gctaaggagaaaaaagacgtgcaaaaaagcaagtacaatattgcagatggtatgcgtcaa atgtttgatccattcgaaagggttgcccgtgctcatcatgtttgcccttgttgtgagcgc cccttcacagcagaagaagaagatgaatttgttaaaaagcaaagagtgaaggctgcaagt tctgctgagcatatgaaagtgcttgcagttgagtcttcaagtgctgactctcattttcag caactggacaagctccgcatggtttttgaagaacacatcaaactaagcaatgaaacaatt cctaatgcagagaaagtacttcatcagcttaatgaagagttggatgaaaagtcacaggcc tttgatgatgtggtgggtgtcttagctcatgtaaaggctgaccgggacgcagttgagaac ttggtgcaacctattgacactgctgacaggctttttcaagaaattcaaactttgcaaaag caagttgatgatttggtctacaagcttgattttcgagggaaaggtgtgaaaacaatggaa gaaattcagtctgagctgaatgcattgcaaaacaccaaagatggtttacacaatgaacta gagaagctaagggatgaacaaagatatatggaaaatgatttgtcaaacattcagataaga tggcacactctaagagaggaaaaagtgaaagcagctaatactttgcgtgatgtgaagaag gcagaagaagagttggaccgtctgactgaggaaaaaagtcaagttgatcttgatgagaag catttggcagaagcaattgtccctttgtcaaaggagaaagataaattacttaacgactat aatgaactaaaagaaaagcttaatcgtgaatacgaggaactgggtgagaaaaagaggaat ttccaacaggaagttgagacacttcttagaacagcttctaagattaaggagtatcttgat ttaaagaaaggtgagaggctgaaagaactacaggaaaagaaagctcaggctgaatctcaa cttcaaagttgcgacattaggaagcaggaaatatcagctgaattaaacaaaagtaaggac ttgatgcggaatcaagatcaattaagaaggaatattgaggacaacttgaactaccggaaa acaaaggctgaagttgacgagcttgcccgtgatatcgaatcattggaagagcaaatttta aagattggaggggtttcaaccattgaggctgaaattggaaagctctcacaggaaagagag aggcttttgtctgagctaaacaggtgtcatgggacaatgtctgtctatcaaagcaatatt tcaagaaataaaattgatttgaaacatgcccaatataaggacattgacaagcgatacttt gatcagctaatccagcttaagacaactgagatggcaaacaaggacctggacagatattac aatgcccttgacaaagcactcatgcgctttcacacgatgaaaatggaggaaataaataaa attataagggagttgtggcaacaaacatataggggacaggatatagactatataagtatt cattcagattccgagggtgcaggaactcgttcatacagctacaaggttctcatgcagact ggagatgctgaattagaaatgagaggaaggtgcagtgctggtcaaaaggttcttgcttca cttataattcgattagcattggccgagacgttttgcctcaactgcggaatactcgctcta gatgagccaaccactaacctagatggtccaaatgctgaaagtcttgctgcagctcttctg cgaatcatggaggacaggaaagggcaggagaactttcagctcatagtaattacacacgac gagcgtttcgctcagctaattggtcagaggcagcatgcggagaaatattatcgagttatg aaagacgaccatcagcatagcattattgaaagccaggagatatttgattga

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