KEGG   Momordica charantia (bitter melon): 111016076
Entry
111016076         CDS       T05045                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha03082  ATP-dependent chromatin remodeling
mcha03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111016076
   03083 Polycomb repressive complex
    111016076
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mcha03036]
    111016076
Chromosome and associated proteins [BR:mcha03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     111016076
  Histone modification proteins
   HAT complexes
    HATB complex
     111016076
   HDAC complexes
    Sin3A-HDAC complex
     111016076
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     111016076
    PRC2.2
     111016076
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     111016076
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111016076
  Chromatin remodeling factors
   NuRD complex
    111016076
   NuRF complex
    111016076
   NuRF complex (fruit fly)
    111016076
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz Beta-prop_EIPR1 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 WD40_RFWD3 Beta-prop_WDR75_1st EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_RIG_1st WD_LRWD1 eIF2A Beta-prop_HPS5 NBCH_WD40 MIOS_WD40 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 Beta-prop_TEP1_C Phage_CRI
Other DBs
NCBI-GeneID: 111016076
NCBI-ProteinID: XP_022147047
UniProt: A0A6J1D1A6
LinkDB
Position
Unknown
AA seq 423 aa
MGKDDEGMRGEMEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDSENDARHYDDDRADAGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNQFIIATKTVSAEVFVFDYSKHPSKPPLDGTCNPDLRLRGHNTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKTLEAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLVWDLRTPTVNKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISSALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPEEPP
KAS
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggggaaggacgacgaggggatgcgtggagaaatggaggagcggctgataaacgaggag
tacaagatatggaagaagaatactccgtttctctacgatttggtcatcactcatgcccta
gagtggccttctctcaccgtcgagtggttgccggaccgggaggagcctcccggcaaggat
tactccgttcagaagatgattttggggactcatacttccgagaatgagcccaattacctc
atgctcgctcaagttcagcttccgctcgaggattccgagaacgatgcgcgccattacgac
gacgaccgtgccgatgcgggtggcttcgggtgtgctaacggcaaggtacaaataatccag
caaataaatcacgatggcgaggtcaatagagcccgttatatgcctcaaaatcaatttatc
attgccacaaagactgtcagtgccgaagtctttgtttttgactatagtaaacacccatcc
aaaccacctctagatggtacatgcaatcccgacttacggttgaggggccacaatactgaa
ggttatggtttatcatggagtaagttcaaacagggccatttacttagtggctctgatgat
gcacagatttgtttatgggacattaatgctactccgaagaacaaaacccttgaggctatg
caaatttttaaggttcatgaaggtgttgtggaagatgttgcatggcatctgaggcatgag
tacttatttggttcagtaggtgatgatcaatacctactcgtatgggatctgcgaactcct
acagttaataagcctgtacagtctgtggttgctcatcaaagtgaggttaattgcttggcg
ttcaatccctttaatgagtgggtagtagccactggatcaactgataagacggtgaagttg
tttgatctacgtaagatcagctctgcactccatacctttgactgtcacaaggaggaggtt
tttcaggttggctggaatccaaagaacgaaacgatcttagcttcttgttgtcttggtagg
agactcatggtttgggaccttagcaggatcgacgaggagcagacgcctgaggatgcggaa
gatggcccaccagaattgctgtttattcacggcggtcacaccagtaaaatatcagacttt
tcttggaatccctgtgaggattgggtcgttgctagcgtagctgaagataacatactccaa
atctggcagatggctgagaacatctaccatgatgaagatgatctgccagaagaacctccc
aaggcctcttaa

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