Momordica charantia (bitter melon): 111016342
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Entry
111016342 CDS
T05045
Name
(RefSeq) uncharacterized protein LOC111016342 isoform X1
KO
K24155
rabconnectin-3a
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111016342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcha04131
]
111016342
Membrane trafficking [BR:
mcha04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111016342
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
111016342
RAVE complex
111016342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
EIF3I
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
111016342
NCBI-ProteinID:
XP_022147405
UniProt:
A0A6J1D030
LinkDB
All DBs
Position
Unknown
AA seq
2316 aa
AA seq
DB search
MESVLIEKASTVLVSQSEGEYGHVKSELSHPLPITIIQWRPSIKAPESVKNTPRHVLLTC
CLDGTVRLWSETENGKARKFSKDINNKMSMKRHFSVAAVIEINQALNGTLGMDLFVTWAT
EIRGMCKPFEVAKKVYSSIGLEHNSVGNCEWLISLGPGSSVTFWAVHCLDDISPLRFPRV
TLWKKQELKGFEVGRHYMDGCTNLSNNILLKKVVISRIHPTGPPSMCSLIQLLPCNSLVW
SLLSAPTSTDTGDASFDKNRLENSSSCSATSQLNLSGHDGKILHVAVHPYNCEAEIAASL
DSNGLVLFWSLSSISNCVLGSPTLTPSWELCGKLITQDSCSKYTSVQWAPSILDGELILL
MGHARGIDFFAVRISQSDEENTDCHYLCTIPFTGHGPFENGPTNIFSISFPSNCNMTYKF
NKFMLLGIWMKGFQALSWEITLHAYDISGTGIHCNCDIESENIADSILRFESPFGSKKYC
VSIIPCSSQLPNSQIHDQITSFAVVHQGTFVPVLQKLASLGEPYTPAYVMATGSADGSLK
LWRSNIGKPSIFHVPWELVCVVVTHQGPITALCLTDCGRKIATISKDNQKCNTSNVHIWE
LGYLGVGTLLFEDKLSFESNIVALDWLTLGNGQFLLGICLQNELCVYSPKRFGGQTLSCI
TKSLDTKTWICIGFARTLSSNCGFLWGPRTTAIVVHDHYFCIVSPWLFLVDKNHDAMCNP
YYIEETKAHHVNGTVVDISAAVFSDECCGIEKLPDDNYDSKCRSKSLANFYAESKTLSST
LNPWVAQMKNKSGLGLISMLDVVDKLCGSLSSFHPQALLINIYSGKWKRAYTALSHLIEH
LPSDEKSSPNPTYTIPEILLSDYFEGVVKTSTDKGVQWSTSDSSSQFKGGVSQWTFNWES
TSNGNSFIPSSTKSEFSSFIEPLEKFYEVAGLTSVEKTQTLAIVDLLGEISNKSSASAYE
SLDEPGRRYWIALRFQQLQFLRQNGRAASLEELVIDSKLSGWAYHSDCQENLLDSVISNE
PTWQEMRSLGVGIWFTNTTQLRTRMEKLARSQYLKKKDPKDCMLLYVALNRIQVLAGLFK
ISRDZKDKPLVGFLSRNFQEEKNKAAALKNAYVLMGRHQLELAIAFFLLGGDTSSAISVC
AKNLADEQLALVICRLVEGRGGHLQQHLITKFMLPSAIEKGDAWLASILEWELGNYSQSF
MNVLGLESHSVTEIPFFSSKHIAFLDQSIGMYCLLLATKNSMKKAVGEQPAEVLCRLATL
MMATALNRCGLPLEALEHLSTCGSIAEVTDRTNGVDIQCFETISKICKQSPRYSSSWLSV
EFAVHLEHRAKLDLAVQYFSKLIRKHPSWPIIKLESVGWMGCLKEDEVDYEKSLGSFQHK
LYVGFAQFEMKFSLIPASLVXMILVFLCNLGLQFIAHDIFHGSTSQECSDDKYQRIHTYF
LYPLSHKSLLKIAQEISFSTSRYIIACSLSFHRGEIMTKCLDIWWYYLQGLLLSLQGLRT
ALRSIHGSLKEDLVSKLVTILDLVEYNLYFASAWLLRDSKCLLKMLQPLFVAFSNAESPH
DIDMGHLNQLFPHIGELIAQNFLTGVDYNHQILAGVPTEQSDDIVHSIPVDERWHIIGAC
LWQHMSRFVKHKLAILTNKSKEGNFGSIILGNLFTWAPSLSTMTPDQKDILKDVVELISM
SLTSLLATVLARVSSYQLKQLVSSLQHKLDQKLYVATVVWFEHFSQTQSRQQKHHTDEEI
YNMDMCNEGDFETLWNITSNPNIISECFAHEKVNLLHCFDHKLSEIWSDIYNGTTRAEDT
CTREGALVSSSSSNATVSPGKLFGNGKTLVRSDKELATLEDVMSFQKSKEIYRRSGELLE
ALCINSVDQRQAALASNKKGIIFFSWEDGMASRDEEDYIWSKSEWPLNLNGWAGSESTPA
PTCVFPGVGLGSRKGAHLGLGGATVGVGSSARPGRDLTGGGAFGISGYAGIGASGLGWET
QEDFEEFVDPPATAEHTSTRAFSSHPSRPLFLVGSTNTHVYLWEFGKDKATATYGVLPAA
NVPPPYALASISSVQFDQCGHRFATAALDGTVCSWQLEVGGRSNVLPTESSLCFNGHASD
VTFVTSSGSIIAVAGYSSTAVNVIIWDTLAPPTTSRASIMCHEGGARSLSVFDNEIGSGS
ISPLIVTGGKGGDVGLHDFRYVVTGRPKKQKHSSKDERISDASNINMPSTIGEQNFNGML
WYIPKAHSESVTKISSIPNTNLFLTGSKDGDVKLWDAKGAKLVYHWPKLHDRHTFLQPSS
RGFGEVVRAAVTDIQVISSGFLTCGGDGSVKLVQLK
NT seq
6951 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgtgttgattgaaaaagctagcactgtgctggtaagtcagagcgaaggggag
tatggacatgtgaaaagcgagttatcccatcctctacccataactataattcaatggagg
ccttcaattaaagcgcctgaaagtgtcaagaatacaccaagacatgtgcttctgacatgc
tgcttggatggaactgtgagattgtggagtgagactgaaaatggaaaagccagaaaattt
agtaaggatataaataataaaatgtcaatgaaaaggcacttttctgttgctgccgtcata
gagataaatcaggcattgaatggaactcttggcatggatttatttgtaacatgggcgacc
gagatcagaggtatgtgcaaaccttttgaagtggctaagaaagtttactcctcaatagga
ctcgaacacaacagcgttggaaactgcgagtggctaattagcttgggtccaggatcatcg
gttactttctgggctgttcattgtctcgatgacatatccccattgagattccctcgagtc
acgttgtggaagaagcaagagctcaaaggatttgaagtgggacgtcattacatggatggt
tgtacaaacttgagtaacaatattctcctcaagaaagttgtgatctcaaggattcatccg
actggtcccccaagtatgtgctctttgattcagttattgccttgtaattccttggtgtgg
tcgcttttatctgctcccacatcaactgacacaggggatgcatcctttgacaaaaacagg
ttagaaaattcgtcctcgtgttcagctactagtcaattgaatttaagtggtcacgatgga
aaaatcttacacgttgctgtccatccatacaactgtgaggccgagatagctgcctccttg
gattctaatggcttggttcttttctggtcactatctagtatctccaattgcgtactaggc
tctccgacacttactcctagctgggaactttgtggaaaacttataactcaagattcatgc
tccaaatatacaagtgtgcagtgggcaccatcaatcttggatggagaactgattcttctc
atgggacatgcaagaggaattgacttttttgcagttaggattagccaaagtgatgaagaa
aatactgactgtcactacttatgtaccatacctttcactggtcatggtccttttgagaat
ggtccgactaatatattttccatttcttttccctctaattgtaatatgacttataaattc
aataaatttatgttattggggatatggatgaaagggtttcaggcattatcatgggaaatc
accctacatgcttatgatatctctgggactggaatacattgcaattgtgatattgaaagt
gaaaatatagctgacagcatattgagatttgaaagtccttttggaagcaaaaagtattgt
gttagtataatcccttgctcatcacagttacccaattctcaaattcatgaccagattaca
agttttgccgtggtgcaccaaggaacttttgttccggtgctgcaaaaattagcttctttg
ggtgaaccatatacccctgcatatgttatggctactggctctgctgatggtagtttgaaa
ctttggagaagtaacattggcaaaccatcaatcttccacgtgccatgggagcttgtttgt
gttgttgtcacgcatcaaggtcccattactgctttgtgcttgacggattgtggtcggaag
attgcaacaattagcaaggacaaccaaaaatgtaataccagcaatgttcatatatgggag
cttggataccttggtgtggggaccctcttatttgaagataaattgtcctttgaaagcaat
attgttgccctagactggttaactttaggaaatggtcagtttttacttggaatttgtttg
cagaatgaattgtgtgtgtactccccgaagcgctttggtggccaaaccttgtcatgcatc
acaaaatctttggataccaagacttggatctgcattgggtttgctcgtactctctcttct
aactgtggcttcctttgggggccgagaaccacagcgatagttgtacatgatcattacttt
tgtatagttagtccatggttgttccttgtggataaaaaccatgatgccatgtgcaaccct
tattatatcgaagaaactaaagctcaccatgtcaatggaacagttgtagacatttctgct
gctgtttttagtgatgaatgttgcggtatcgaaaaactaccggatgataattatgacagc
aaatgtagatcgaaatctctggcaaacttttatgctgaaagcaaaactctgtcgagcact
ttgaatccatgggttgctcaaatgaaaaataaatccgggcttggtttaataagcatgctg
gatgtagttgataaactgtgtggatcactgtcttcttttcatcctcaagccctcctcatt
aatatatattcaggcaaatggaaacgtgcatatacggctttgagtcatcttattgagcat
cttccttctgatgaaaagagctctccaaacccaacctatactattccagagattcttctg
tcagattattttgaaggagttgtgaaaacttcaactgataaaggagttcagtggagtacg
agtgactcatcatcccagtttaagggtggtgtttctcaatggaccttcaattgggagtct
actagtaatggtaactcattcattccatcctctacgaaatctgaattcagcagctttatt
gagcctcttgagaagttctaygaagtagcagggctaaccagcgtggagaagacacaaact
ctagcaattgtagatcttcttggtgaaatcagtaataaatcttctgcatctgcctatgaa
agtcttgatgagcctgggagaagatattggattgctttgaggtttcaacaattgcaattt
cttcggcaaaatggtagagcagcatctctggaagagctggtcattgactcaaaattgagt
ggatgggcctatcactctgattgtcaggaaaatctattggattcagttatctctaacgaa
ccaacttggcaggaaatgcgaagtttgggtgttggaatttggtttactaatacaacacag
ttgcgtacaaggatggagaaactagcaagatcccaatatctgaagaagaaagatcccaag
gactgtatgcttctgtatgttgcgctgaatagaatccaagttttagccggcctttttaaa
attagcagggatsagaaagataaacccttggtgggatttctttcacgcaattttcaggag
gagaaaaataaggcagcagctttgaagaatgcctatgttttaatggggagacatcaactg
gagttggctattgctttcttcctgcttggtggggacacttcttctgctattagtgtctgt
gcaaaaaatcttgcggatgagcagcttgcactggtaatttgtcgtctagttgaagggcgt
ggtggacatcttcagcaacacctaataacaaagtttatgcttccatctgccattgagaag
ggcgacgcgtggcttgcaagcattctcgagtgggaattaggaaactactctcagtccttt
atgaatgtacttggtttggaatcacattccgtaactgagataccatttttttcaagcaaa
catattgcttttctggaccaaagcattggtatgtattgtctcttgttagcaaccaaaaat
agcatgaagaaagcagtcggagagcaacctgctgaggtcctttgtcggcttgcaaccttg
atgatggctactgctttaaacagatgtggtcttcctcttgaagctttggaacacttgtca
acctgcgggagcattgctgaagttacagataggacaaatggggtggatattcagtgtttt
gagactataagcaaaatctgtaagcaatctcctagatattcctccagttggctgtctgtt
gaatttgctgtccatctggagcatcgagcaaagttagatttggctgttcaatacttctca
aaattgatacggaagcacccaagctggccaatcataaagttagaatctgttggatggatg
ggttgcttaaaggaagatgaggtggattatgagaaatctcttggaagttttcaacataaa
ttatatgtggggtttgcacagtttgaaatgaagttttcattgattcctgcctctcttgtt
rgtatgatattagtctttctgtgtaatcttgggctacaatttattgcacatgatatattt
catggatctacttctcaagaatgctcggatgacaagtatcagaggattcatacttacttc
ttgtatcctctctcgcacaagtcactactgaaaatagcacaagaaatttcattttcaact
tcacggtatattattgcttgcagtttatcgttccacagaggtgaaattatgacgaagtgt
ttagatatttggtggtactaccttcaaggtcttttactatcattacagggcctaagaact
gctttgagaagtatacatggttctctcaaagaagatcttgtttccaagctcgtgaccatt
cttgatttggttgaatataacttgtatttcgcatctgcttggctactgagagactcaaaa
tgtctccttaaaatgctgcaaccactctttgtcgctttttctaatgcagaatctcctcat
gacattgacatgggacatctgaaccaactcttccctcacattggagagttgatagctcaa
aactttttgaccggtgtagattataaccatcagatactggcaggcgtgcccactgaacaa
agtgacgatattgtgcattcaattccagtggatgaaagatggcacattattggggcttgt
ttgtggcaacacatgtccagattcgtgaagcataagttggctattttaactaataaatcc
aaagagggtaactttggcagtatcattcttggtaacctttttacgtgggctccaagtctt
tcaaccatgactcccgatcagaaagacattttaaaggatgtggttgaattgatatcaatg
agtcttacttctctactggccacggtccttgctcgggtttcttcttatcaactaaaacaa
ctggtatcatctttgcaacataagttagatcagaagttgtacgttgcaactgttgtttgg
tttgaacactttagccagactcaatctcggcaacagaagcaccacactgatgaagaaata
tacaatatggatatgtgtaacgaaggtgactttgaaacattgtggaacattacttccaat
cccaatataatatcagaatgttttgcacatgaaaaagttaatctgttgcactgttttgat
cataaactctctgaaatatggagtgacatttataacggcaccacaagggcagaggacact
tgtactcgtgaaggtgcactagtcagtagttcttccagcaatgccaccgtatcgcctggt
aaattatttggtaatgggaaaacgcttgtaagatctgacaaggaattagcaacccttgag
gatgtcatgtcttttcagaaatctaaagagatatataggaggagtggagagctgttagag
gcattgtgtatcaactctgttgaccaaagacaagctgcacttgccagtaataaaaagggt
ataattttctttagctgggaagatgggatggcctccagagatgaagaggattatatctgg
tcaaagtctgagtggcctctaaatctaaatgggtgggcaggctctgaatcgacaccagct
ccaacatgtgtatttcctggtgttggtcttggtagcagaaaaggggcacaccttgggttg
ggtggtgcaactgtgggtgttggatcatctgcaaggccggggagagacttgaccggaggt
ggagcatttggtatttcaggttatgctggtattggtgcttctggcctaggttgggaaaca
caagaggattttgaggaatttgttgatcctccagctactgcagaacacacgagcacaagg
gctttctccagtcatccttctaggcctcttttcttggttggttctaccaatacacatgta
tacttgtgggagtttgggaaggacaaagctactgcaacttatggtgtcttgcccgcagca
aacgtccctccaccatatgctctagcctcaatatcatccgtgcagtttgaccaatgcgga
cacagatttgctactgctgccttagatgggactgtatgctcatggcagttggaggttgga
ggaaggagcaatgtcctacccacagagtcatcgctctgctttaatggccatgcatcggat
gtcacttttgttacttccagtggatcaataatagctgtggctggatatagctccactgca
gttaatgtaatcatatgggatacattggctccacctacaacttcgcgagcatccattatg
tgtcatgaaggtggtgctcgctctctttctgtgtttgataatgaaataggaagtgggtct
atttcaccactcatagtaaccggtgggaaaggtggagacgttggacttcatgacttccga
tacgtggtcactggtagacctaaaaaacagaaacactcttctaaagatgaacggatcagc
gatgcttcaaatattaatatgccaagtaccattggtgaacaaaacttcaatggaatgctt
tggtacataccaaaggctcactctgagagcgttaccaaaatatcttccatcccaaatacg
aatttgttcttgactggaagcaaagatggagacgtaaaactttgggatgcaaaaggagct
aaattagtttatcattggccgaagttgcatgatagacacacttttctgcaacccagctcc
cgtggttttggtgaagtagttcgggctgctgttactgatatacaagttatctcaagtgga
tttcttacctgtggtggagatggctctgtaaagctggttcagctgaaatga
DBGET
integrated database retrieval system
