Momordica charantia (bitter melon): 111016569
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Entry
111016569 CDS
T05045
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03082
ATP-dependent chromatin remodeling
mcha03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111016569
03083 Polycomb repressive complex
111016569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcha03036
]
111016569
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111016569
Histone modification proteins
HAT complexes
HATB complex
111016569
HDAC complexes
Sin3A-HDAC complex
111016569
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111016569
PRC2.2
111016569
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111016569
Heterochromatin formation proteins
Other heterochromatin formation proteins
111016569
Chromatin remodeling factors
NuRD complex
111016569
NuRF complex
111016569
NuRF complex (fruit fly)
111016569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
CAF1C_H4-bd
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_Gbeta
DSE1_N
WDR55
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
DNAI3_WD
Beta-prop_DCAF12
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
111016569
NCBI-ProteinID:
XP_022147703
UniProt:
A0A6J1D211
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MDSSQPQQQQQQPQPPQQQPQPVVKKKETRGRKPKPKDEKKDEQLAKKMKAQHQPSVDER
YTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVI
ANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHTDSP
DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLW
SIQDHITTSATDPAASKSPGSGGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVEDVTF
CPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITGSADN
SIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVG
KKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWR
MSDLIYRPEDEVLAELEKFKSHVIECAAKP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggactcttcccagccgcagcagcagcagcagcagccgcagccgccgcagcagcaacct
cagcctgttgtcaagaagaaggagacgcggggccgcaagccgaagcccaaggacgagaag
aaggacgagcagcttgcgaagaagatgaaggctcagcatcagccctccgtcgacgagcgc
tacactcagtggaagtctcttgttcctgttctttacgactggttcgccaaccacaatctc
gtctggccctctctttcttgccggtggggtcctcagcttgagcaagcgacgtataagaac
cgccagcgtctttatctttctgaacagactgatggtagtgttccgaatacactggtcatt
gcaaattgtgaagtggtgaaacctagggttgcagctgcagaacacatttctcagttcaat
gaagaagctcgctctccatttgtgaagaagtacaagactatcatacaccctggtgaggtt
aacagaattagggaacttccccagaatgctagaattgttgccacacacacggatagtcca
gatgtcctcatttgggatgttgaggctcaacctaaccgtcatgctgtccttggtgccaca
aattctcgcccagatttgattctgactggtcatcaagaaaatgcagagtttgctctagca
atgtgccccactgaaccttatgttctctctggagggaaggacaagttagttgttttatgg
agtatccaggaccatataacaacttcggccacagaccctgctgcttcaaaatcaccagga
tctggtggatctatcataaaaaaggcgggagagacaaatgataaagcttctgatgggcct
tctgttgggccacgaggagtttaccatggtcacgaggatactgttgaagatgtgaccttc
tgtccatccaatgcacaggagttttgcagcgtgggagatgactcttgtctaatattatgg
gatgcccgtgctggctctggcccagctgttaaggttgaaaaagcacataatgctgatctt
cattgtgttgattggaatcctcatgatgataatcttatcataacagggtcagcagataac
tctattcgtctgtttgatcgtcggaacctcacttctaatggagttggctcgcccatctat
aaatttgagggccataaagcagcggttctttgtgttcagtggtctccagataagtcatct
gtctttggaagttccgcagaggacgggctgttgaatatctgggattacgataaggttggt
aaaaagacagagcgagcaacaaggacacctgctgctcccccaggcttatttttccagcat
gctgggcacagggataaggtcgttgacttccactggaatgcatctgatccatggactgtt
gtcagcgtgtctgatgattgtgatacaactggtggaggaggaacattgcagatatggcgt
atgagtgatttgatttatcggccagaagatgaggtgttagctgagcttgaaaaattcaaa
tctcacgtaattgaatgtgctgcaaagccttag
DBGET
integrated database retrieval system
