Momordica charantia (bitter melon): 111016841
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Entry
111016841 CDS
T05045
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111016841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcha04131
]
111016841
Membrane trafficking [BR:
mcha04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111016841
Hops complex
111016841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_11
RPN1_RPN2_N
zf_RING_Vps8_fungal
zf_RING_Vps8
Nup54_57_C
zf-RING_Vps41
TXNDC16_2nd
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
111016841
NCBI-ProteinID:
XP_022148071
UniProt:
A0A6J1D495
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MESGRPVFTVDLLERYAAKGRGVVSCMAAGNDVILLGTSKGWVIRYDFGVGDSIDFDLSV
GRPGEQSIHSVFVDPGGSHCITTIVGGGGADTFYMHAKWSKPRLLTTLKGLVVNAVAWNR
QHITEASTKEVILGTENGQLFELAVDEKEKKEKYVKFLFELAELPEAFMGLQMETTGMLN
GMRYYVMAVTPTRLYSFTGTGSLETIFSSYLERAVHFMELPGEVPNSELHFYIKQRRAIH
FAWLSGAGIYHGGLNFGSQHRSSNGDENFVENKALLDYSKLSESAGTVKPSSMAVSEFHF
LLLIGNKVKVVNRISEQIIEELQFDQTAEATSRGILGLCSDATAGLFYAYDQNSVFQVSV
NDEGRDMWKVYLDMKEYTAALANCRDSLQRDQVYLAQAEGALESKDYLRAASFYAKINYI
LSFEEITLKFISASEQDALRTFLLRKLDNLTQDDKCQITMISTWATELYLDKINRLLLDD
DIASDGHSTEYQSIIKEFRAFLSDCKDVLDEVTTMKLLESYGRVEELVFFAGLKEQYEIV
VHHYIQQGEAKKALEVLQKPGAPAELQYKFAPELIMLDAYETVESWMITNNLNPRKLIPA
MMRYSGEPHAKNETHEVIKYLEYCVHRLHNEDPGVHNLLLSLYAKQEDDSALLRFLQCKF
GKGQENGPEFFYDPKYALRLCLKEKRMRACVHIYSMMDMHEEAVALALQVDTELAMAEAD
KVEDDEDLRKKLWLMIAKHVIELEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL
IDDFKEAICLSLEDYNKQIDQLKQEMNDATHGADNIRKDINALAQRYAVIDRDEDCGACK
RRILTVGRDYRMASSYASVAQMAPFYVFPCGHGFHAQCLIAHVTRCTDEAQAEYILDLQK
QITLLGGETRKDSNGSSAEESISSMTPADKLRTQLDDAIAGECPFCGELMIREISLPFIS
PEEAHQVSSWEIKPHNNLGGQRSFSLPA
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggaatccgggaggccggtgttcacggtcgatcttctagaaaggtatgcggccaaaggg
aggggagttgtcagctgcatggccgctgggaacgatgtcattttgttaggcaccagcaaa
ggttgggtcatccgctatgactttggagttggagactcgatcgattttgatctctctgtg
ggtcgtcctggagaacaatcaatccacagcgtatttgttgatccaggaggtagtcattgt
atcacaacaattgttggtggtggtggtgctgatactttttatatgcatgccaagtggtct
aaacctcgacttttaaccacattgaaaggtctcgttgtaaatgctgttgcctggaatagg
caacatataactgaagcttctacaaaggaggtcattcttggtactgaaaatggacaactg
ttcgaacttgcggtggatgagaaggaaaaaaaggaaaagtatgtaaagtttcttttcgaa
ttagcagaacttccagaagcttttatgggcttgcagatggaaacaactggaatgctaaat
ggaatgagatattatgtaatggctgttactccaacacgactgtactctttcactggaaca
ggatcgttggagactatcttctctagttatttggaacgtgcagtgcatttcatggaactt
cctggtgaggtacctaatagtgaactgcatttctatataaagcaaagaagagcaatacat
tttgcctggctttctggagctggcatttatcatggagggttaaattttggatcacaacat
cgttcttcaaatggagatgaaaattttgttgaaaataaggctcttttggactattctaag
ttgtctgaaagtgctggaacagttaaaccaagttccatggcagtgtctgaatttcatttc
ttgcttctgattggtaacaaggttaaggttgtaaatagaattagtgagcaaatcattgag
gaactccagtttgatcagacggcagaggcaacctcaaggggtatccttggtttatgtagt
gatgccactgctggtttattttatgcttatgaccaaaactctgtttttcaggtatctgtt
aacgatgaaggacgagatatgtggaaggtttatctggacatgaaagagtacactgcagca
ctagccaattgtcgcgactctcttcagagagaccaagtctatctggctcaggctgaaggt
gcattagaatccaaggattatctcagagctgcgtccttctatgctaaaatcaattacata
ttatcatttgaagagatcactctgaaatttataagtgcaagcgaacaggatgctttaaga
acttttctgttgcggaagcttgataatcttacccaggatgataaatgccaaataacaatg
atttccacctgggcaactgagttgtatttggataagataaaccgtctactcttggatgat
gacattgcatctgatgggcatagtacagagtaccaatcaatcattaaagaatttcgtgct
tttcttagtgattgcaaagatgtactggatgaagtcactacaatgaaactcttagagagt
tatggtcgcgtcgaggagctagtgttttttgctggtctaaaggagcagtatgaaattgtc
gtccaccattacattcagcaaggggaagcaaagaaagcattagaagtgcttcaaaaacct
ggagcgcctgctgaacttcagtacaagtttgccccagagcttatcatgcttgatgcatat
gagactgtcgagtcatggatgatcacaaacaatcttaacccaaggaagctgattcctgca
atgatgcgttattcaggggaacctcatgcaaagaatgaaactcacgaagtcatcaaatac
ttggaatactgtgttcatcgattacataatgaggatcctggagttcacaacttgctgctg
tctttgtatgccaagcaggaagacgacagtgcacttttacgtttcctgcaatgcaagttt
gggaaagggcaggaaaatggccccgagttcttctatgatccaaagtatgctttgcgtctt
tgtctcaaggaaaagagaatgcgagcctgtgttcatatatacagcatgatggacatgcat
gaagaagcagttgctcttgccctacaggttgatactgagcttgctatggctgaagcggac
aaggttgaggatgatgaagacttaagaaagaagctttggctcatgatcgccaagcatgtt
attgaactggaaaaaggaactaaaagggagaacataagaaaagcaatagcttttctaaag
gaaactgatggtttattaaagattgaggatattttgcccttctttccagactttgctctg
attgatgacttcaaggaggcaatttgcttgtcattagaagattataacaagcaaattgat
cagctgaaacaggagatgaatgatgcaactcatggtgccgataatattaggaaagatatc
aatgctcttgctcaaagatatgctgtaattgatcgagatgaagattgtggggcttgtaag
cgtagaatattaactgtgggcagagactaccggatggcttcaagctatgcatcagtagca
cagatggccccattctatgtctttccatgtggccatggattccatgctcaatgtttgatc
gctcatgttacacgttgcacagatgaagctcaagcagagtatatactggatctgcaaaag
caaattactctactgggtggtgagacaagaaaggactcgaatggaagctctgctgaagaa
tccatctctagcatgactcctgcagataagctccggacgcagttggatgatgccatagcg
ggagagtgcccattttgtggcgagttgatgatccgcgagatctctttgccttttatctca
ccggaagaagcgcatcaggtcagttcatgggaaattaaaccccataacaaccttggagga
caacggagcttttctttacctgcgtga
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