Momordica charantia (bitter melon): 111016931
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Entry
111016931 CDS
T05045
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111016931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcha03041
]
111016931
03009 Ribosome biogenesis [BR:
mcha03009
]
111016931
Enzymes [BR:
mcha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111016931
Spliceosome [BR:
mcha03041
]
Complex A
U1 snRNP components
U1 related factors
111016931
Complex B
111016931
Ribosome biogenesis [BR:
mcha03009
]
Eukaryotic type
Pre-60S particles
Helicases
111016931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
111016931
NCBI-ProteinID:
XP_022148206
UniProt:
A0A6J1D4P2
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MSRYDGRSSDPTSYRDRRSDSGFGGSTGYSSSVRSSSSKSDYYASEAPRKVDLDGLPPFE
KNFYVEAPSVAAMTEREVEEYRQRREITIEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFA
EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY
NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI
TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISILEEAGQKVSPELAAMGRG
APPPPSGHGGFRDRGRGYGGGRPWS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctacgacggccgctcctccgaccccacttcttaccgcgaccgtagaagtgat
tcaggttttggtgggtctacaggctatagcagttcagtgcggtcctcgtctagcaagagt
gattattatgcttctgaggccccaagaaaggtggatttagatggattgcctccttttgag
aagaacttctacgtcgaggcaccatcagtggcagcaatgacagagagagaggttgaggag
tatcgacaaaggagggaaattactatagaaggtcgcgatgttccaaaaccagtcaagtct
ttccgtgatgttggatttcctgattatgtcatgcaagaaattgctaaagctggcttcgcc
gaacctactcctattcaatcccaaggatggccaatggctctaaaaggtcgagatctcatt
ggtattgctgaaacggggtcagggaagacccttgcataccttttgcctgcaattgtccat
gtcaatgcccaaccaatcctttctccaggagatggtccaattgtgttagttttagctcct
actcgtgaacttgcagttcaaatacaacaagaagctacaaaatttggtgcatcatcgaag
atcaagaacacatgcatatatggtggcgttcccaaaggacctcaagtgcgtgatcttcag
aaaggagttgaaattgtaattgctacaccgggaaggctgattgatatgatggagtcacat
catacaaacttgcgaagggttacttaccttgtactggacgaggctgatcgaatgctagat
atgggatttgatcctcaaatacgaaaaattgtttcacagattcggcctgatcgacaaact
ttgtactggagtgctacctggccgaaagaagtggaacaactggcaaggcagtttctttac
aatccatacaaggtcatcattggttctccagatctgaaagctaatcatgccatacgccaa
catgttgatattgtctcggaaaatcagaaatataacaaattggtgaaattgctagaggat
atcatggatgggagtcgaatcctgatctttatggataccaagaaaggatgtgaccaaatt
acacgacagcttcgcatggatggttggcctgcactttcaattcatggtgataagagtcaa
gcagaaagggattgggtcctctcagaatttcgatctggcaagagtcctataatgacagct
acagatgttgctgctcgtggtttagatgtgaaggacgtgaaatatgtaataaattatgac
tttcctggatctcttgaggattacgttcaccggattggtagaacgggaagagctggagca
aaaggaactgcatacactttcttcactgctgctaatgccagattcgcaaaagaacttata
tcgattcttgaagaagctggacagaaagttagtcctgaactggcagcaatggggcgtggt
gcgcctcctcccccctcaggtcatggtggatttcgagatcgtgggaggggttatggtggt
ggacggccatggagctga
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