Momordica charantia (bitter melon): 111017011
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Entry
111017011 CDS
T05045
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111017011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111017011
03036 Chromosome and associated proteins [BR:
mcha03036
]
111017011
Transcription machinery [BR:
mcha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111017011
Coactivators
SAGA/TFTC/STAGA complex
111017011
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111017011
STAGA complex
111017011
TFTC complex
111017011
SAGA complex
111017011
SLIK complex
111017011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
111017011
NCBI-ProteinID:
XP_022148333
UniProt:
A0A6J1D3U0
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MADSTSSPRPVQQNPMDPSPPPPQPQPQVQPSTAAIPQNSSNPLNSSVNPPIPSPSALAQ
SPSIDHLHPLSQISSPPLSHISLPQNPQQQQQLSPAVGLDYQQKPLQQQQQQQQQQQQQQ
QHSQQLVQQPQNANAMTNFQLQQALQRSPSMSRMSQLQQQQQQFGMMRQQTGLYSQMNFG
GSSTNQQQQPQQQPNQQQQMGSGNLSRSALIGQGNHLPMLSGAAAAQYNLQSQLLASSKQ
KAGLVQGPQFQSGNSHGQPLQGMQAMGMMGSMNLSSQLRANGTLASFAQQRINQGQIRQQ
LSQQSSLTSPQVQNLPRMSNLAFMNQQLTSLAQNGQQTMLQNSLPQQQWLKQMPSMSSPG
SPSYRLQQRQQQVLLQQQLPSSTQLHQNSMSLNPQQFSQLVQPQSSMGHQQLHQQQQQQQ
QQQQQSQQQQPQQQQLQQQPLHQQQQLLQQPSPQQALQPVLHQHQHQHQHQQHSPRIPGI
AGQKSLSLTGSHPDATASGNSTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLDPEV
EDLLLEFADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHN
KNLSSDLHKKRLDMIRLLKEASRVETNVNSPREIVRQGVGISIGANTLTRPSPSSEQLLS
QTTGSQLLQQITRF
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagtacttcgtctccgagaccggtccaacagaacccgatggacccttcgcca
ccgccgccgcagccacaaccgcaagttcaaccttcaacggccgctattccacagaattca
tcaaatcctctcaattcctctgtaaatcctcctattccatccccctctgcgctcgctcaa
tcaccttcaattgaccacttacatccgctctctcaaatctcttcccctcccctttcgcac
atctccctcccgcaaaatccgcagcaacagcaacaactgagccctgcggttggattagac
taccaacagaagcctctacagcagcagcagcagcagcagcagcaacaacaacagcagcag
caacattcgcagcaattagtgcaacaaccccagaatgcgaacgcgatgacgaatttccaa
ctccagcaggccttacaacggtccccttcgatgtctcggatgagccaattgcaacagcag
cagcagcagtttgggatgatgagacagcaaacggggctttatagtcagatgaattttggt
gggtcttctacaaatcagcagcagcaaccgcagcaacagcctaaccaacagcagcaaatg
ggttctgggaatctgtcacggtctgcgttaattggtcagggtaaccatttgcccatgttg
tctggggcggctgctgctcaatataacttgcagtcacaattactggcttcgtcaaagcag
aaagccggtttagtccagggtccgcaatttcagtcaggtaactctcatgggcaacctttg
caaggaatgcaagcaatggggatgatgggatcaatgaatttgagctcacaactaagagct
aatggtacccttgcgtcatttgcccaacagagaataaatcaaggtcaaataaggcagcaa
ttgtctcaacaaagttcactcacctctccacaggttcagaacttaccgagaatgtcaaat
cttgcatttatgaatcagcaattgactagtttggctcagaatgggcagcaaactatgttg
cagaactctttgccacagcaacagtggctgaagcaaatgccatcaatgtctagccctggc
tcaccttcatatcgtcttcaacagaggcagcaacaggtcttgttgcagcagcaactgcct
tcatctactcaattgcatcaaaactccatgtccttgaaccctcaacaattttctcagctt
gtacagccacagtcgtccatgggacatcaacagctgcatcaacagcaacagcaacagcaa
cagcaacagcagcaatcacaacagcagcaaccacaacaacaacagctacagcagcagcca
cttcatcaacaacaacagcttcttcaacaaccatcaccacagcaagcgctgcaaccagta
ttgcatcagcatcagcatcagcatcagcatcagcagcattctcctaggatacctggaatt
gcaggccagaaatctcttagtttgactggatcgcatccagatgctactgcgtctggcaat
agtacacctgggggaagttcaagccaagggacagaagctgccactcaagtccttgggaag
agaaagatacaagatctggtttcacaggtagatccacatggaaagttggaccctgaagtt
gaagatcttctattggagtttgccgatgattttattgattcggttactacatttgcctgc
agtctggcaaaacatcggaaatcttcaactttagaatccaaggatttattgctacactta
gagaagaattggcaattgaacgttcctggatattcaagtgacgagtggaagaaccacaac
aaaaatttatcaagtgatctccacaagaaacgtctggacatgatacgcctattgaaggaa
gcctcccgtgtcgaaacaaatgtaaacagtccaagagagattgtcagacaaggggtcgga
atctccattggtgccaacactctaacgaggccttcaccgagttcagaacaactactgtcg
cagacgactggttcacagctgctgcagcaaataacgcggttttga
DBGET
integrated database retrieval system
