Momordica charantia (bitter melon): 111017217
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Entry
111017217 CDS
T05045
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111017217
03041 Spliceosome [BR:
mcha03041
]
111017217
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111017217
Spliceosome [BR:
mcha03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111017217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
111017217
NCBI-ProteinID:
XP_022148596
UniProt:
A0A6J1D5V9
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPVPSGNLPPGFDPSTCRSVYVGN
IHSQVTEPLLQEVFGSTGPVESCKLVRKEKSSYGFIHYFDRRSAAMAIFSLNGRHLFGQP
IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYQSCSDARVMWDQKTGRSR
GFGFVSFRTQQDAQSAINDLTGKWLGNRQIRCNWATKGAGTNEDKQSSDVKSIAELTNGS
SEDGKETVNSDAPENNPQYTTVYVGNLAPEVTQVDLHRHFHALGAGVIEEVRIQRDKGFG
FVRYSTHSEAALAIQMGNTQSFLCGKQIKCCWGSKPTPPGTISNPLPPPAAAPIPGLLAT
DLLAYERQLAMSKMGGVHALMHPQIPHPLKQAAMGMGAAGSSQAIYDGGFQNVAAAQQQL
MYYQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcagagattgaagcagcaacagcaacaagctttgatgcagcaagctttgctt
cagcaacagtctctttaccaccctggtctattagctccccctcagcttgaacctgttcca
agtggaaatttgccgcctggttttgatccaagtacttgtcgtagcgtgtatgtggggaat
atacattcacaggtaacagaaccacttcttcaagaggtttttgggagtacaggccctgtt
gaaagctgcaagcttgtcagaaaggagaagtcatcctatggatttattcactattttgat
cgcagatcggctgctatggctattttctcacttaatgggaggcatttgtttgggcagcct
atcaaagtaaattgggcttatgctagtggtcagagggaggatacatcaggtcattttaac
atttttgtgggtgatctgagtcctgaagttactgatgctacattgtttgcatgcttctct
gtttaccaaagctgttctgatgctagagttatgtgggatcagaagactgggcgttcccgg
ggatttgggtttgtctcttttcgcactcaacaggatgctcaaagtgcaatcaatgacctg
accggtaagtggcttggaaatagacagattcgttgcaactgggcaacaaaaggtgctgga
accaatgaagacaagcagagctcagatgttaaaagcattgcagaacttacaaatgggtca
tctgaagatggtaaagagactgtaaatagtgatgccccagagaacaatcctcaatacact
actgtttacgttggcaatcttgctccagaggtcacccaggttgatcttcatcgccacttc
catgctcttggggctggtgtgattgaggaggttcgcatccagcgtgataaagggtttgga
tttgttagatacagtactcattccgaggcagctttggctattcagatgggaaatacgcag
tcatttctttgtggcaaacaaatcaagtgctgttggggaagcaagccgactccacccggt
accatctccaacccacttcctccccctgcagcagcacctatcccaggactcttggcgacc
gaccttttagcttacgagcggcaactggcaatgagcaaaatgggcggtgtgcatgccctt
atgcaccctcaaataccacaccctctaaagcaggcagcaatggggatgggtgctgcgggc
tcaagtcaggctatatatgatggtggtttccagaatgtggccgcagcccagcagcagctg
atgtattaccagtaa
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