Momordica charantia (bitter melon): 111017721
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Entry
111017721 CDS
T05045
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03013
Nucleocytoplasmic transport
mcha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111017721
03015 mRNA surveillance pathway
111017721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcha03019
]
111017721
03041 Spliceosome [BR:
mcha03041
]
111017721
Messenger RNA biogenesis [BR:
mcha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111017721
Spliceosome [BR:
mcha03041
]
Complex C
Other components
EJC/TREX
111017721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
111017721
NCBI-ProteinID:
XP_022149257
UniProt:
A0A6J1D7F9
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MGSNAAAADKMEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRSFVPNGPRRG
FLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGKDAMKDTSREETSVSDTAYQN
DGKQNHLRQSGSFNRVDGNKRAARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLG
TLEKFRKEDKQLSGSEAFMKRSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRAR
VAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHR
LEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVEDNGRRGEEAAKPEADGGASP
NADNTVQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtaacgccgccgccgccgataaaatggaggaggatctccgaaaggagatcgat
gagcttcaacgtcaacaacgggagattacagaacggcttcgtgatcctcgcggactccgg
agagggggctttccgggacctgggccgagaagtttcgtccctaatggacctcgtcgggga
tttcttcgacctgcggaaaggatcgatgctgaagaccagcctcctgctaagcggcgacta
tcatctgctgttgttaagatggaggaggatggggagataaatgaagaagccgatgggaag
gatgcaatgaaggatacatcacgggaagaaacttcagtgagtgatacagcctaccagaac
gatgggaaacaaaatcatttgcggcagagtggttcatttaatagagtggatggaaataaa
agagcagctaggatggatttcgaagttccagctgcagagcacattccaagggtgctgcct
aagaatgaggatcctagcttagttagcaggaacaagagaatgctgggtcagcttttggga
acattagagaaattcaggaaagaagataagcaactttcaggaagtgaagctttcatgaaa
agatctgattccttgcaaagagctgagcaaagagcacgagaggaaagtgaaagattgagg
caacaagagcgtgagcaaattgcagagaaacggaaaagagatctgatgctcagagctcgc
gtggctgccaaggcagaagagaagaagttggaattactttttcttcgatggagcgagcac
cataagaaacttagcaattttataaggacaaagactgaaccttcaattcattacttgcca
aataaaccattggacgaggatgcaaccttggttgagcagcgaaaagaggaggcttttgcg
gaatggaaagcctccagaagggaggagttatccgaatatcagaaacagattggagaacag
tatattgcaaatgtcgagaaagacttggagaggtggcagaatgcaaggagagcaagaaaa
ggaaataatgatgtatcaaatttgcaggaaaccatggacaaagaattggacacccataga
cttgagcatggtcccaagaaaaggaacatcccaggtggtagcaacaatgaggacgaggac
gatgtggaagatattaacgctggagaagacgacatgatagacgacgtacttggtgtcgaa
gataatggacgcagaggcgaggaagcagcgaaacccgaagctgatggcggcgcgagccca
aatgctgataatactgtgcagtag
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