Momordica charantia (bitter melon): 111018210
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Entry
111018210 CDS
T05045
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111018210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcha03009
]
111018210
Ribosome biogenesis [BR:
mcha03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111018210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_VPS8
WD40_RFWD3
NBCH_WD40
Beta-prop_EIPR1
PEP5_VPS11_N
WD40_like
VPS8_N
Beta-prop_IP5PC_F
Beta-prop_SCAP
Nbas_N
Beta-prop_DCAF12
VID27
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
111018210
NCBI-ProteinID:
XP_022149908
UniProt:
A0A6J1D810
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MGIFEPYRAIGYITNSVPFSVQRLGTETFVTVSVGKAFQVYNCAKLNLVLVGPQLPKKIR
ALASYREYTFAAYGSDIAVFKRAHQVANWSSHNAKVNLLLLFGDHILSVDINGNMFIWAF
KGIEDSLSPVGQVILDGQFSPSCIMHPETYLNKVILGSLEGSLELWNISSKKKLYEFKGW
NSSVCCCVSSPALDVVAIGCADGKVHVHNIRYDQELFSFTHSTRGSVTALSFSSDGQPLL
ASGGSSGVISIWNLEKRRLQSVIREAHDNSIVSLHFFANEPVLMSSSVDNSIKMWIFDTT
DGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKR
AKKLKLKEEEIKLKPVIAFDCAEIRERDWCNVVTCHVDTPQAYVWRLQNFVLGEHILKPC
SENPTPVKACAISACGNFAFLGTEGGWIERFNLQSGASRGTYLDTLEGKTSAHVGEVVGL
ACDSTNTHLISAGVRGDIKVWNFKERDLKSRLEIGSSVVKIVYHRVNGLLAIVADDLVIR
LFDVVALRVVRKFEGHTDRITDLSFSEDGKWLLSSSMDGTLRIWDVILARQIDALQVDAS
ITAFSISPNMDILATTHVDQNGVYLWVNQLMFSGSSNVDTFASGKDVVNVKLPSVSSTEG
IEFEDREEDPSNLPESKVPSGFHISSQQIPDLITLSLLPRSQWQSLINLDIIKVRNKPIE
PPKKPEKAPFFLPSLPSLSGEILFKPSESANTETEKGVDHEQKKSDLSSSQFSQLLESSS
EIQNFSAFTDYIKGLSPSTLDLELRMLQIIDDADHQEPEKRPELISIELLLDYFIHEITC
RNNFEFIQALIRLFLKIHGETIRCQSTLQEKARKLLDIQASVWQGLDKLFQSSRCMVTFL
SNSQF
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgggaatctttgaaccgtacagagcaattggttacattacaaacagcgtccccttctct
gtgcagagactcggaaccgaaaccttcgtcaccgttagcgttggcaaagcctttcaggtt
tacaattgcgcgaagttaaacttggtgctcgttggccctcaattgccaaagaagattcga
gctcttgcctcgtatcgtgagtacacgtttgctgcttatgggtctgatattgcagttttc
aagcgtgcccaccaggttgcaaattggagtagccataatgccaaggtcaacttgttgctg
ttgtttggagatcacatcctaagtgtcgacattaatggaaatatgttcatttgggctttt
aaaggaattgaagatagtctttctccagtgggacaagtcatcttagacggacaatttagt
cctagctgtataatgcatccagagacgtatctaaacaaagttattcttggaagcctagaa
ggttctttggagctttggaacatcagctccaagaaaaaactttacgagttcaagggatgg
aattcatctgtatgctgctgtgtttcatctcctgctctcgatgttgttgccattggctgt
gctgatggaaaggttcatgttcataacattcgttatgatcaagaattgttttcattcacc
cactcgacacgaggatctgttactgccttatcttttagctcagatggacagcctcttcta
gcgtctggaggttcatcaggtgttattagcatatggaatcttgagaagagaaggcttcaa
tcggtcattagagaagctcatgataattcaatagtttcacttcacttttttgccaatgaa
ccagtactaatgagttcttcagtagacaactccatcaaaatgtggatttttgatacaaca
gatggagatcctcgtttgttacgctttcgaagtggccatagtgctcctcctctttgcata
aggttttatgcaaatgggagacacattttatctgctggtcaggatcgggcctttcggctt
ttctctgtaatccaggatcagcaaagtagagagctttctcaacgtcatgtggcgaaacgt
gcaaagaaactaaaactgaaggaagaagaaataaagttgaagcccgtcatagcttttgat
tgtgctgaaattagagaacgggactggtgcaatgtggttacatgtcatgtggatactccg
caagcatatgtatggagactccaaaactttgttcttggtgaacatatcttgaaaccatgc
tcagaaaacccaactccggttaaggcttgtgcgattagtgcatgtggaaattttgccttc
ttgggaacagaaggtggttggattgagcgattcaatcttcaatctggtgctagtagaggt
acttacctggacacattagaaggaaaaacgtctgcacatgttggagaagttgttggtctt
gcttgtgattctacaaatacccaccttataagtgcaggagttcgtggagatataaaggtt
tggaatttcaaggagcgtgatctgaaatctagattggaaattggtagttctgttgtgaag
attgtctatcatcgagtaaatggacttttggcaattgtagctgatgatttggttatccgt
ctgtttgatgttgtggctttaagagtggttcgtaaatttgaaggtcatacagatcggata
acagatttgtctttcagtgaggatggaaaatggcttttatcatctagtatggatggaact
cttagaatttgggatgttattttagcaaggcaaatagatgcactacaagtcgatgcttca
atcacggcgttttctatttctccaaatatggatattttggctaccacacatgtagatcaa
aatggagtctacctttgggtgaatcaattaatgttttctggctcatcaaatgtggatacc
ttcgcgagtgggaaggatgttgttaatgttaaattgccatcagtatcctcgacagaaggt
attgagtttgaagatcgcgaagaggatccttcaaatctacctgaatctaaagttccatca
ggttttcacatctccagccagcaaatcccagatttaatcaccctctcactgttgcccaga
agccagtggcagagcttgatcaatttggacataattaaggtccgtaataaaccaattgaa
cctccaaagaaacctgaaaaggctcccttcttccttccctctctcccttctctctctgga
gaaatactatttaagccttctgagtcagcaaacacagagacagaaaagggggtcgatcac
gaacagaaaaaatccgatctttcatcatcccaattttcgcagcttctcgagtcttcttct
gaaatacagaacttctctgcctttactgattatataaaaggtttatctccatcaacattg
gatttggagcttcgcatgcttcaaattatagatgatgccgatcatcaagaacctgaaaag
agacctgaacttatttcaatcgaactgcttctcgattacttcatacacgaaattacttgc
cgcaacaattttgagttcatacaagccctaatcagattgttcctgaagattcacggcgaa
acaattcgttgccagtcgacgttgcaggagaaggcaaggaaactcctagatattcaggcc
tcagtatggcaaggtttggataaattattccaatcctctagatgcatggttacttttctt
agcaattcacagttttag
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integrated database retrieval system
