Momordica charantia (bitter melon): 111018212
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Entry
111018212 CDS
T05045
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
mcha
Momordica charantia (bitter melon)
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcha03021
]
111018212
03036 Chromosome and associated proteins [BR:
mcha03036
]
111018212
Transcription machinery [BR:
mcha03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111018212
Chromosome and associated proteins [BR:
mcha03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111018212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
Spt6_S1
Tex_central_region
HHH_9
SH2
HHH_3
S1
Motif
Other DBs
NCBI-GeneID:
111018212
NCBI-ProteinID:
XP_022149910
UniProt:
A0A6J1D721
LinkDB
All DBs
Position
Unknown
AA seq
1622 aa
AA seq
DB search
MGKAVISDEEDEVELDDREPLDGEDVDRHNMEDDEDEDDEEGQDEYEKDGFIVDDIDEED
EEDVEEREDSDEERQKKKKRKKKEEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQR
DNVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGD
EDEMADFIVDEEVDEDGAPVRRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKR
ELDSHEWHEKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLE
DETSWIHGHLANGTNSLFGTASGQDLSVVKDDILRFLDLVHIQKLDIPFITMYRKEEILS
LLKDTQHEAVDDQGKNEKAPTLKWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEES
RRIYDETRLSLNNQLFESVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKR
KSLYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFE
TPQAVLKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKW
LREKPLSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLW
NEQRKLILQDALSGFLLPSMEKEARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDI
SSDEEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQE
RVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDES
LPRLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENF
MTPDEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAG
SIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQEL
AKDVFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRE
LMHGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTG
MLMKEDFADDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRD
LDPYYHEDRSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGES
IVRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDE
VMDRYVDPLVSHLKAMLSYRKFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFI
LTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMV
PMRSPATGGSSAASAGSPWGGSSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHP
SGLPRPYGGRGRGRGSYNNNRGNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQN
SPGKEAFPGGWGSGGSGGGGNGWSDSGGDGGGGGGGGWGGSGGNSKGNWGGSGASNSGGW
GS
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagcggtgatatccgacgaagaagatgaggttgaattggacgaccgggaaccg
cttgacggcgaggacgttgacaggcataacatggaggacgatgaagacgaagacgatgaa
gaaggacaggatgagtatgaaaaggatggtttcatagttgatgatattgatgaagaagat
gaagaagatgtagaggagagggaagacagtgatgaggaaaggcagaagaagaagaaaagg
aagaaaaaggaggaatatgtgcttgatgaagatgactatgaactccttgaggacaacaat
attactattcaacggcccaagggaagcaaaaagttcaagaggcttaaaaaagctcaaaga
gacaacgtggagccttctgggttttctgatgatgaggattttgttgaaagcagtagaggc
ggacgaactgccgaggaaaaacttaaacgtagtttgtttggtgatgatgaagctccactt
gaggacattgcggaagaggaggaacaacctgaagaggaagaagacgttgacattggagat
gaggatgaaatggcagatttcattgtagatgaagaagttgatgaagatggggctcccgta
aggaggaagaagttaaagaaaaaaaagtccagacaagcacctggtgtctcatcaactgct
ttgcaggaggcacatgaaatttttggggatgttgatgagcttcttcagcttcgcaagaga
gaattggatagtcatgagtggcatgaaaagagattagaagatgaatttgaacccattgta
atttctgagaagtatatgacagaaaaagatgaccagataagggagattgacatacctgaa
agaatgcagatttcagaggaaagcacgggtcctcctcctatggatgagattagtctggag
gatgagacctcatggatacatggtcatcttgcaaatggaacaaactctctgttcggcaca
gccagtggacaagacctatctgtagtaaaggacgatattctgaggtttctggatcttgta
catatccaaaaattagatataccattcatcaccatgtataggaaggaggagattctaagc
ttgttaaaagatacacaacatgaagccgttgatgatcagggtaaaaatgaaaaagcaccc
acattaaagtggcataagatactttgggcaatccaagaattggacaaaaagtggctgctt
cttcaaaagcgaaaaaatgcacttcaatcatattacagtaagcgatttgaggaggagtca
cgtaggatttatgatgaaactagactctctttgaataatcaactttttgagtcggtcatg
aaatctctcaaggcagctgaatcagagagggaggtagatgatgttgactcaaagtttaat
ttgcattttccccctggtgaagttggtgttgatgaaggacagttcaaaaggcctaagagg
aaatcactgtacagtatttgtagtaaggccggcttatgggaggttgcaggcaagtttggc
tatagctctgagcaatttgggttgcagctctccttagaaaagatgagaaatgatgagttg
gaggatccaaaggaaacacctgaagagatggcatcaaactttacttgtgcgatgtttgag
actcctcaagctgtactcaaaggagccaggcatatggcagctattgagattagttgtgaa
ccttgtgtaaggaagcatgttaggagctactttatggactatgccgtgatatcaacaagt
cctacgccagatggaaatgtagcaatagattcctttcatcagttttcagttgttaagtgg
ctccgtgaaaagccattgagtagatttgaggatgcacaatggctccttattcagaaggct
gaagaagaaaaacttttgaatgtcactctcaagctacccgaaaagcatctaaataagttg
ataactgattttaatgaatattatctcagtgatggtgttagcaaatctgctcagctatgg
aatgagcagagaaagttaatattgcaggatgcactttctggttttcttctgccttccatg
gagaaagaagcaagatcgctgatgaatagtagagcaaaaaactggttacttatggaatat
ggaaagagtttgtggaataaaatatctgttggtccatatcaacacaaagaaaatgatatt
agttctgatgaagaagctgccccaagggttatggcatgctgttggggtcctggaaagcca
gctaccacctttgtgatgttagattcatcaggcgaggtgctggatgtgctttacactgga
tctctcaccctacgttctcaaaatgtgaatgaccaacaacgcaagaaaaatgatcaagag
cgagttttgaaattcatgacagaccatcaaccacatgttgttgttctaggagctgttaat
ttatcttgtacccgattgaaagatgacatttacgagattatctttaagatggtggaggag
aatcctagagacgttggacatgagatggatggattaagcattgtatatggtgatgagtcc
ctcccacgtctgtatgaaaattctcggatttcctctgaccaattgcaagggcaatcaggc
attgtgaagcgtgctgttgctcttggacgttatctgcaaaatcctctggctatggttgcg
acactttgtggtccaggaaaggagatcttatcttggaaactaaatcctttggagaatttt
atgaccccagatgaaaaatatgggatggtcgaacaggttatggtggacgtgaccaaccag
gttggcctggacactaatttggctataagccacgaatggttgttcagcccattgcaattt
atagctggacttggacctaggaaggctgcttctttgcagagatccttggtgagggctgga
tcaattttcacacgtaaagactttgttacggcacatggtcttggtaaaaaggtatttgtt
aacgcagttggtttcttgcgtgttaggcggagtgggttggctgcaagcagcagccaattt
attgatttattggatgatacaagaattcatcctgaatcttatgctctggcgcaagaatta
gcgaaagatgtttttgatgaagatgttaaaggtgatgctaatgatgatgaggatgcagag
atggccatagagcatgttagagaccggcctcatttactgaggactcttgatgttgatgaa
tatgccgcgagcaagaaacgggaagataaaagagagacttttcttgacataaaaagagaa
ctgatgcatggttttcaggattggcgtaagcaatatgaagagcccagtcaggatgaagag
ttttatatgatatctggtgaaacagaggatacccttgcggaagggagaattgtccaagct
acagtccgcaaggtacaaggtcaaagagcaatttgtggtcttgaatctggattgactggg
atgcttatgaaagaagattttgctgatgattctagagagatttctgacttatctgatagg
ttgcatgagggggatattgttacttgcaagatcaaatcgattcagaaaaataggtatcag
gtcttccttgtttgtaaggagagtgagatgagaagtaaccgaaaccagattactcgagat
cttgatccctattatcatgaagatcgaagcagcctacagagtgagcaagaaaagtctcgg
aaagaaaaggaactcgcgaaaaagcatttcaagccaagaatgatagttcatcctcgcttc
aagaatataacagcagatgaagcaatggagttcttgtctgacaaggatcctggtgaaagt
attgttcgaccgagttcccgtggaccttcttttttgactttgacacttaaaatttatgat
ggagtatatgctcataaagatatagttgaaggtggaaaggagcataaagacatcacaagc
ttgctgcgcatcgggaagaccttgaaaattggggaggacacttttgaagatttggacgag
gtgatggatcggtacgttgatcccttagtttcccacttaaaggcaatgcttagttatcgc
aagttcaggaggggcacaaaagcagaagttgatgaacttatgaggattgagaagtcagaa
tatccaatgagaatagtttatggttttggaatttctcatgagcatccgggtacattcatt
ttgacatacatacgaagtacaaatccacaccatgagtatattggtctctacccaaaggga
tttaaatttcggaaaaggatgtttgaagatattgataggcttgtggcctattttcaaagg
cacattgatgatccccagaatgactcggcaccatcaatcagatcagttgctgcaatggta
ccaatgcggagccctgcaactggtggctcttcagcagcatctgcaggtagtccttggggt
ggttcatcacatgatggtggctggagaagccagtcatctgacagggatcgttcttctact
cctgggtctagaacagggcgaaatgacaacagaaattctggtggtcgtgatggacatcca
agtggtctacctaggccatatggtggacgtgggcgtggtcgaggctcgtataataataat
agagggaataacgtgaacaatgagaggcaagattctagctatgatggctccagatgggat
tcaacttccaaggatggggatgatggattaagcaacttcccaggagctaaaattcaaaat
tcaccaggcaaagaagcctttcctggtggctggggctctggtgggagtggtggtggtggt
aacggatggagcgatagcggtggcgatggtgggggcgggggcggaggcggttggggtgga
agtggtgggaattccaaaggaaattggggtggttctggtgcaagtaacagtggggggtgg
ggttcttaa
DBGET
integrated database retrieval system
